RNA–Protein interactions for RNA: ENST00000563112.1

CLK3-210, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-210ENST00000563112 SLC2A4P14672 509 aa16.68■□□□□ 0.26
CLK3-210ENST00000563112 CD68P34810 354 aaPredicted RBP16.68■□□□□ 0.26
CLK3-210ENST00000563112 CTNNA1P35221 906 aaKnown RBP16.68■□□□□ 0.26
CLK3-210ENST00000563112 ATP5OP48047 213 aa16.68■□□□□ 0.26
CLK3-210ENST00000563112 PPM1FP49593 454 aaPredicted RBP16.68■□□□□ 0.26
CLK3-210ENST00000563112 WNT3AP56704 352 aa16.68■□□□□ 0.26
CLK3-210ENST00000563112 TMPRSS3P57727 454 aa16.68■□□□□ 0.26
CLK3-210ENST00000563112 CXADRP78310 365 aa16.68■□□□□ 0.26
CLK3-210ENST00000563112 KIAA1328Q86T90 577 aa16.68■□□□□ 0.26
CLK3-210ENST00000563112 SLITRK4Q8IW52 837 aa16.68■□□□□ 0.26
CLK3-210ENST00000563112 ZNF567Q8N184 647 aa16.68■□□□□ 0.26
CLK3-210ENST00000563112 TXLNBQ8N3L3 684 aa16.68■□□□□ 0.26
CLK3-210ENST00000563112 EID2BQ96D98 161 aa16.68■□□□□ 0.26
CLK3-210ENST00000563112 FCRL5Q96RD9 977 aa16.68■□□□□ 0.26
CLK3-210ENST00000563112 UBL7Q96S82 380 aaPredicted RBP16.68■□□□□ 0.26
CLK3-210ENST00000563112 DPYSL5Q9BPU6 564 aa16.68■□□□□ 0.26
CLK3-210ENST00000563112 OR2AG1Q9H205 316 aa16.68■□□□□ 0.26
CLK3-210ENST00000563112 TRABDQ9H4I3 376 aa16.68■□□□□ 0.26
CLK3-210ENST00000563112 RDH14Q9HBH5 336 aa16.68■□□□□ 0.26
CLK3-210ENST00000563112 TRIM39Q9HCM9 518 aa16.68■□□□□ 0.26
CLK3-210ENST00000563112 KCNK4Q9NYG8 393 aa16.68■□□□□ 0.26
CLK3-210ENST00000563112 PISDQ9UG56 409 aa16.68■□□□□ 0.26
CLK3-210ENST00000563112 TRBV23OR9-2A0A075B6M9 112 aa16.67■□□□□ 0.26
CLK3-210ENST00000563112 LOC285095A0A1B0GVY8 99 aa16.67■□□□□ 0.26
CLK3-210ENST00000563112 RCCD1A6NED2 376 aa16.67■□□□□ 0.26
CLK3-210ENST00000563112 GPR89AB7ZAQ6 455 aa16.67■□□□□ 0.26
CLK3-210ENST00000563112 PPM1DO15297 605 aa16.67■□□□□ 0.26
CLK3-210ENST00000563112 GPR89BP0CG08 455 aa16.67■□□□□ 0.26
CLK3-210ENST00000563112 ACP5P13686 325 aa16.67■□□□□ 0.26
CLK3-210ENST00000563112 CTNNA2P26232 953 aa16.67■□□□□ 0.26
CLK3-210ENST00000563112 SLC5A2P31639 672 aa16.67■□□□□ 0.26
CLK3-210ENST00000563112 VAV2P52735 878 aa16.67■□□□□ 0.26
CLK3-210ENST00000563112 RWDD2BP57060 319 aa16.67■□□□□ 0.26
CLK3-210ENST00000563112 MPP3Q13368 585 aa16.67■□□□□ 0.26
CLK3-210ENST00000563112 SOWAHCQ53LP3 525 aaPredicted RBP16.67■□□□□ 0.26
CLK3-210ENST00000563112 KDELC1Q6UW63 502 aa16.67■□□□□ 0.26
CLK3-210ENST00000563112 PHYKPLQ8IUZ5 450 aa16.67■□□□□ 0.26
CLK3-210ENST00000563112 GLYATL1Q969I3 302 aa16.67■□□□□ 0.26
CLK3-210ENST00000563112 SH3KBP1Q96B97 665 aa16.67■□□□□ 0.26
CLK3-210ENST00000563112 SLC38A3Q99624 504 aa16.67■□□□□ 0.26
CLK3-210ENST00000563112 BAG1Q99933 345 aaPredicted RBP16.67■□□□□ 0.26
CLK3-210ENST00000563112 OSBPL8Q9BZF1 889 aa16.67■□□□□ 0.26
CLK3-210ENST00000563112 ZMYND15Q9H091 742 aa16.67■□□□□ 0.26
CLK3-210ENST00000563112 SEMA6CQ9H3T2 930 aa16.67■□□□□ 0.26
CLK3-210ENST00000563112 HACD3Q9P035 362 aa16.67■□□□□ 0.26
CLK3-210ENST00000563112 ATXN10Q9UBB4 475 aa16.67■□□□□ 0.26
CLK3-210ENST00000563112 RSPH14Q9UHP6 348 aa16.67■□□□□ 0.26
CLK3-210ENST00000563112 KCNK6Q9Y257 313 aa16.67■□□□□ 0.26
CLK3-210ENST00000563112 EFR3BQ9Y2G0 817 aa16.67■□□□□ 0.26
CLK3-210ENST00000563112 SPO11Q9Y5K1 396 aa16.67■□□□□ 0.26
CLK3-210ENST00000563112 BPTFQ12830 3046 aa16.66■□□□□ 0.26
CLK3-210ENST00000563112 TEX51A0A1B0GUA7 166 aa16.66■□□□□ 0.26
CLK3-210ENST00000563112 MACROD2A1Z1Q3 448 aa16.66■□□□□ 0.26
CLK3-210ENST00000563112 AGRPO00253 132 aa16.66■□□□□ 0.26
CLK3-210ENST00000563112 SNX2O60749 519 aa16.66■□□□□ 0.26
CLK3-210ENST00000563112 STK10O94804 968 aaKnown RBP16.66■□□□□ 0.26
CLK3-210ENST00000563112 HGFP14210 728 aa16.66■□□□□ 0.26
CLK3-210ENST00000563112 ZNF8P17098 575 aaPredicted RBP16.66■□□□□ 0.26
CLK3-210ENST00000563112 BPIP17213 487 aa16.66■□□□□ 0.26
CLK3-210ENST00000563112 CD1CP29017 333 aa16.66■□□□□ 0.26
CLK3-210ENST00000563112 HMGCLP35914 325 aa16.66■□□□□ 0.26
CLK3-210ENST00000563112 FASLGP48023 281 aa16.66■□□□□ 0.26
CLK3-210ENST00000563112 GPLD1P80108 840 aa16.66■□□□□ 0.26
CLK3-210ENST00000563112 NOMO1Q15155 1222 aa16.66■□□□□ 0.26
CLK3-210ENST00000563112 ZDHHC20Q5W0Z9 365 aa16.66■□□□□ 0.26
CLK3-210ENST00000563112 ITPRIPL1Q6GPH6 555 aa16.66■□□□□ 0.26
CLK3-210ENST00000563112 RAD9BQ6WBX8 426 aa16.66■□□□□ 0.26
CLK3-210ENST00000563112 TMPRSS9Q7Z410 1059 aa16.66■□□□□ 0.26
CLK3-210ENST00000563112 SLC9B2Q86UD5 537 aa16.66■□□□□ 0.26
CLK3-210ENST00000563112 CDKL3Q8IVW4 592 aaPredicted RBP16.66■□□□□ 0.26
CLK3-210ENST00000563112 SFRP1Q8N474 314 aa16.66■□□□□ 0.26
CLK3-210ENST00000563112 SLC25A41Q8N5S1 370 aa16.66■□□□□ 0.26
CLK3-210ENST00000563112 IPMKQ8NFU5 416 aa16.66■□□□□ 0.26
CLK3-210ENST00000563112 SLC37A2Q8TED4 501 aa16.66■□□□□ 0.26
CLK3-210ENST00000563112 AHCYL2Q96HN2 611 aaKnown RBP16.66■□□□□ 0.26
CLK3-210ENST00000563112 PLEKHG4BQ96PX9 1271 aa16.66■□□□□ 0.26
CLK3-210ENST00000563112 HERPUD2Q9BSE4 406 aa16.66■□□□□ 0.26
CLK3-210ENST00000563112 FSD1LQ9BXM9 530 aa16.66■□□□□ 0.26
CLK3-210ENST00000563112 BPIFA1Q9NP55 256 aa16.66■□□□□ 0.26
CLK3-210ENST00000563112 ARFGAP3Q9NP61 516 aa16.66■□□□□ 0.26
CLK3-210ENST00000563112 WDR70Q9NW82 654 aa16.66■□□□□ 0.26
CLK3-210ENST00000563112 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.66■□□□□ 0.26
CLK3-210ENST00000563112 DUSP10Q9Y6W6 482 aa16.66■□□□□ 0.26
CLK3-210ENST00000563112 IGHV1OR21-1A0A087WYE8 117 aa16.65■□□□□ 0.26
CLK3-210ENST00000563112 OR5K4A6NMS3 321 aa16.65■□□□□ 0.26
CLK3-210ENST00000563112 F5H423 210 aaPredicted RBP16.65■□□□□ 0.26
CLK3-210ENST00000563112 HGSO14964 777 aaPredicted RBP16.65■□□□□ 0.26
CLK3-210ENST00000563112 AURKAO14965 403 aa16.65■□□□□ 0.26
CLK3-210ENST00000563112 NVLO15381 856 aaKnown RBP16.65■□□□□ 0.26
CLK3-210ENST00000563112 PJA2O43164 708 aa16.65■□□□□ 0.26
CLK3-210ENST00000563112 VEGFDO43915 354 aa16.65■□□□□ 0.26
CLK3-210ENST00000563112 ANXA9O76027 345 aa16.65■□□□□ 0.26
CLK3-210ENST00000563112 PTMAP06454 111 aaKnown RBP16.65■□□□□ 0.26
CLK3-210ENST00000563112 HOXB3P14651 431 aaPredicted RBP16.65■□□□□ 0.26
CLK3-210ENST00000563112 HLA-DPA1P20036 260 aa16.65■□□□□ 0.26
CLK3-210ENST00000563112 RBL1P28749 1068 aa16.65■□□□□ 0.26
CLK3-210ENST00000563112 PTPN7P35236 360 aa16.65■□□□□ 0.26
CLK3-210ENST00000563112 MAPK10P53779 464 aa16.65■□□□□ 0.26
CLK3-210ENST00000563112 GEMP55040 296 aa16.65■□□□□ 0.26
CLK3-210ENST00000563112 SQSTM1Q13501 440 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms