RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 SRP54P61011 504 aaKnown RBP6.14□□□□□ -1.43
CNOT1-204ENST00000563130 ETF1P62495 437 aaKnown RBP6.14□□□□□ -1.43
CNOT1-204ENST00000563130 TAF1AQ15573 450 aaPredicted RBP6.14□□□□□ -1.43
CNOT1-204ENST00000563130 ZDHHC20Q5W0Z9 365 aa6.14□□□□□ -1.43
CNOT1-204ENST00000563130 CCDC137Q6PK04 289 aaKnown RBP6.14□□□□□ -1.43
CNOT1-204ENST00000563130 DNAJC14Q6Y2X3 702 aaPredicted RBP6.14□□□□□ -1.43
CNOT1-204ENST00000563130 DGLUCYQ7Z3D6 616 aa6.14□□□□□ -1.43
CNOT1-204ENST00000563130 GLT6D1Q7Z4J2 308 aa6.14□□□□□ -1.43
CNOT1-204ENST00000563130 LINC00523Q86TU6 105 aa6.14□□□□□ -1.43
CNOT1-204ENST00000563130 OR4C6Q8NH72 309 aa6.14□□□□□ -1.43
CNOT1-204ENST00000563130 RHBDD1Q8TEB9 315 aa6.14□□□□□ -1.43
CNOT1-204ENST00000563130 SETD7Q8WTS6 366 aaKnown RBP6.14□□□□□ -1.43
CNOT1-204ENST00000563130 SLCO2A1Q92959 643 aa6.14□□□□□ -1.43
CNOT1-204ENST00000563130 TSACCQ96A04 125 aaPredicted RBP6.14□□□□□ -1.43
CNOT1-204ENST00000563130 MAGOHBQ96A72 148 aaKnown RBP6.14□□□□□ -1.43
CNOT1-204ENST00000563130 HIC2Q96JB3 615 aa6.14□□□□□ -1.43
CNOT1-204ENST00000563130 CLPBQ9H078 707 aa6.14□□□□□ -1.43
CNOT1-204ENST00000563130 ZNF395Q9H8N7 513 aaPredicted RBP6.14□□□□□ -1.43
CNOT1-204ENST00000563130 IL26Q9NPH9 171 aa6.14□□□□□ -1.43
CNOT1-204ENST00000563130 MRPL40Q9NQ50 206 aaKnown RBP6.14□□□□□ -1.43
CNOT1-204ENST00000563130 EIF2B3Q9NR50 452 aaKnown RBP6.14□□□□□ -1.43
CNOT1-204ENST00000563130 RAB6BQ9NRW1 208 aa6.14□□□□□ -1.43
CNOT1-204ENST00000563130 SPASTQ9UBP0 616 aa6.14□□□□□ -1.43
CNOT1-204ENST00000563130 KLQ9UEF7 1012 aa6.14□□□□□ -1.43
CNOT1-204ENST00000563130 APOBEC3BQ9UH17 382 aaKnown RBP6.14□□□□□ -1.43
CNOT1-204ENST00000563130 TMPRSS11EQ9UL52 423 aa6.14□□□□□ -1.43
CNOT1-204ENST00000563130 ARL5AQ9Y689 179 aa6.14□□□□□ -1.43
CNOT1-204ENST00000563130 PRSS38A1L453 326 aa6.14□□□□□ -1.43
CNOT1-204ENST00000563130 CTAGE9A4FU28 777 aa6.14□□□□□ -1.43
CNOT1-204ENST00000563130 NEMP2A6NFY4 417 aa6.14□□□□□ -1.43
CNOT1-204ENST00000563130 TTLL8A6PVC2 850 aa6.14□□□□□ -1.43
CNOT1-204ENST00000563130 AGAP14A8MT82 685 aa6.14□□□□□ -1.43
CNOT1-204ENST00000563130 LMO7DNF2Z398 122 aa6.14□□□□□ -1.43
CNOT1-204ENST00000563130 AQP9O43315 295 aa6.14□□□□□ -1.43
CNOT1-204ENST00000563130 MAN1A2O60476 641 aa6.14□□□□□ -1.43
CNOT1-204ENST00000563130 PHF2O75151 1096 aa6.14□□□□□ -1.43
CNOT1-204ENST00000563130 RASGRP1O95267 797 aa6.14□□□□□ -1.43
CNOT1-204ENST00000563130 IVLP07476 585 aa6.14□□□□□ -1.43
CNOT1-204ENST00000563130 LPOP22079 712 aaPredicted RBP6.14□□□□□ -1.43
CNOT1-204ENST00000563130 GRIA1P42261 906 aa6.14□□□□□ -1.43
CNOT1-204ENST00000563130 MAGEA6P43360 314 aa6.14□□□□□ -1.43
CNOT1-204ENST00000563130 ZNF140P52738 457 aaPredicted RBP6.14□□□□□ -1.43
CNOT1-204ENST00000563130 CDH17Q12864 832 aa6.14□□□□□ -1.43
CNOT1-204ENST00000563130 PTPRCAPQ14761 206 aa6.14□□□□□ -1.43
CNOT1-204ENST00000563130 TRIP6Q15654 476 aaKnown RBP6.14□□□□□ -1.43
CNOT1-204ENST00000563130 INAVAQ3KP66 663 aa6.14□□□□□ -1.43
CNOT1-204ENST00000563130 HS1BP3Q53T59 392 aa6.14□□□□□ -1.43
CNOT1-204ENST00000563130 PRRT3Q5FWE3 981 aa6.14□□□□□ -1.43
CNOT1-204ENST00000563130 PPM1JQ5JR12 505 aa6.14□□□□□ -1.43
CNOT1-204ENST00000563130 PSAPL1Q6NUJ1 521 aa6.14□□□□□ -1.43
CNOT1-204ENST00000563130 ERMP1Q7Z2K6 904 aa6.14□□□□□ -1.43
CNOT1-204ENST00000563130 HID1Q8IV36 788 aa6.14□□□□□ -1.43
CNOT1-204ENST00000563130 SDR16C5Q8N3Y7 309 aa6.14□□□□□ -1.43
CNOT1-204ENST00000563130 FSTL5Q8N475 847 aaPredicted RBP6.14□□□□□ -1.43
CNOT1-204ENST00000563130 TAB3Q8N5C8 712 aaPredicted RBP6.14□□□□□ -1.43
CNOT1-204ENST00000563130 EID2Q8N6I1 236 aa6.14□□□□□ -1.43
CNOT1-204ENST00000563130 FAM181AQ8N9Y4 354 aa6.14□□□□□ -1.43
CNOT1-204ENST00000563130 KDF1Q8NAX2 398 aaPredicted RBP6.14□□□□□ -1.43
CNOT1-204ENST00000563130 LRRC45Q96CN5 670 aa6.14□□□□□ -1.43
CNOT1-204ENST00000563130 VPS35Q96QK1 796 aa6.14□□□□□ -1.43
CNOT1-204ENST00000563130 CDC6Q99741 560 aa6.14□□□□□ -1.43
CNOT1-204ENST00000563130 SLC13A1Q9BZW2 595 aa6.14□□□□□ -1.43
CNOT1-204ENST00000563130 BPIFA1Q9NP55 256 aa6.14□□□□□ -1.43
CNOT1-204ENST00000563130 CASS4Q9NQ75 786 aa6.14□□□□□ -1.43
CNOT1-204ENST00000563130 TRNAU1APQ9NX07 287 aaKnown RBP6.14□□□□□ -1.43
CNOT1-204ENST00000563130 NLGN3Q9NZ94 848 aa6.14□□□□□ -1.43
CNOT1-204ENST00000563130 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.14□□□□□ -1.432e-7■■□□□ 13.3
CNOT1-204ENST00000563130 VPS18Q9P253 973 aa6.14□□□□□ -1.43
CNOT1-204ENST00000563130 KCTD3Q9Y597 815 aa6.14□□□□□ -1.43
CNOT1-204ENST00000563130 ST14Q9Y5Y6 855 aa6.14□□□□□ -1.43
CNOT1-204ENST00000563130 OAS3Q9Y6K5 1087 aaKnown RBP6.14□□□□□ -1.43
CNOT1-204ENST00000563130 LY6G6EA0A0G2JKS1 128 aa6.13□□□□□ -1.43
CNOT1-204ENST00000563130 MROH6A6NGR9 719 aa6.13□□□□□ -1.43
CNOT1-204ENST00000563130 C2orf81A6NN90 581 aa6.13□□□□□ -1.43
CNOT1-204ENST00000563130 H7C0S8 307 aa6.13□□□□□ -1.43
CNOT1-204ENST00000563130 INPP4BO15327 924 aa6.13□□□□□ -1.43
CNOT1-204ENST00000563130 TNFSF14O43557 240 aa6.13□□□□□ -1.43
CNOT1-204ENST00000563130 SIGLEC6O43699 453 aa6.13□□□□□ -1.43
CNOT1-204ENST00000563130 BUD23O43709 281 aaKnown RBP6.13□□□□□ -1.43
CNOT1-204ENST00000563130 DNAJC6O75061 913 aa6.13□□□□□ -1.43
CNOT1-204ENST00000563130 CRTAMO95727 393 aa6.13□□□□□ -1.43
CNOT1-204ENST00000563130 TNFP01375 233 aa6.13□□□□□ -1.43
CNOT1-204ENST00000563130 SLC4A1P02730 911 aa6.13□□□□□ -1.43
CNOT1-204ENST00000563130 APRTP07741 180 aa6.13□□□□□ -1.43
CNOT1-204ENST00000563130 CELA2BP08218 269 aaPredicted RBP6.13□□□□□ -1.43
CNOT1-204ENST00000563130 SPAM1P38567 509 aa6.13□□□□□ -1.43
CNOT1-204ENST00000563130 POLD2P49005 469 aa6.13□□□□□ -1.43
CNOT1-204ENST00000563130 XIAPP98170 497 aa6.13□□□□□ -1.43
CNOT1-204ENST00000563130 PDE1BQ01064 536 aa6.13□□□□□ -1.43
CNOT1-204ENST00000563130 KCTD19Q17RG1 926 aaPredicted RBP6.13□□□□□ -1.43
CNOT1-204ENST00000563130 ATP13A5Q4VNC0 1218 aa6.13□□□□□ -1.43
CNOT1-204ENST00000563130 ALS2CLQ60I27 953 aa6.13□□□□□ -1.43
CNOT1-204ENST00000563130 LVRNQ6Q4G3 990 aa6.13□□□□□ -1.43
CNOT1-204ENST00000563130 ZNF534Q76KX8 674 aa6.13□□□□□ -1.43
CNOT1-204ENST00000563130 GSTA5Q7RTV2 222 aa6.13□□□□□ -1.43
CNOT1-204ENST00000563130 TRIM74Q86UV6 250 aa6.13□□□□□ -1.43
CNOT1-204ENST00000563130 OR4K2Q8NGD2 314 aa6.13□□□□□ -1.43
CNOT1-204ENST00000563130 OR52K1Q8NGK4 314 aa6.13□□□□□ -1.43
CNOT1-204ENST00000563130 UBXN4Q92575 508 aa6.13□□□□□ -1.43
CNOT1-204ENST00000563130 GLYATL1Q969I3 302 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms