RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 CPXM2Q8N436 756 aa7.51□□□□□ -1.21
TCF4-216ENST00000562680 ZBTB2Q8N680 514 aa7.51□□□□□ -1.21
TCF4-216ENST00000562680 SMARCD2Q92925 531 aa7.51□□□□□ -1.21
TCF4-216ENST00000562680 KLHL32Q96NJ5 620 aa7.51□□□□□ -1.21
TCF4-216ENST00000562680 SLC27A6Q9Y2P4 619 aa7.51□□□□□ -1.21
TCF4-216ENST00000562680 WDR90Q96KV7 1748 aa7.51□□□□□ -1.21
TCF4-216ENST00000562680 SLC28A1O00337 649 aa7.51□□□□□ -1.21
TCF4-216ENST00000562680 CCNDBP1O95273 360 aa7.51□□□□□ -1.21
TCF4-216ENST00000562680 GUCA1CO95843 209 aa7.51□□□□□ -1.21
TCF4-216ENST00000562680 CTSEP14091 401 aa7.51□□□□□ -1.21
TCF4-216ENST00000562680 TYRP14679 529 aa7.51□□□□□ -1.21
TCF4-216ENST00000562680 NMBRP28336 390 aa7.51□□□□□ -1.21
TCF4-216ENST00000562680 ACVRL1P37023 503 aa7.51□□□□□ -1.21
TCF4-216ENST00000562680 NUDT2P50583 147 aa7.51□□□□□ -1.21
TCF4-216ENST00000562680 NEK3P51956 506 aa7.51□□□□□ -1.21
TCF4-216ENST00000562680 MYLK3Q32MK0 819 aa7.51□□□□□ -1.21
TCF4-216ENST00000562680 DPY19L2P1Q6NXN4 242 aa7.51□□□□□ -1.21
TCF4-216ENST00000562680 ZNF655Q8N720 491 aaPredicted RBP7.51□□□□□ -1.21
TCF4-216ENST00000562680 KYQ8NBH2 561 aa7.51□□□□□ -1.21
TCF4-216ENST00000562680 OR6K2Q8NGY2 324 aa7.51□□□□□ -1.21
TCF4-216ENST00000562680 IMP4Q96G21 291 aaKnown RBP7.51□□□□□ -1.21
TCF4-216ENST00000562680 SHDQ96IW2 340 aa7.51□□□□□ -1.21
TCF4-216ENST00000562680 RANBP9Q96S59 729 aa7.51□□□□□ -1.21
TCF4-216ENST00000562680 RAD21L1Q9H4I0 556 aa7.51□□□□□ -1.21
TCF4-216ENST00000562680 NSUN3Q9H649 340 aaKnown RBP7.51□□□□□ -1.21
TCF4-216ENST00000562680 SPHK2Q9NRA0 654 aa7.51□□□□□ -1.21
TCF4-216ENST00000562680 CLCA2Q9UQC9 943 aa7.51□□□□□ -1.21
TCF4-216ENST00000562680 POLR2AP24928 1970 aaKnown RBP7.51□□□□□ -1.21
TCF4-216ENST00000562680 PLIN3O60664 434 aa7.51□□□□□ -1.21
TCF4-216ENST00000562680 CDK14O94921 469 aa7.51□□□□□ -1.21
TCF4-216ENST00000562680 GOT2P00505 430 aaKnown RBP7.51□□□□□ -1.21
TCF4-216ENST00000562680 ACSM2AQ08AH3 577 aa7.51□□□□□ -1.21
TCF4-216ENST00000562680 TRMT5Q32P41 509 aaKnown RBP7.51□□□□□ -1.21
TCF4-216ENST00000562680 PIK3R6Q5UE93 754 aa7.51□□□□□ -1.21
TCF4-216ENST00000562680 METTL21CQ5VZV1 264 aa7.51□□□□□ -1.21
TCF4-216ENST00000562680 ACSM2BQ68CK6 577 aa7.51□□□□□ -1.21
TCF4-216ENST00000562680 RGS9BPQ6ZS82 235 aa7.51□□□□□ -1.21
TCF4-216ENST00000562680 TRIML2Q8N7C3 387 aa7.51□□□□□ -1.21
TCF4-216ENST00000562680 ECSITQ9BQ95 431 aa7.51□□□□□ -1.21
TCF4-216ENST00000562680 TNKS2Q9H2K2 1166 aa7.51□□□□□ -1.21
TCF4-216ENST00000562680 FBRSQ9HAH7 460 aa7.51□□□□□ -1.21
TCF4-216ENST00000562680 ATAD3AQ9NVI7 634 aa7.51□□□□□ -1.21
TCF4-216ENST00000562680 COPG2Q9UBF2 871 aa7.51□□□□□ -1.21
TCF4-216ENST00000562680 RIMKLBQ9ULI2 386 aa7.51□□□□□ -1.21
TCF4-216ENST00000562680 TMEM98Q9Y2Y6 226 aa7.51□□□□□ -1.21
TCF4-216ENST00000562680 ATAD5Q96QE3 1844 aa7.51□□□□□ -1.21
TCF4-216ENST00000562680 LOC100653049A0A140TA62 436 aa7.51□□□□□ -1.21
TCF4-216ENST00000562680 MATN2O00339 956 aa7.51□□□□□ -1.21
TCF4-216ENST00000562680 SGTAO43765 313 aa7.51□□□□□ -1.21
TCF4-216ENST00000562680 KRT34O76011 436 aa7.51□□□□□ -1.21
TCF4-216ENST00000562680 C8GP07360 202 aa7.51□□□□□ -1.21
TCF4-216ENST00000562680 PSMD8P48556 350 aa7.51□□□□□ -1.21
TCF4-216ENST00000562680 TRPC1P48995 793 aa7.51□□□□□ -1.21
TCF4-216ENST00000562680 DEFB103AP81534 67 aa7.51□□□□□ -1.21
TCF4-216ENST00000562680 RALGDSQ12967 914 aa7.51□□□□□ -1.21
TCF4-216ENST00000562680 C1orf53Q5VUE5 145 aa7.51□□□□□ -1.21
TCF4-216ENST00000562680 ZYG11AQ6WRX3 759 aa7.51□□□□□ -1.21
TCF4-216ENST00000562680 TIFABQ6ZNK6 161 aa7.51□□□□□ -1.21
TCF4-216ENST00000562680 C14orf80Q86SX3 495 aa7.51□□□□□ -1.21
TCF4-216ENST00000562680 ZNF276Q8N554 614 aa7.51□□□□□ -1.21
TCF4-216ENST00000562680 HIPK4Q8NE63 616 aa7.51□□□□□ -1.21
TCF4-216ENST00000562680 SIGLEC10Q96LC7 697 aa7.51□□□□□ -1.21
TCF4-216ENST00000562680 ZSCAN5AQ9BUG6 496 aa7.51□□□□□ -1.21
TCF4-216ENST00000562680 DIABLOQ9NR28 239 aa7.51□□□□□ -1.21
TCF4-216ENST00000562680 UPK3BL1B0FP48 263 aa7.5□□□□□ -1.21
TCF4-216ENST00000562680 ANKRD66B4E2M5 251 aa7.5□□□□□ -1.21
TCF4-216ENST00000562680 UPK3BL2E5RIL1 263 aa7.5□□□□□ -1.21
TCF4-216ENST00000562680 CNTN5O94779 1100 aa7.5□□□□□ -1.21
TCF4-216ENST00000562680 IFNA14P01570 189 aa7.5□□□□□ -1.21
TCF4-216ENST00000562680 SRPRAP08240 638 aaKnown RBP7.5□□□□□ -1.21
TCF4-216ENST00000562680 VAV1P15498 845 aa7.5□□□□□ -1.21
TCF4-216ENST00000562680 ADSLP30566 484 aaPredicted RBP7.5□□□□□ -1.21
TCF4-216ENST00000562680 GDI1P31150 447 aa7.5□□□□□ -1.21
TCF4-216ENST00000562680 VIPR1P32241 457 aa7.5□□□□□ -1.21
TCF4-216ENST00000562680 ABCG1P45844 678 aa7.5□□□□□ -1.21
TCF4-216ENST00000562680 PKNOX1P55347 436 aa7.5□□□□□ -1.21
TCF4-216ENST00000562680 SQLEQ14534 574 aa7.5□□□□□ -1.21
TCF4-216ENST00000562680 LY6G5CQ5SRR4 150 aa7.5□□□□□ -1.21
TCF4-216ENST00000562680 KLHL35Q6PF15 583 aa7.5□□□□□ -1.21
TCF4-216ENST00000562680 DOK6Q6PKX4 331 aa7.5□□□□□ -1.21
TCF4-216ENST00000562680 CMC1Q7Z7K0 106 aa7.5□□□□□ -1.21
TCF4-216ENST00000562680 MRPL43Q8N983 215 aaKnown RBP7.5□□□□□ -1.21
TCF4-216ENST00000562680 ST13P5Q8NFI4 369 aaPredicted RBP7.5□□□□□ -1.21
TCF4-216ENST00000562680 RAB7BQ96AH8 199 aa7.5□□□□□ -1.21
TCF4-216ENST00000562680 CDKN2AIPNLQ96HQ2 116 aa7.5□□□□□ -1.21
TCF4-216ENST00000562680 KLHL25Q9H0H3 589 aa7.5□□□□□ -1.21
TCF4-216ENST00000562680 GDE1Q9NZC3 331 aa7.5□□□□□ -1.21
TCF4-216ENST00000562680 FBXO10Q9UK96 956 aa7.5□□□□□ -1.21
TCF4-216ENST00000562680 RNF103-CHMP3A0A140T963 221 aa7.5□□□□□ -1.21
TCF4-216ENST00000562680 A0A1W2PPM1 405 aa7.5□□□□□ -1.21
TCF4-216ENST00000562680 A8MX80 341 aa7.5□□□□□ -1.21
TCF4-216ENST00000562680 E9PBE3 544 aa7.5□□□□□ -1.21
TCF4-216ENST00000562680 J3KR12 359 aa7.5□□□□□ -1.21
TCF4-216ENST00000562680 AZIN1O14977 448 aa7.5□□□□□ -1.21
TCF4-216ENST00000562680 AXIN1O15169 862 aa7.5□□□□□ -1.21
TCF4-216ENST00000562680 KLHL41O60662 606 aa7.5□□□□□ -1.21
TCF4-216ENST00000562680 DRD4P21917 467 aa7.5□□□□□ -1.21
TCF4-216ENST00000562680 MCCD1P59942 119 aaPredicted RBP7.5□□□□□ -1.21
TCF4-216ENST00000562680 PITX1P78337 314 aaPredicted RBP7.5□□□□□ -1.21
TCF4-216ENST00000562680 SLC7A9P82251 487 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms