RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 HAUS2Q9NVX0 235 aa11.71□□□□□ -0.53
CARMIL3-204ENST00000561354 CPNE7Q9UBL6 633 aa11.71□□□□□ -0.53
CARMIL3-204ENST00000561354 CHKBQ9Y259 395 aa11.71□□□□□ -0.53
CARMIL3-204ENST00000561354 PRKAB1Q9Y478 270 aa11.71□□□□□ -0.53
CARMIL3-204ENST00000561354 OAS3Q9Y6K5 1087 aaKnown RBP11.71□□□□□ -0.53
CARMIL3-204ENST00000561354 MN1Q10571 1320 aaPredicted RBP11.7□□□□□ -0.54
CARMIL3-204ENST00000561354 LILRA5A6NI73 299 aa11.7□□□□□ -0.54
CARMIL3-204ENST00000561354 FADS2P1A8MWK0 482 aa11.7□□□□□ -0.54
CARMIL3-204ENST00000561354 MATN3O15232 486 aa11.7□□□□□ -0.54
CARMIL3-204ENST00000561354 NUAK1O60285 661 aa11.7□□□□□ -0.54
CARMIL3-204ENST00000561354 GP1BBP13224 206 aa11.7□□□□□ -0.54
CARMIL3-204ENST00000561354 ACP5P13686 325 aa11.7□□□□□ -0.54
CARMIL3-204ENST00000561354 CCNCP24863 283 aa11.7□□□□□ -0.54
CARMIL3-204ENST00000561354 STAT5AP42229 794 aa11.7□□□□□ -0.54
CARMIL3-204ENST00000561354 NOP2P46087 812 aaKnown RBP11.7□□□□□ -0.54
CARMIL3-204ENST00000561354 SPINT3P49223 89 aa11.7□□□□□ -0.54
CARMIL3-204ENST00000561354 ZNF165P49910 485 aa11.7□□□□□ -0.54
CARMIL3-204ENST00000561354 DSC2Q02487 901 aa11.7□□□□□ -0.54
CARMIL3-204ENST00000561354 SLC25A11Q02978 314 aaKnown RBP11.7□□□□□ -0.54
CARMIL3-204ENST00000561354 KRT81Q14533 505 aa11.7□□□□□ -0.54
CARMIL3-204ENST00000561354 PAFAH1B3Q15102 231 aaKnown RBP11.7□□□□□ -0.54
CARMIL3-204ENST00000561354 DEFB109BQ30KR1 87 aa11.7□□□□□ -0.54
CARMIL3-204ENST00000561354 LACTB2Q53H82 288 aaPredicted RBP11.7□□□□□ -0.54
CARMIL3-204ENST00000561354 HENMT1Q5T8I9 393 aaKnown RBP11.7□□□□□ -0.54
CARMIL3-204ENST00000561354 AOPEPQ8N6M6 819 aa11.7□□□□□ -0.54
CARMIL3-204ENST00000561354 TSGA13Q96PP4 275 aa11.7□□□□□ -0.54
CARMIL3-204ENST00000561354 CARD9Q9H257 536 aa11.7□□□□□ -0.54
CARMIL3-204ENST00000561354 FAM83DQ9H4H8 585 aa11.7□□□□□ -0.54
CARMIL3-204ENST00000561354 UCK1Q9HA47 277 aa11.7□□□□□ -0.54
CARMIL3-204ENST00000561354 RBM22Q9NW64 420 aaKnown RBP eCLIP11.7□□□□□ -0.54
CARMIL3-204ENST00000561354 SIDT1Q9NXL6 827 aaKnown RBP11.7□□□□□ -0.54
CARMIL3-204ENST00000561354 IP6K2Q9UHH9 426 aa11.7□□□□□ -0.54
CARMIL3-204ENST00000561354 KCNK6Q9Y257 313 aa11.7□□□□□ -0.54
CARMIL3-204ENST00000561354 KCTD3Q9Y597 815 aa11.7□□□□□ -0.54
CARMIL3-204ENST00000561354 C1orf232A0A0U1RR37 186 aa11.69□□□□□ -0.54
CARMIL3-204ENST00000561354 GPR89AB7ZAQ6 455 aa11.69□□□□□ -0.54
CARMIL3-204ENST00000561354 TOX3O15405 576 aaPredicted RBP11.69□□□□□ -0.54
CARMIL3-204ENST00000561354 GRID2O43424 1007 aa11.69□□□□□ -0.54
CARMIL3-204ENST00000561354 MFSD11O43934 449 aa11.69□□□□□ -0.54
CARMIL3-204ENST00000561354 SNX2O60749 519 aa11.69□□□□□ -0.54
CARMIL3-204ENST00000561354 C9P02748 559 aa11.69□□□□□ -0.54
CARMIL3-204ENST00000561354 GPR89BP0CG08 455 aa11.69□□□□□ -0.54
CARMIL3-204ENST00000561354 XRCC1P18887 633 aaPredicted RBP11.69□□□□□ -0.54
CARMIL3-204ENST00000561354 MAPK9P45984 424 aa11.69□□□□□ -0.54
CARMIL3-204ENST00000561354 ARSEP51690 589 aa11.69□□□□□ -0.54
CARMIL3-204ENST00000561354 UBE2IP63279 158 aaKnown RBP11.69□□□□□ -0.54
CARMIL3-204ENST00000561354 KLRB1Q12918 225 aa11.69□□□□□ -0.54
CARMIL3-204ENST00000561354 IFI16Q16666 785 aaKnown RBP11.69□□□□□ -0.54
CARMIL3-204ENST00000561354 FILIP1LQ4L180 1135 aa11.69□□□□□ -0.54
CARMIL3-204ENST00000561354 ANKRD20A8PQ5CZ79 823 aa11.69□□□□□ -0.54
CARMIL3-204ENST00000561354 CCDC122Q5T0U0 273 aa11.69□□□□□ -0.54
CARMIL3-204ENST00000561354 NCBP2-AS2Q69YL0 99 aa11.69□□□□□ -0.54
CARMIL3-204ENST00000561354 PHYKPLQ8IUZ5 450 aa11.69□□□□□ -0.54
CARMIL3-204ENST00000561354 RNF214Q8ND24 703 aa11.69□□□□□ -0.54
CARMIL3-204ENST00000561354 CCHCR1Q8TD31 782 aa11.69□□□□□ -0.54
CARMIL3-204ENST00000561354 C9orf72Q96LT7 481 aa11.69□□□□□ -0.54
CARMIL3-204ENST00000561354 TBC1D10AQ9BXI6 508 aa11.69□□□□□ -0.54
CARMIL3-204ENST00000561354 NAT10Q9H0A0 1025 aaKnown RBP11.69□□□□□ -0.54
CARMIL3-204ENST00000561354 PCDH9Q9HC56 1237 aa11.69□□□□□ -0.54
CARMIL3-204ENST00000561354 PKD2L2Q9NZM6 624 aa11.69□□□□□ -0.54
CARMIL3-204ENST00000561354 KLHL3Q9UH77 587 aa11.69□□□□□ -0.54
CARMIL3-204ENST00000561354 PCDHB3Q9Y5E6 796 aa11.69□□□□□ -0.54
CARMIL3-204ENST00000561354 ADGRG1Q9Y653 693 aa11.69□□□□□ -0.54
CARMIL3-204ENST00000561354 KCNMB2Q9Y691 235 aa11.69□□□□□ -0.54
CARMIL3-204ENST00000561354 RPS6KL1Q9Y6S9 549 aa11.69□□□□□ -0.54
CARMIL3-204ENST00000561354 PRR19A6NJB7 356 aa11.68□□□□□ -0.54
CARMIL3-204ENST00000561354 ANKRD66B4E2M5 251 aa11.68□□□□□ -0.54
CARMIL3-204ENST00000561354 CD48P09326 243 aa11.68□□□□□ -0.54
CARMIL3-204ENST00000561354 SKILP12757 684 aa11.68□□□□□ -0.54
CARMIL3-204ENST00000561354 CD97P48960 835 aa11.68□□□□□ -0.54
CARMIL3-204ENST00000561354 NIPAL4Q0D2K0 466 aa11.68□□□□□ -0.54
CARMIL3-204ENST00000561354 MMRN1Q13201 1228 aa11.68□□□□□ -0.54
CARMIL3-204ENST00000561354 IL11RAQ14626 422 aa11.68□□□□□ -0.54
CARMIL3-204ENST00000561354 C16orf46Q6P387 395 aa11.68□□□□□ -0.54
CARMIL3-204ENST00000561354 FAM26EQ8N5C1 309 aa11.68□□□□□ -0.54
CARMIL3-204ENST00000561354 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.68□□□□□ -0.54
CARMIL3-204ENST00000561354 LPCAT1Q8NF37 534 aa11.68□□□□□ -0.54
CARMIL3-204ENST00000561354 PLEKHG4BQ96PX9 1271 aa11.68□□□□□ -0.54
CARMIL3-204ENST00000561354 MLPHQ9BV36 600 aaPredicted RBP11.68□□□□□ -0.54
CARMIL3-204ENST00000561354 ULBP3Q9BZM4 244 aa11.68□□□□□ -0.54
CARMIL3-204ENST00000561354 TRIM39Q9HCM9 518 aa11.68□□□□□ -0.54
CARMIL3-204ENST00000561354 PRDM8Q9NQV8 689 aa11.68□□□□□ -0.54
CARMIL3-204ENST00000561354 OGFRQ9NZT2 677 aa11.68□□□□□ -0.54
CARMIL3-204ENST00000561354 ATXN10Q9UBB4 475 aa11.68□□□□□ -0.54
CARMIL3-204ENST00000561354 ANAPC7Q9UJX3 599 aa11.68□□□□□ -0.54
CARMIL3-204ENST00000561354 MAN2B2Q9Y2E5 1009 aa11.68□□□□□ -0.54
CARMIL3-204ENST00000561354 TTLL3Q9Y4R7 772 aa11.68□□□□□ -0.54
CARMIL3-204ENST00000561354 BZW2Q9Y6E2 419 aaKnown RBP11.68□□□□□ -0.54
CARMIL3-204ENST00000561354 CHUKO15111 745 aa11.67□□□□□ -0.54
CARMIL3-204ENST00000561354 UBXN7O94888 489 aa11.67□□□□□ -0.54
CARMIL3-204ENST00000561354 RECKO95980 971 aa11.67□□□□□ -0.54
CARMIL3-204ENST00000561354 HLA-DQB2P05538 268 aa11.67□□□□□ -0.54
CARMIL3-204ENST00000561354 ZNF28P17035 718 aa11.67□□□□□ -0.54
CARMIL3-204ENST00000561354 ZNF8P17098 575 aaPredicted RBP11.67□□□□□ -0.54
CARMIL3-204ENST00000561354 F8A1P23610 371 aa11.67□□□□□ -0.54
CARMIL3-204ENST00000561354 DLSTP36957 453 aa11.67□□□□□ -0.54
CARMIL3-204ENST00000561354 GFERP55789 205 aa11.67□□□□□ -0.54
CARMIL3-204ENST00000561354 FOXM1Q08050 763 aa11.67□□□□□ -0.54
CARMIL3-204ENST00000561354 DPYSL3Q14195 570 aa11.67□□□□□ -0.54
CARMIL3-204ENST00000561354 QPCTQ16769 361 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms