RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 MAP7D3Q8IWC1 876 aa16.52■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 CCDC13Q8IYE1 715 aa16.52■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 CCNYQ8ND76 341 aa16.52■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 NCSTNQ92542 709 aa16.52■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 MLPHQ9BV36 600 aaPredicted RBP16.52■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 PACSIN1Q9BY11 444 aa16.52■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 RMI1Q9H9A7 625 aa16.52■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 PKD2L2Q9NZM6 624 aa16.52■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 CTTNBP2NLQ9P2B4 639 aa16.52■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 ATXN10Q9UBB4 475 aa16.52■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 LUC7L2Q9Y383 392 aaKnown RBP16.52■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 ADGRG1Q9Y653 693 aa16.52■□□□□ 0.24
VPS9D1-AS1-201ENST00000562298 TLN1Q9Y490 2541 aaKnown RBP16.52■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 RGSL1A5PLK6 1076 aa16.51■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 NUAK1O60285 661 aa16.51■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 SNX2O60749 519 aa16.51■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 KRT7P08729 469 aa16.51■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 MAPK9P45984 424 aa16.51■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 EPHA4P54764 986 aa16.51■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 PPIDQ08752 370 aaKnown RBP16.51■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 ZNF648Q5T619 568 aaPredicted RBP16.51■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 TIPARPQ7Z3E1 657 aaKnown RBP16.51■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 SLC9B2Q86UD5 537 aa16.51■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 PLD5Q8N7P1 536 aa16.51■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 RAPGEF5Q92565 580 aa16.51■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 TEFMQ96QE5 360 aaKnown RBP16.51■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 HERPUD2Q9BSE4 406 aa16.51■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 TBC1D10AQ9BXI6 508 aa16.51■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 CARD9Q9H257 536 aa16.51■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 STN1Q9H668 368 aaKnown RBP16.51■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 APMAPQ9HDC9 416 aa16.51■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 ARFGAP3Q9NP61 516 aa16.51■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 UVRAGQ9P2Y5 699 aa16.51■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 SYCE3A1L190 88 aa16.5■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 GRID2O43424 1007 aa16.5■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 ZNF8P17098 575 aaPredicted RBP16.5■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 CASP14P31944 242 aa16.5■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 POLE2P56282 527 aa16.5■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 IFI35P80217 286 aaPredicted RBP16.5■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 GPR26Q8NDV2 337 aa16.5■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 CCHCR1Q8TD31 782 aa16.5■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 SH3KBP1Q96B97 665 aa16.5■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 IQCDQ96DY2 449 aa16.5■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 SLC45A3Q96JT2 553 aa16.5■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 RNF157Q96PX1 679 aa16.5■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 TRIB3Q96RU7 358 aa16.5■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 CEP41Q9BYV8 373 aa16.5■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 BRD8Q9H0E9 1235 aa16.5■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 ADNPQ9H2P0 1102 aa16.5■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 PRDM8Q9NQV8 689 aa16.5■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 FBXO8Q9NRD0 319 aa16.5■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 CPNE7Q9UBL6 633 aa16.5■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 KLHL3Q9UH77 587 aa16.5■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 KIR2DS5A0A0G2JLQ3 304 aa16.49■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 A0A0G2JNG1 304 aa16.49■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 LOC101059948A0A1B0GTJ6 334 aa16.49■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 ZNF891A8MT65 544 aaPredicted RBP16.49■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 KIR2DS3K7RE56 304 aa16.49■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 NKX2-8O15522 239 aa16.49■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 ARHGAP6O43182 974 aa16.49■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 PIRTP0C851 137 aa16.49■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 SLC2A4P14672 509 aa16.49■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 KDELR1P24390 212 aa16.49■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 MAN1A1P33908 653 aa16.49■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 UBE2IP63279 158 aaKnown RBP16.49■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 TPM4P67936 248 aa16.49■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 KCNAB2Q13303 367 aa16.49■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 KIR2DS5Q14953 304 aa16.49■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 ALS2CLQ60I27 953 aa16.49■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 CEACAM20Q6UY09 585 aa16.49■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 PHYKPLQ8IUZ5 450 aa16.49■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 UNC5BQ8IZJ1 945 aa16.49■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 NLGN4XQ8N0W4 816 aa16.49■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 NLGN4YQ8NFZ3 816 aaPredicted RBP16.49■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 SPATA16Q9BXB7 569 aa16.49■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 ADGRE3Q9BY15 652 aa16.49■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.49■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 OR2AG1Q9H205 316 aa16.49■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 GPN2Q9H9Y4 310 aaPredicted RBP16.49■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 ZFYVE1Q9HBF4 777 aa16.49■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 SIDT1Q9NXL6 827 aaKnown RBP16.49■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 OGFRQ9NZT2 677 aa16.49■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 SCHIP1Q9P0W5 487 aaPredicted RBP16.49■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 TMEM184BQ9Y519 407 aaPredicted RBP16.49■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 HEY1Q9Y5J3 304 aa16.49■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 HECTD1Q9ULT8 2610 aa16.49■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 MN1Q10571 1320 aaPredicted RBP16.48■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 C3orf70A6NLC5 250 aaPredicted RBP16.48■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 STK17BO94768 372 aa16.48■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 H2AFZP0C0S5 128 aa16.48■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 MAP4P27816 1152 aaKnown RBP16.48■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 HNRNPH3P31942 346 aaKnown RBP16.48■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 CLCNKAP51800 687 aa16.48■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 GFERP55789 205 aa16.48■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 DCDC1P59894 354 aa16.48■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 SLC18A3Q16572 532 aa16.48■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 ZNF569Q5MCW4 686 aa16.48■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 ZFYVE27Q5T4F4 411 aa16.48■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 H2AFVQ71UI9 128 aa16.48■□□□□ 0.23
VPS9D1-AS1-201ENST00000562298 KDELC2Q7Z4H8 507 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms