RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 BSNQ9UPA5 3926 aa15.82■□□□□ 0.12
LMX1B-204ENST00000561065 SDK2Q58EX2 2172 aa15.82■□□□□ 0.12
LMX1B-204ENST00000561065 hCG_1818297A0A087WSY0 165 aa15.82■□□□□ 0.12
LMX1B-204ENST00000561065 RGSL1A5PLK6 1076 aa15.82■□□□□ 0.12
LMX1B-204ENST00000561065 RCCD1A6NED2 376 aa15.82■□□□□ 0.12
LMX1B-204ENST00000561065 EIF3IQ13347 325 aaKnown RBP15.82■□□□□ 0.12
LMX1B-204ENST00000561065 NOMO1Q15155 1222 aa15.82■□□□□ 0.12
LMX1B-204ENST00000561065 SLC14A2Q15849 920 aa15.82■□□□□ 0.12
LMX1B-204ENST00000561065 AMZ1Q400G9 498 aa15.82■□□□□ 0.12
LMX1B-204ENST00000561065 ZNF648Q5T619 568 aaPredicted RBP15.82■□□□□ 0.12
LMX1B-204ENST00000561065 ALS2CLQ60I27 953 aa15.82■□□□□ 0.12
LMX1B-204ENST00000561065 ZNF574Q6ZN55 896 aaPredicted RBP15.82■□□□□ 0.12
LMX1B-204ENST00000561065 GPR155Q7Z3F1 870 aa15.82■□□□□ 0.12
LMX1B-204ENST00000561065 ZNF761Q86XN6 746 aaPredicted RBP15.82■□□□□ 0.12
LMX1B-204ENST00000561065 TTC13Q8NBP0 860 aa15.82■□□□□ 0.12
LMX1B-204ENST00000561065 GPR26Q8NDV2 337 aa15.82■□□□□ 0.12
LMX1B-204ENST00000561065 ACRBPQ8NEB7 543 aa15.82■□□□□ 0.12
LMX1B-204ENST00000561065 SLC37A2Q8TED4 501 aa15.82■□□□□ 0.12
LMX1B-204ENST00000561065 PPP1R2P1Q96PQ5 205 aa15.82■□□□□ 0.12
LMX1B-204ENST00000561065 HERPUD2Q9BSE4 406 aa15.82■□□□□ 0.12
LMX1B-204ENST00000561065 STRADBQ9C0K7 418 aa15.82■□□□□ 0.12
LMX1B-204ENST00000561065 FAM83DQ9H4H8 585 aa15.82■□□□□ 0.12
LMX1B-204ENST00000561065 ARFGAP3Q9NP61 516 aa15.82■□□□□ 0.12
LMX1B-204ENST00000561065 RAD18Q9NS91 495 aa15.82■□□□□ 0.12
LMX1B-204ENST00000561065 UBP1Q9NZI7 540 aa15.82■□□□□ 0.12
LMX1B-204ENST00000561065 PISDQ9UG56 409 aa15.82■□□□□ 0.12
LMX1B-204ENST00000561065 MACROD2A1Z1Q3 448 aa15.81■□□□□ 0.12
LMX1B-204ENST00000561065 A6NCN8 305 aa15.81■□□□□ 0.12
LMX1B-204ENST00000561065 RHPN2P1A8MT19 583 aa15.81■□□□□ 0.12
LMX1B-204ENST00000561065 F5H423 210 aaPredicted RBP15.81■□□□□ 0.12
LMX1B-204ENST00000561065 APOC4-APOC2K7ER74 178 aa15.81■□□□□ 0.12
LMX1B-204ENST00000561065 AURKAO14965 403 aa15.81■□□□□ 0.12
LMX1B-204ENST00000561065 C1QL1O75973 258 aa15.81■□□□□ 0.12
LMX1B-204ENST00000561065 ASMTLO95671 621 aa15.81■□□□□ 0.12
LMX1B-204ENST00000561065 APOC2P02655 101 aa15.81■□□□□ 0.12
LMX1B-204ENST00000561065 PRB1P04280 392 aa15.81■□□□□ 0.12
LMX1B-204ENST00000561065 CD1CP29017 333 aa15.81■□□□□ 0.12
LMX1B-204ENST00000561065 ALDH4A1P30038 563 aa15.81■□□□□ 0.12
LMX1B-204ENST00000561065 SLC5A2P31639 672 aa15.81■□□□□ 0.12
LMX1B-204ENST00000561065 PTPN7P35236 360 aa15.81■□□□□ 0.12
LMX1B-204ENST00000561065 TMPRSS3P57727 454 aa15.81■□□□□ 0.12
LMX1B-204ENST00000561065 DCDC1P59894 354 aa15.81■□□□□ 0.12
LMX1B-204ENST00000561065 CFHR1Q03591 330 aa15.81■□□□□ 0.12
LMX1B-204ENST00000561065 NKAIN2Q5VXU1 208 aa15.81■□□□□ 0.12
LMX1B-204ENST00000561065 BBS12Q6ZW61 710 aa15.81■□□□□ 0.12
LMX1B-204ENST00000561065 TEKT5Q96M29 485 aa15.81■□□□□ 0.12
LMX1B-204ENST00000561065 OSBPL8Q9BZF1 889 aa15.81■□□□□ 0.12
LMX1B-204ENST00000561065 DPH1Q9BZG8 443 aa15.81■□□□□ 0.12
LMX1B-204ENST00000561065 LACRTQ9GZZ8 138 aa15.81■□□□□ 0.12
LMX1B-204ENST00000561065 ZFYVE1Q9HBF4 777 aa15.81■□□□□ 0.12
LMX1B-204ENST00000561065 NFKBIL1Q9UBC1 381 aaPredicted RBP15.81■□□□□ 0.12
LMX1B-204ENST00000561065 KCNK6Q9Y257 313 aa15.81■□□□□ 0.12
LMX1B-204ENST00000561065 REXO2Q9Y3B8 237 aaKnown RBP15.81■□□□□ 0.12
LMX1B-204ENST00000561065 PCDHGA7Q9Y5G6 932 aa15.81■□□□□ 0.12
LMX1B-204ENST00000561065 ADGRG1Q9Y653 693 aa15.81■□□□□ 0.12
LMX1B-204ENST00000561065 DUSP10Q9Y6W6 482 aa15.81■□□□□ 0.12
LMX1B-204ENST00000561065 CFAP46Q8IYW2 2715 aa15.8■□□□□ 0.12
LMX1B-204ENST00000561065 IGHV1OR21-1A0A087WYE8 117 aa15.8■□□□□ 0.12
LMX1B-204ENST00000561065 TMX2-CTNND1H3BSU7 103 aa15.8■□□□□ 0.12
LMX1B-204ENST00000561065 H7C0C1 242 aa15.8■□□□□ 0.12
LMX1B-204ENST00000561065 ATXN7O15265 892 aaPredicted RBP15.8■□□□□ 0.12
LMX1B-204ENST00000561065 PMPCBO75439 489 aa15.8■□□□□ 0.12
LMX1B-204ENST00000561065 CPNE6O95741 557 aa15.8■□□□□ 0.12
LMX1B-204ENST00000561065 NFKB1P19838 968 aa15.8■□□□□ 0.12
LMX1B-204ENST00000561065 ATP5OP48047 213 aa15.8■□□□□ 0.12
LMX1B-204ENST00000561065 CDK18Q07002 472 aa15.8■□□□□ 0.12
LMX1B-204ENST00000561065 SRSF6Q13247 344 aaKnown RBP15.8■□□□□ 0.12
LMX1B-204ENST00000561065 LRP8Q14114 963 aa15.8■□□□□ 0.12
LMX1B-204ENST00000561065 PHF19Q5T6S3 580 aa15.8■□□□□ 0.12
LMX1B-204ENST00000561065 ARHGAP40Q5TG30 622 aa15.8■□□□□ 0.12
LMX1B-204ENST00000561065 KDELC1Q6UW63 502 aa15.8■□□□□ 0.12
LMX1B-204ENST00000561065 USP53Q70EK8 1073 aa15.8■□□□□ 0.12
LMX1B-204ENST00000561065 PID1Q7Z2X4 250 aa15.8■□□□□ 0.12
LMX1B-204ENST00000561065 TMC3Q7Z5M5 1100 aa15.8■□□□□ 0.12
LMX1B-204ENST00000561065 SFRP1Q8N474 314 aa15.8■□□□□ 0.12
LMX1B-204ENST00000561065 RCBTB1Q8NDN9 531 aa15.8■□□□□ 0.12
LMX1B-204ENST00000561065 HTR3CQ8WXA8 447 aa15.8■□□□□ 0.12
LMX1B-204ENST00000561065 PMEPA1Q969W9 287 aa15.8■□□□□ 0.12
LMX1B-204ENST00000561065 OXNAD1Q96HP4 312 aaPredicted RBP15.8■□□□□ 0.12
LMX1B-204ENST00000561065 QKIQ96PU8 341 aaKnown RBP eCLIP15.8■□□□□ 0.12
LMX1B-204ENST00000561065 HEMGNQ9BXL5 484 aa15.8■□□□□ 0.12
LMX1B-204ENST00000561065 MAGEE1Q9HCI5 957 aa15.8■□□□□ 0.12
LMX1B-204ENST00000561065 FOXJ2Q9P0K8 574 aa15.8■□□□□ 0.12
LMX1B-204ENST00000561065 TMEM9Q9P0T7 183 aa15.8■□□□□ 0.12
LMX1B-204ENST00000561065 ATXN10Q9UBB4 475 aa15.8■□□□□ 0.12
LMX1B-204ENST00000561065 TBC1D29Q9UFV1 150 aa15.8■□□□□ 0.12
LMX1B-204ENST00000561065 ACSL6Q9UKU0 697 aa15.8■□□□□ 0.12
LMX1B-204ENST00000561065 TRBV23OR9-2A0A075B6M9 112 aa15.79■□□□□ 0.12
LMX1B-204ENST00000561065 PRAMEF33A0A0G2JMD5 474 aa15.79■□□□□ 0.12
LMX1B-204ENST00000561065 IGHV5-10-1A0A0J9YXX1 117 aa15.79■□□□□ 0.12
LMX1B-204ENST00000561065 TEX51A0A1B0GUA7 166 aa15.79■□□□□ 0.12
LMX1B-204ENST00000561065 PRAMEF10O60809 474 aa15.79■□□□□ 0.12
LMX1B-204ENST00000561065 NDST3O95803 873 aa15.79■□□□□ 0.12
LMX1B-204ENST00000561065 EPOP01588 193 aa15.79■□□□□ 0.12
LMX1B-204ENST00000561065 JMJD7P0C870 316 aa15.79■□□□□ 0.12
LMX1B-204ENST00000561065 ACP5P13686 325 aa15.79■□□□□ 0.12
LMX1B-204ENST00000561065 ZNF8P17098 575 aaPredicted RBP15.79■□□□□ 0.12
LMX1B-204ENST00000561065 BPIP17213 487 aa15.79■□□□□ 0.12
LMX1B-204ENST00000561065 CHRNA4P43681 627 aa15.79■□□□□ 0.12
LMX1B-204ENST00000561065 FASLGP48023 281 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms