RNA–Protein interactions for RNA: ENST00000562542.1

KATNB1-202, Transcript of katanin regulatory subunit B1, humanhuman

TSL 2

Gene KATNB1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNB1-202ENST00000562542 TRAF2Q12933 501 aa18.18■□□□□ 0.5
KATNB1-202ENST00000562542 PTP4A2Q12974 167 aa18.18■□□□□ 0.5
KATNB1-202ENST00000562542 ELOAQ14241 798 aaKnown RBP18.18■□□□□ 0.5
KATNB1-202ENST00000562542 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.18■□□□□ 0.5
KATNB1-202ENST00000562542 ARMC12Q5T9G4 340 aa18.18■□□□□ 0.5
KATNB1-202ENST00000562542 PAPD7Q5XG87 772 aaKnown RBP18.18■□□□□ 0.5
KATNB1-202ENST00000562542 SLC6A19Q695T7 634 aa18.18■□□□□ 0.5
KATNB1-202ENST00000562542 SYVN1Q86TM6 617 aa18.18■□□□□ 0.5
KATNB1-202ENST00000562542 TRIM48Q8IWZ4 208 aa18.18■□□□□ 0.5
KATNB1-202ENST00000562542 NDUFAF2Q8N183 169 aa18.18■□□□□ 0.5
KATNB1-202ENST00000562542 NPWQ8N729 165 aa18.18■□□□□ 0.5
KATNB1-202ENST00000562542 C19orf60Q96EN9 201 aa18.18■□□□□ 0.5
KATNB1-202ENST00000562542 COX14Q96I36 57 aa18.18■□□□□ 0.5
KATNB1-202ENST00000562542 NUDCD1Q96RS6 583 aa18.18■□□□□ 0.5
KATNB1-202ENST00000562542 CNPY3Q9BT09 278 aa18.18■□□□□ 0.5
KATNB1-202ENST00000562542 RIOK2Q9BVS4 552 aaKnown RBP18.18■□□□□ 0.5
KATNB1-202ENST00000562542 VPS16Q9H269 839 aa18.18■□□□□ 0.5
KATNB1-202ENST00000562542 PDE7BQ9NP56 450 aa18.18■□□□□ 0.5
KATNB1-202ENST00000562542 OGFRQ9NZT2 677 aa18.18■□□□□ 0.5
KATNB1-202ENST00000562542 VPS18Q9P253 973 aa18.18■□□□□ 0.5
KATNB1-202ENST00000562542 PCDHGB7Q9Y5F8 929 aa18.18■□□□□ 0.5
KATNB1-202ENST00000562542 OTOGQ6ZRI0 2925 aa18.18■□□□□ 0.5
KATNB1-202ENST00000562542 PGLSO95336 258 aa18.17■□□□□ 0.5
KATNB1-202ENST00000562542 HSPA9P38646 679 aaKnown RBP18.17■□□□□ 0.5
KATNB1-202ENST00000562542 GSCP56915 257 aaPredicted RBP18.17■□□□□ 0.5
KATNB1-202ENST00000562542 IL10RAQ13651 578 aa18.17■□□□□ 0.5
KATNB1-202ENST00000562542 ZRANB3Q5FWF4 1079 aa18.17■□□□□ 0.5
KATNB1-202ENST00000562542 CACHD1Q5VU97 1274 aa18.17■□□□□ 0.5
KATNB1-202ENST00000562542 FAM199XQ6PEV8 388 aaPredicted RBP18.17■□□□□ 0.5
KATNB1-202ENST00000562542 RFX8Q6ZV50 586 aa18.17■□□□□ 0.5
KATNB1-202ENST00000562542 ZNF765Q7L2R6 523 aa18.17■□□□□ 0.5
KATNB1-202ENST00000562542 RHOT1Q8IXI2 618 aa18.17■□□□□ 0.5
KATNB1-202ENST00000562542 SLC34A3Q8N130 599 aa18.17■□□□□ 0.5
KATNB1-202ENST00000562542 MARVELD3Q96A59 401 aa18.17■□□□□ 0.5
KATNB1-202ENST00000562542 PNPLA2Q96AD5 504 aa18.17■□□□□ 0.5
KATNB1-202ENST00000562542 ZNF599Q96NL3 588 aa18.17■□□□□ 0.5
KATNB1-202ENST00000562542 MCCC1Q96RQ3 725 aaPredicted RBP18.17■□□□□ 0.5
KATNB1-202ENST00000562542 TUBGCP2Q9BSJ2 902 aa18.17■□□□□ 0.5
KATNB1-202ENST00000562542 OSGEPL1Q9H4B0 414 aa18.17■□□□□ 0.5
KATNB1-202ENST00000562542 ARHGAP10A1A4S6 786 aa18.16■□□□□ 0.5
KATNB1-202ENST00000562542 KIF1CO43896 1103 aaKnown RBP18.16■□□□□ 0.5
KATNB1-202ENST00000562542 TIAF1O95411 115 aa18.16■□□□□ 0.5
KATNB1-202ENST00000562542 VIPP01282 170 aa18.16■□□□□ 0.5
KATNB1-202ENST00000562542 UNGP13051 313 aaPredicted RBP18.16■□□□□ 0.5
KATNB1-202ENST00000562542 ERCC2P18074 760 aa18.16■□□□□ 0.5
KATNB1-202ENST00000562542 PTGIRP43119 386 aa18.16■□□□□ 0.5
KATNB1-202ENST00000562542 MAXP61244 160 aa18.16■□□□□ 0.5
KATNB1-202ENST00000562542 RPL7AP62424 266 aaKnown RBP18.16■□□□□ 0.5
KATNB1-202ENST00000562542 PDE1BQ01064 536 aa18.16■□□□□ 0.5
KATNB1-202ENST00000562542 TUBB3Q13509 450 aa18.16■□□□□ 0.5
KATNB1-202ENST00000562542 HSP90AA4PQ58FG1 418 aa18.16■□□□□ 0.5
KATNB1-202ENST00000562542 MIIPQ5JXC2 388 aa18.16■□□□□ 0.5
KATNB1-202ENST00000562542 DCUN1D2Q6PH85 259 aa18.16■□□□□ 0.5
KATNB1-202ENST00000562542 FAM92BQ6ZTR7 304 aa18.16■□□□□ 0.5
KATNB1-202ENST00000562542 TMEM26Q6ZUK4 368 aa18.16■□□□□ 0.5
KATNB1-202ENST00000562542 BBS5Q8N3I7 341 aa18.16■□□□□ 0.5
KATNB1-202ENST00000562542 PLEKHG4BQ96PX9 1271 aa18.16■□□□□ 0.5
KATNB1-202ENST00000562542 SEPT11Q9NVA2 429 aaKnown RBP18.16■□□□□ 0.5
KATNB1-202ENST00000562542 RARRES3Q9UL19 164 aa18.16■□□□□ 0.5
KATNB1-202ENST00000562542 SLC30A1Q9Y6M5 507 aa18.16■□□□□ 0.5
KATNB1-202ENST00000562542 POLQO75417 2590 aa18.15■□□□□ 0.5
KATNB1-202ENST00000562542 ANKUB1A6NFN9 424 aa18.15■□□□□ 0.5
KATNB1-202ENST00000562542 A6NL46 340 aa18.15■□□□□ 0.5
KATNB1-202ENST00000562542 HNRNPRO43390 633 aaKnown RBP18.15■□□□□ 0.5
KATNB1-202ENST00000562542 UBE2IP63279 158 aaKnown RBP18.15■□□□□ 0.5
KATNB1-202ENST00000562542 CA9Q16790 459 aa18.15■□□□□ 0.5
KATNB1-202ENST00000562542 PPP6R3Q5H9R7 873 aaPredicted RBP18.15■□□□□ 0.5
KATNB1-202ENST00000562542 PWWP2BQ6NUJ5 590 aa18.15■□□□□ 0.5
KATNB1-202ENST00000562542 IRGCQ6NXR0 463 aa18.15■□□□□ 0.5
KATNB1-202ENST00000562542 PRSS42Q7Z5A4 293 aa18.15■□□□□ 0.5
KATNB1-202ENST00000562542 HPS6Q86YV9 775 aa18.15■□□□□ 0.5
KATNB1-202ENST00000562542 PGBD5Q8N414 524 aa18.15■□□□□ 0.5
KATNB1-202ENST00000562542 FDCSPQ8NFU4 85 aa18.15■□□□□ 0.5
KATNB1-202ENST00000562542 SNRNP40Q96DI7 357 aaKnown RBP18.15■□□□□ 0.5
KATNB1-202ENST00000562542 ZDHHC12Q96GR4 267 aa18.15■□□□□ 0.5
KATNB1-202ENST00000562542 PCDHB18PQ96TA0 734 aa18.15■□□□□ 0.5
KATNB1-202ENST00000562542 RMI1Q9H9A7 625 aa18.15■□□□□ 0.5
KATNB1-202ENST00000562542 AKIRIN1Q9H9L7 192 aaPredicted RBP18.15■□□□□ 0.5
KATNB1-202ENST00000562542 UCK1Q9HA47 277 aa18.15■□□□□ 0.5
KATNB1-202ENST00000562542 EIF3CLB5ME19 914 aaKnown RBP18.14■□□□□ 0.49
KATNB1-202ENST00000562542 ZNF185O15231 689 aa18.14■□□□□ 0.49
KATNB1-202ENST00000562542 GRID2O43424 1007 aa18.14■□□□□ 0.49
KATNB1-202ENST00000562542 CBX6O95503 412 aa18.14■□□□□ 0.49
KATNB1-202ENST00000562542 ZNF30P17039 623 aa18.14■□□□□ 0.49
KATNB1-202ENST00000562542 EPHB1P54762 984 aa18.14■□□□□ 0.49
KATNB1-202ENST00000562542 PTSQ03393 145 aa18.14■□□□□ 0.49
KATNB1-202ENST00000562542 SYCP1Q15431 976 aa18.14■□□□□ 0.49
KATNB1-202ENST00000562542 CLEC16AQ2KHT3 1053 aa18.14■□□□□ 0.49
KATNB1-202ENST00000562542 NLRP8Q86W28 1048 aa18.14■□□□□ 0.49
KATNB1-202ENST00000562542 PHF13Q86YI8 300 aaPredicted RBP18.14■□□□□ 0.49
KATNB1-202ENST00000562542 IQCKQ8N0W5 287 aa18.14■□□□□ 0.49
KATNB1-202ENST00000562542 RBMXL3Q8N7X1 1067 aaKnown RBP18.14■□□□□ 0.49
KATNB1-202ENST00000562542 SMIM14Q96QK8 99 aa18.14■□□□□ 0.49
KATNB1-202ENST00000562542 KCTD15Q96SI1 283 aaPredicted RBP18.14■□□□□ 0.49
KATNB1-202ENST00000562542 EIF3CQ99613 913 aaKnown RBP18.14■□□□□ 0.49
KATNB1-202ENST00000562542 MGME1Q9BQP7 344 aa18.14■□□□□ 0.49
KATNB1-202ENST00000562542 NUDT9Q9BW91 350 aa18.14■□□□□ 0.49
KATNB1-202ENST00000562542 ASF1BQ9NVP2 202 aa18.14■□□□□ 0.49
KATNB1-202ENST00000562542 FARSAQ9Y285 508 aaKnown RBP18.14■□□□□ 0.49
KATNB1-202ENST00000562542 NELFEP18615 380 aaKnown RBP18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms