RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 PRAMEF33A0A0G2JMD5 474 aa10.18□□□□□ -0.78
CLK3-205ENST00000561673 RCCD1A6NED2 376 aa10.18□□□□□ -0.78
CLK3-205ENST00000561673 C9orf172C9J069 976 aa10.18□□□□□ -0.78
CLK3-205ENST00000561673 K7ENP7 123 aa10.18□□□□□ -0.78
CLK3-205ENST00000561673 TK2O00142 265 aa10.18□□□□□ -0.78
CLK3-205ENST00000561673 AURKAO14965 403 aa10.18□□□□□ -0.78
CLK3-205ENST00000561673 EFSO43281 561 aa10.18□□□□□ -0.78
CLK3-205ENST00000561673 GRID2O43424 1007 aa10.18□□□□□ -0.78
CLK3-205ENST00000561673 NUAK1O60285 661 aa10.18□□□□□ -0.78
CLK3-205ENST00000561673 PRAMEF10O60809 474 aa10.18□□□□□ -0.78
CLK3-205ENST00000561673 SLC25A14O95258 325 aaPredicted RBP10.18□□□□□ -0.78
CLK3-205ENST00000561673 NDST3O95803 873 aa10.18□□□□□ -0.78
CLK3-205ENST00000561673 SLC4A1P02730 911 aa10.18□□□□□ -0.78
CLK3-205ENST00000561673 ACP5P13686 325 aa10.18□□□□□ -0.78
CLK3-205ENST00000561673 ZNF8P17098 575 aaPredicted RBP10.18□□□□□ -0.78
CLK3-205ENST00000561673 BPIP17213 487 aa10.18□□□□□ -0.78
CLK3-205ENST00000561673 MPSTP25325 297 aa10.18□□□□□ -0.78
CLK3-205ENST00000561673 FASLGP48023 281 aa10.18□□□□□ -0.78
CLK3-205ENST00000561673 LIMK2P53671 638 aa10.18□□□□□ -0.78
CLK3-205ENST00000561673 MAPK10P53779 464 aa10.18□□□□□ -0.78
CLK3-205ENST00000561673 DCDC1P59894 354 aa10.18□□□□□ -0.78
CLK3-205ENST00000561673 C16orf72Q14CZ0 275 aa10.18□□□□□ -0.78
CLK3-205ENST00000561673 CLPPQ16740 277 aaPredicted RBP10.18□□□□□ -0.78
CLK3-205ENST00000561673 CCDC70Q6NSX1 233 aa10.18□□□□□ -0.78
CLK3-205ENST00000561673 IYDQ6PHW0 289 aa10.18□□□□□ -0.78
CLK3-205ENST00000561673 INO80CQ6PI98 192 aaPredicted RBP10.18□□□□□ -0.78
CLK3-205ENST00000561673 ADGRG6Q86SQ4 1221 aa10.18□□□□□ -0.78
CLK3-205ENST00000561673 ZC3H18Q86VM9 953 aaKnown RBP10.18□□□□□ -0.78
CLK3-205ENST00000561673 ZNF761Q86XN6 746 aaPredicted RBP10.18□□□□□ -0.78
CLK3-205ENST00000561673 LSM14AQ8ND56 463 aaKnown RBP10.18□□□□□ -0.78
CLK3-205ENST00000561673 OR4D9Q8NGE8 314 aa10.18□□□□□ -0.78
CLK3-205ENST00000561673 SLC37A2Q8TED4 501 aa10.18□□□□□ -0.78
CLK3-205ENST00000561673 SNRNP27Q8WVK2 155 aaKnown RBP10.18□□□□□ -0.78
CLK3-205ENST00000561673 KRT35Q92764 455 aa10.18□□□□□ -0.78
CLK3-205ENST00000561673 P3H4Q92791 437 aa10.18□□□□□ -0.78
CLK3-205ENST00000561673 USP7Q93009 1102 aa10.18□□□□□ -0.78
CLK3-205ENST00000561673 HAUS1Q96CS2 278 aa10.18□□□□□ -0.78
CLK3-205ENST00000561673 ZSCAN5AQ9BUG6 496 aa10.18□□□□□ -0.78
CLK3-205ENST00000561673 HEMGNQ9BXL5 484 aa10.18□□□□□ -0.78
CLK3-205ENST00000561673 GPR63Q9BZJ6 419 aa10.18□□□□□ -0.78
CLK3-205ENST00000561673 OR2AG1Q9H205 316 aa10.18□□□□□ -0.78
CLK3-205ENST00000561673 CARD9Q9H257 536 aa10.18□□□□□ -0.78
CLK3-205ENST00000561673 TRIM39Q9HCM9 518 aa10.18□□□□□ -0.78
CLK3-205ENST00000561673 KCNK4Q9NYG8 393 aa10.18□□□□□ -0.78
CLK3-205ENST00000561673 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.18□□□□□ -0.78
CLK3-205ENST00000561673 FAM153AQ9UHL3 310 aa10.18□□□□□ -0.78
CLK3-205ENST00000561673 ACSL6Q9UKU0 697 aa10.18□□□□□ -0.78
CLK3-205ENST00000561673 SPO11Q9Y5K1 396 aa10.18□□□□□ -0.78
CLK3-205ENST00000561673 DUSP10Q9Y6W6 482 aa10.18□□□□□ -0.78
CLK3-205ENST00000561673 CFAP46Q8IYW2 2715 aa10.18□□□□□ -0.78
CLK3-205ENST00000561673 LOC285095A0A1B0GVY8 99 aa10.17□□□□□ -0.78
CLK3-205ENST00000561673 A6NCN8 305 aa10.17□□□□□ -0.78
CLK3-205ENST00000561673 SOWAHDA6NJG2 315 aa10.17□□□□□ -0.78
CLK3-205ENST00000561673 F5H423 210 aaPredicted RBP10.17□□□□□ -0.78
CLK3-205ENST00000561673 ERVH48-1M5A8F1 160 aa10.17□□□□□ -0.78
CLK3-205ENST00000561673 HAX1O00165 279 aa10.17□□□□□ -0.78
CLK3-205ENST00000561673 HGSO14964 777 aaPredicted RBP10.17□□□□□ -0.78
CLK3-205ENST00000561673 MTSS1O43312 755 aa10.17□□□□□ -0.78
CLK3-205ENST00000561673 SNX2O60749 519 aa10.17□□□□□ -0.78
CLK3-205ENST00000561673 C1QL1O75973 258 aa10.17□□□□□ -0.78
CLK3-205ENST00000561673 CCL4P13236 92 aa10.17□□□□□ -0.78
CLK3-205ENST00000561673 NFKB1P19838 968 aa10.17□□□□□ -0.78
CLK3-205ENST00000561673 CSF2RBP32927 897 aa10.17□□□□□ -0.78
CLK3-205ENST00000561673 CYLC1P35663 651 aaPredicted RBP10.17□□□□□ -0.78
CLK3-205ENST00000561673 ZNF75DP51815 510 aa10.17□□□□□ -0.78
CLK3-205ENST00000561673 WNT3AP56704 352 aa10.17□□□□□ -0.78
CLK3-205ENST00000561673 GPLD1P80108 840 aa10.17□□□□□ -0.78
CLK3-205ENST00000561673 HHEXQ03014 270 aa10.17□□□□□ -0.78
CLK3-205ENST00000561673 NFATC2Q13469 925 aa10.17□□□□□ -0.78
CLK3-205ENST00000561673 NOMO1Q15155 1222 aa10.17□□□□□ -0.78
CLK3-205ENST00000561673 TGIF1Q15583 401 aa10.17□□□□□ -0.78
CLK3-205ENST00000561673 SIRPB2Q5JXA9 342 aa10.17□□□□□ -0.78
CLK3-205ENST00000561673 ZNF569Q5MCW4 686 aa10.17□□□□□ -0.78
CLK3-205ENST00000561673 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.17□□□□□ -0.78
CLK3-205ENST00000561673 C11orf63Q6NUN7 778 aa10.17□□□□□ -0.78
CLK3-205ENST00000561673 KDELC1Q6UW63 502 aa10.17□□□□□ -0.78
CLK3-205ENST00000561673 CCDC81Q6ZN84 652 aa10.17□□□□□ -0.78
CLK3-205ENST00000561673 DAAM2Q86T65 1068 aa10.17□□□□□ -0.78
CLK3-205ENST00000561673 CCDC50Q8IVM0 306 aa10.17□□□□□ -0.78
CLK3-205ENST00000561673 ZNF567Q8N184 647 aa10.17□□□□□ -0.78
CLK3-205ENST00000561673 TRAM1L1Q8N609 369 aa10.17□□□□□ -0.78
CLK3-205ENST00000561673 GLYATL1Q969I3 302 aa10.17□□□□□ -0.78
CLK3-205ENST00000561673 CCDC74BQ96LY2 380 aa10.17□□□□□ -0.78
CLK3-205ENST00000561673 PANX2Q96RD6 677 aa10.17□□□□□ -0.78
CLK3-205ENST00000561673 CCNL2Q96S94 520 aaPredicted RBP10.17□□□□□ -0.78
CLK3-205ENST00000561673 SRPK1Q96SB4 655 aaKnown RBP10.17□□□□□ -0.78
CLK3-205ENST00000561673 SLC38A3Q99624 504 aa10.17□□□□□ -0.78
CLK3-205ENST00000561673 RBSNQ9H1K0 784 aa10.17□□□□□ -0.78
CLK3-205ENST00000561673 C10orf88Q9H8K7 445 aa10.17□□□□□ -0.78
CLK3-205ENST00000561673 BPIFA1Q9NP55 256 aa10.17□□□□□ -0.78
CLK3-205ENST00000561673 SARS2Q9NP81 518 aaKnown RBP10.17□□□□□ -0.78
CLK3-205ENST00000561673 PRDM8Q9NQV8 689 aa10.17□□□□□ -0.78
CLK3-205ENST00000561673 RAD18Q9NS91 495 aa10.17□□□□□ -0.78
CLK3-205ENST00000561673 FOXJ2Q9P0K8 574 aa10.17□□□□□ -0.78
CLK3-205ENST00000561673 AKAP7Q9P0M2 348 aaPredicted RBP10.17□□□□□ -0.78
CLK3-205ENST00000561673 TMEM9Q9P0T7 183 aa10.17□□□□□ -0.78
CLK3-205ENST00000561673 NFKBIL1Q9UBC1 381 aaPredicted RBP10.17□□□□□ -0.78
CLK3-205ENST00000561673 TMPRSS11EQ9UL52 423 aa10.17□□□□□ -0.78
CLK3-205ENST00000561673 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.17□□□□□ -0.78
CLK3-205ENST00000561673 ADGRG1Q9Y653 693 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms