RNA–Protein interactions for RNA: ENST00000560628.1

LDLR-214, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-214ENST00000560628 TMC3Q7Z5M5 1100 aa10.12□□□□□ -0.79
LDLR-214ENST00000560628 VSIG1Q86XK7 387 aa10.12□□□□□ -0.79
LDLR-214ENST00000560628 CNGA4Q8IV77 575 aa10.12□□□□□ -0.79
LDLR-214ENST00000560628 RAVER1Q8IY67 606 aaKnown RBP10.12□□□□□ -0.79
LDLR-214ENST00000560628 SFRP1Q8N474 314 aa10.12□□□□□ -0.79
LDLR-214ENST00000560628 OR4D9Q8NGE8 314 aa10.12□□□□□ -0.79
LDLR-214ENST00000560628 PMEPA1Q969W9 287 aa10.12□□□□□ -0.79
LDLR-214ENST00000560628 WBP1Q96G27 269 aa10.12□□□□□ -0.79
LDLR-214ENST00000560628 AHCYL2Q96HN2 611 aaKnown RBP10.12□□□□□ -0.79
LDLR-214ENST00000560628 OLFM3Q96PB7 478 aa10.12□□□□□ -0.79
LDLR-214ENST00000560628 ZMYND15Q9H091 742 aa10.12□□□□□ -0.79
LDLR-214ENST00000560628 OR2AG1Q9H205 316 aa10.12□□□□□ -0.79
LDLR-214ENST00000560628 MAGEE1Q9HCI5 957 aa10.12□□□□□ -0.79
LDLR-214ENST00000560628 TRIM39Q9HCM9 518 aa10.12□□□□□ -0.79
LDLR-214ENST00000560628 BPIFA1Q9NP55 256 aa10.12□□□□□ -0.79
LDLR-214ENST00000560628 PRDM8Q9NQV8 689 aa10.12□□□□□ -0.79
LDLR-214ENST00000560628 VPS18Q9P253 973 aa10.12□□□□□ -0.79
LDLR-214ENST00000560628 ACSL6Q9UKU0 697 aa10.12□□□□□ -0.79
LDLR-214ENST00000560628 INTUQ9ULD6 942 aa10.12□□□□□ -0.79
LDLR-214ENST00000560628 PCDHB11Q9Y5F2 797 aa10.12□□□□□ -0.79
LDLR-214ENST00000560628 ALG6Q9Y672 507 aa10.12□□□□□ -0.79
LDLR-214ENST00000560628 AHCTF1Q8WYP5 2266 aa10.11□□□□□ -0.79
LDLR-214ENST00000560628 A0A0A6YYK5 440 aaPredicted RBP10.11□□□□□ -0.79
LDLR-214ENST00000560628 AURKAO14965 403 aa10.11□□□□□ -0.79
LDLR-214ENST00000560628 NUAK1O60285 661 aa10.11□□□□□ -0.79
LDLR-214ENST00000560628 MTX2O75431 263 aa10.11□□□□□ -0.79
LDLR-214ENST00000560628 NDST3O95803 873 aa10.11□□□□□ -0.79
LDLR-214ENST00000560628 BPIP17213 487 aa10.11□□□□□ -0.79
LDLR-214ENST00000560628 WT1P19544 449 aaPredicted RBP10.11□□□□□ -0.79
LDLR-214ENST00000560628 CSTF2P33240 577 aaKnown RBP eCLIP10.11□□□□□ -0.79
LDLR-214ENST00000560628 MAPK9P45984 424 aa10.11□□□□□ -0.79
LDLR-214ENST00000560628 FASLGP48023 281 aa10.11□□□□□ -0.79
LDLR-214ENST00000560628 HHEXQ03014 270 aa10.11□□□□□ -0.79
LDLR-214ENST00000560628 ADCY2Q08462 1091 aa10.11□□□□□ -0.79
LDLR-214ENST00000560628 SQSTM1Q13501 440 aa10.11□□□□□ -0.79
LDLR-214ENST00000560628 TFDP2Q14188 446 aa10.11□□□□□ -0.79
LDLR-214ENST00000560628 NOMO1Q15155 1222 aa10.11□□□□□ -0.79
LDLR-214ENST00000560628 TCEAL1Q15170 157 aa10.11□□□□□ -0.79
LDLR-214ENST00000560628 CLPPQ16740 277 aaPredicted RBP10.11□□□□□ -0.79
LDLR-214ENST00000560628 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.11□□□□□ -0.79
LDLR-214ENST00000560628 CCDC70Q6NSX1 233 aa10.11□□□□□ -0.79
LDLR-214ENST00000560628 TMEM71Q6P5X7 295 aa10.11□□□□□ -0.79
LDLR-214ENST00000560628 CRTC3Q6UUV7 619 aa10.11□□□□□ -0.79
LDLR-214ENST00000560628 SPOCD1Q6ZMY3 1216 aa10.11□□□□□ -0.79
LDLR-214ENST00000560628 ADGRG6Q86SQ4 1221 aa10.11□□□□□ -0.79
LDLR-214ENST00000560628 ZNF605Q86T29 641 aa10.11□□□□□ -0.79
LDLR-214ENST00000560628 FAM129CQ86XR2 697 aa10.11□□□□□ -0.79
LDLR-214ENST00000560628 OR10G6Q8NH81 332 aa10.11□□□□□ -0.79
LDLR-214ENST00000560628 TFB1MQ8WVM0 346 aaKnown RBP10.11□□□□□ -0.79
LDLR-214ENST00000560628 NCSTNQ92542 709 aa10.11□□□□□ -0.79
LDLR-214ENST00000560628 ART4Q93070 314 aa10.11□□□□□ -0.79
LDLR-214ENST00000560628 TADA1Q96BN2 335 aa10.11□□□□□ -0.79
LDLR-214ENST00000560628 HAUS1Q96CS2 278 aa10.11□□□□□ -0.79
LDLR-214ENST00000560628 TEKT5Q96M29 485 aa10.11□□□□□ -0.79
LDLR-214ENST00000560628 TAAR9Q96RI9 348 aa10.11□□□□□ -0.79
LDLR-214ENST00000560628 ANP32EQ9BTT0 268 aa10.11□□□□□ -0.79
LDLR-214ENST00000560628 TRIM5Q9C035 493 aa10.11□□□□□ -0.79
LDLR-214ENST00000560628 CARD9Q9H257 536 aa10.11□□□□□ -0.79
LDLR-214ENST00000560628 RMI1Q9H9A7 625 aa10.11□□□□□ -0.79
LDLR-214ENST00000560628 KLC4Q9NSK0 619 aa10.11□□□□□ -0.79
LDLR-214ENST00000560628 OCIAD1Q9NX40 245 aa10.11□□□□□ -0.79
LDLR-214ENST00000560628 SLC39A1Q9NY26 324 aa10.11□□□□□ -0.79
LDLR-214ENST00000560628 SLC23A2Q9UGH3 650 aa10.11□□□□□ -0.79
LDLR-214ENST00000560628 ZNF711Q9Y462 761 aa10.11□□□□□ -0.79
LDLR-214ENST00000560628 SPO11Q9Y5K1 396 aa10.11□□□□□ -0.79
LDLR-214ENST00000560628 MGAQ8IWI9 3026 aa10.1□□□□□ -0.79
LDLR-214ENST00000560628 EFCAB7A8K855 629 aa10.1□□□□□ -0.79
LDLR-214ENST00000560628 HGSO14964 777 aaPredicted RBP10.1□□□□□ -0.79
LDLR-214ENST00000560628 ZRANB2O95218 330 aaKnown RBP eCLIP10.1□□□□□ -0.79
LDLR-214ENST00000560628 THRAP10827 490 aa10.1□□□□□ -0.79
LDLR-214ENST00000560628 CD68P34810 354 aaPredicted RBP10.1□□□□□ -0.79
LDLR-214ENST00000560628 NR2C2P49116 596 aa10.1□□□□□ -0.79
LDLR-214ENST00000560628 ARSDP51689 593 aa10.1□□□□□ -0.79
LDLR-214ENST00000560628 WNT3AP56704 352 aa10.1□□□□□ -0.79
LDLR-214ENST00000560628 CYP4F2P78329 520 aa10.1□□□□□ -0.79
LDLR-214ENST00000560628 GPLD1P80108 840 aa10.1□□□□□ -0.79
LDLR-214ENST00000560628 WASHC5Q12768 1159 aa10.1□□□□□ -0.79
LDLR-214ENST00000560628 TRA2AQ13595 282 aaKnown RBP eCLIP10.1□□□□□ -0.79
LDLR-214ENST00000560628 PRKD1Q15139 912 aaPredicted RBP10.1□□□□□ -0.79
LDLR-214ENST00000560628 TAZQ16635 292 aa10.1□□□□□ -0.79
LDLR-214ENST00000560628 PLA2G4EQ3MJ16 856 aa10.1□□□□□ -0.79
LDLR-214ENST00000560628 ZNF569Q5MCW4 686 aa10.1□□□□□ -0.79
LDLR-214ENST00000560628 BZW1Q7L1Q6 419 aaKnown RBP10.1□□□□□ -0.79
LDLR-214ENST00000560628 PID1Q7Z2X4 250 aa10.1□□□□□ -0.79
LDLR-214ENST00000560628 SLC9B2Q86UD5 537 aa10.1□□□□□ -0.79
LDLR-214ENST00000560628 ZC3H18Q86VM9 953 aaKnown RBP10.1□□□□□ -0.79
LDLR-214ENST00000560628 DTX1Q86Y01 620 aa10.1□□□□□ -0.79
LDLR-214ENST00000560628 SLC25A41Q8N5S1 370 aa10.1□□□□□ -0.79
LDLR-214ENST00000560628 TRAM1L1Q8N609 369 aa10.1□□□□□ -0.79
LDLR-214ENST00000560628 EXD3Q8N9H8 876 aa10.1□□□□□ -0.79
LDLR-214ENST00000560628 TC2NQ8N9U0 490 aa10.1□□□□□ -0.79
LDLR-214ENST00000560628 AGBL5Q8NDL9 886 aa10.1□□□□□ -0.79
LDLR-214ENST00000560628 P3H4Q92791 437 aa10.1□□□□□ -0.79
LDLR-214ENST00000560628 GLYATL1Q969I3 302 aa10.1□□□□□ -0.79
LDLR-214ENST00000560628 SGF29Q96ES7 293 aa10.1□□□□□ -0.79
LDLR-214ENST00000560628 DPYSL5Q9BPU6 564 aa10.1□□□□□ -0.79
LDLR-214ENST00000560628 ZSCAN5AQ9BUG6 496 aa10.1□□□□□ -0.79
LDLR-214ENST00000560628 TBC1D10AQ9BXI6 508 aa10.1□□□□□ -0.79
LDLR-214ENST00000560628 HEMGNQ9BXL5 484 aa10.1□□□□□ -0.79
LDLR-214ENST00000560628 OSGEPL1Q9H4B0 414 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms