RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 GTF2H3Q13889 308 aa12.84□□□□□ -0.35
CTDSPL2-209ENST00000560620 HLTFQ14527 1009 aaKnown RBP eCLIP12.84□□□□□ -0.35
CTDSPL2-209ENST00000560620 INSCQ1MX18 579 aa12.84□□□□□ -0.35
CTDSPL2-209ENST00000560620 ISXQ2M1V0 245 aa12.84□□□□□ -0.35
CTDSPL2-209ENST00000560620 P3H1Q32P28 736 aa12.84□□□□□ -0.35
CTDSPL2-209ENST00000560620 PLA2G4EQ3MJ16 856 aa12.84□□□□□ -0.35
CTDSPL2-209ENST00000560620 ATP13A5Q4VNC0 1218 aa12.84□□□□□ -0.35
CTDSPL2-209ENST00000560620 CERCAMQ5T4B2 595 aa12.84□□□□□ -0.35
CTDSPL2-209ENST00000560620 CDCP2Q5VXM1 449 aa12.84□□□□□ -0.35
CTDSPL2-209ENST00000560620 CRTC3Q6UUV7 619 aa12.84□□□□□ -0.35
CTDSPL2-209ENST00000560620 PROSER1Q86XN7 944 aa12.84□□□□□ -0.35
CTDSPL2-209ENST00000560620 SLC13A5Q86YT5 568 aaPredicted RBP12.84□□□□□ -0.35
CTDSPL2-209ENST00000560620 CCNJLQ8IV13 435 aa12.84□□□□□ -0.35
CTDSPL2-209ENST00000560620 CACTIN-AS1Q8N1I8 211 aa12.84□□□□□ -0.35
CTDSPL2-209ENST00000560620 TTC30BQ8N4P2 665 aa12.84□□□□□ -0.35
CTDSPL2-209ENST00000560620 SLC35B2Q8TB61 432 aa12.84□□□□□ -0.35
CTDSPL2-209ENST00000560620 C1orf54Q8WWF1 131 aa12.84□□□□□ -0.35
CTDSPL2-209ENST00000560620 PATE1Q8WXA2 126 aa12.84□□□□□ -0.35
CTDSPL2-209ENST00000560620 SCARF2Q96GP6 870 aaPredicted RBP12.84□□□□□ -0.35
CTDSPL2-209ENST00000560620 GORASP1Q9BQQ3 440 aa12.84□□□□□ -0.35
CTDSPL2-209ENST00000560620 NRSN2Q9GZP1 204 aa12.84□□□□□ -0.35
CTDSPL2-209ENST00000560620 ZMYND15Q9H091 742 aa12.84□□□□□ -0.35
CTDSPL2-209ENST00000560620 CARD9Q9H257 536 aa12.84□□□□□ -0.35
CTDSPL2-209ENST00000560620 RMI1Q9H9A7 625 aa12.84□□□□□ -0.35
CTDSPL2-209ENST00000560620 TRIM39Q9HCM9 518 aa12.84□□□□□ -0.35
CTDSPL2-209ENST00000560620 IL26Q9NPH9 171 aa12.84□□□□□ -0.35
CTDSPL2-209ENST00000560620 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.84□□□□□ -0.35
CTDSPL2-209ENST00000560620 IL17CQ9P0M4 197 aa12.84□□□□□ -0.35
CTDSPL2-209ENST00000560620 KCNK6Q9Y257 313 aa12.84□□□□□ -0.35
CTDSPL2-209ENST00000560620 ARL5AQ9Y689 179 aa12.84□□□□□ -0.35
CTDSPL2-209ENST00000560620 WDFY3Q8IZQ1 3526 aa12.84□□□□□ -0.35
CTDSPL2-209ENST00000560620 RP1P56715 2156 aa12.83□□□□□ -0.36
CTDSPL2-209ENST00000560620 ASXL3Q9C0F0 2248 aa12.83□□□□□ -0.36
CTDSPL2-209ENST00000560620 SRRM3A6NNA2 597 aaPredicted RBP12.83□□□□□ -0.36
CTDSPL2-209ENST00000560620 E7EVH7 732 aa12.83□□□□□ -0.36
CTDSPL2-209ENST00000560620 CASC3O15234 703 aaKnown RBP12.83□□□□□ -0.36
CTDSPL2-209ENST00000560620 LIASO43766 372 aa12.83□□□□□ -0.36
CTDSPL2-209ENST00000560620 NUDT21O43809 227 aaKnown RBP12.83□□□□□ -0.36
CTDSPL2-209ENST00000560620 NUAK1O60285 661 aa12.83□□□□□ -0.36
CTDSPL2-209ENST00000560620 UGT1A9O60656 530 aa12.83□□□□□ -0.36
CTDSPL2-209ENST00000560620 PPFIA2O75334 1257 aa12.83□□□□□ -0.36
CTDSPL2-209ENST00000560620 CRTAMO95727 393 aa12.83□□□□□ -0.36
CTDSPL2-209ENST00000560620 UGT1A6P19224 532 aa12.83□□□□□ -0.36
CTDSPL2-209ENST00000560620 LPOP22079 712 aaPredicted RBP12.83□□□□□ -0.36
CTDSPL2-209ENST00000560620 UGT1A1P22309 533 aa12.83□□□□□ -0.36
CTDSPL2-209ENST00000560620 UGT1A4P22310 534 aa12.83□□□□□ -0.36
CTDSPL2-209ENST00000560620 STIP1P31948 543 aaKnown RBP12.83□□□□□ -0.36
CTDSPL2-209ENST00000560620 CXCR5P32302 372 aa12.83□□□□□ -0.36
CTDSPL2-209ENST00000560620 UGT1A3P35503 534 aa12.83□□□□□ -0.36
CTDSPL2-209ENST00000560620 UGT1A5P35504 534 aa12.83□□□□□ -0.36
CTDSPL2-209ENST00000560620 LMAN1P49257 510 aa12.83□□□□□ -0.36
CTDSPL2-209ENST00000560620 GABREP78334 506 aa12.83□□□□□ -0.36
CTDSPL2-209ENST00000560620 ITGA9Q13797 1035 aa12.83□□□□□ -0.36
CTDSPL2-209ENST00000560620 PTPRCAPQ14761 206 aa12.83□□□□□ -0.36
CTDSPL2-209ENST00000560620 CHRNA6Q15825 494 aa12.83□□□□□ -0.36
CTDSPL2-209ENST00000560620 AMZ1Q400G9 498 aa12.83□□□□□ -0.36
CTDSPL2-209ENST00000560620 C3orf38Q5JPI3 329 aa12.83□□□□□ -0.36
CTDSPL2-209ENST00000560620 RANBP10Q6VN20 620 aa12.83□□□□□ -0.36
CTDSPL2-209ENST00000560620 ZNF662Q6ZS27 426 aa12.83□□□□□ -0.36
CTDSPL2-209ENST00000560620 ADGRG6Q86SQ4 1221 aa12.83□□□□□ -0.36
CTDSPL2-209ENST00000560620 TRAPPC5Q8IUR0 188 aa12.83□□□□□ -0.36
CTDSPL2-209ENST00000560620 ARL14Q8N4G2 192 aa12.83□□□□□ -0.36
CTDSPL2-209ENST00000560620 CCDC89Q8N998 374 aa12.83□□□□□ -0.36
CTDSPL2-209ENST00000560620 OR4K2Q8NGD2 314 aa12.83□□□□□ -0.36
CTDSPL2-209ENST00000560620 ATXN7L3BQ96GX2 97 aa12.83□□□□□ -0.36
CTDSPL2-209ENST00000560620 DCBLD2Q96PD2 775 aa12.83□□□□□ -0.36
CTDSPL2-209ENST00000560620 LRRN3Q9H3W5 708 aa12.83□□□□□ -0.36
CTDSPL2-209ENST00000560620 UGT1A7Q9HAW7 530 aa12.83□□□□□ -0.36
CTDSPL2-209ENST00000560620 UGT1A10Q9HAW8 530 aa12.83□□□□□ -0.36
CTDSPL2-209ENST00000560620 UGT1A8Q9HAW9 530 aa12.83□□□□□ -0.36
CTDSPL2-209ENST00000560620 KLC4Q9NSK0 619 aa12.83□□□□□ -0.36
CTDSPL2-209ENST00000560620 NFKBIL1Q9UBC1 381 aaPredicted RBP12.83□□□□□ -0.36
CTDSPL2-209ENST00000560620 APPL1Q9UKG1 709 aa12.83□□□□□ -0.36
CTDSPL2-209ENST00000560620 ST14Q9Y5Y6 855 aa12.83□□□□□ -0.36
CTDSPL2-209ENST00000560620 KNTC1P50748 2209 aa12.82□□□□□ -0.36
CTDSPL2-209ENST00000560620 ARHGEF17Q96PE2 2063 aaPredicted RBP12.82□□□□□ -0.36
CTDSPL2-209ENST00000560620 GPR89AB7ZAQ6 455 aa12.82□□□□□ -0.36
CTDSPL2-209ENST00000560620 AGRPO00253 132 aa12.82□□□□□ -0.36
CTDSPL2-209ENST00000560620 KMOO15229 486 aa12.82□□□□□ -0.36
CTDSPL2-209ENST00000560620 PSMD3O43242 534 aa12.82□□□□□ -0.36
CTDSPL2-209ENST00000560620 VEGFDO43915 354 aa12.82□□□□□ -0.36
CTDSPL2-209ENST00000560620 CEP104O60308 925 aa12.82□□□□□ -0.36
CTDSPL2-209ENST00000560620 BRINP1O60477 761 aa12.82□□□□□ -0.36
CTDSPL2-209ENST00000560620 METTL18O95568 372 aa12.82□□□□□ -0.36
CTDSPL2-209ENST00000560620 FGGP02679 453 aa12.82□□□□□ -0.36
CTDSPL2-209ENST00000560620 GPR89BP0CG08 455 aa12.82□□□□□ -0.36
CTDSPL2-209ENST00000560620 PNLIPP16233 465 aa12.82□□□□□ -0.36
CTDSPL2-209ENST00000560620 AKT1P31749 480 aa12.82□□□□□ -0.36
CTDSPL2-209ENST00000560620 ADRA1AP35348 466 aa12.82□□□□□ -0.36
CTDSPL2-209ENST00000560620 TMPRSS15P98073 1019 aa12.82□□□□□ -0.36
CTDSPL2-209ENST00000560620 PDE1BQ01064 536 aa12.82□□□□□ -0.36
CTDSPL2-209ENST00000560620 TMEM115Q12893 351 aaPredicted RBP12.82□□□□□ -0.36
CTDSPL2-209ENST00000560620 SEPT6Q14141 434 aa12.82□□□□□ -0.36
CTDSPL2-209ENST00000560620 TAF1AQ15573 450 aaPredicted RBP12.82□□□□□ -0.36
CTDSPL2-209ENST00000560620 MAP9Q49MG5 647 aa12.82□□□□□ -0.36
CTDSPL2-209ENST00000560620 GSTA5Q7RTV2 222 aa12.82□□□□□ -0.36
CTDSPL2-209ENST00000560620 SPRED1Q7Z699 444 aa12.82□□□□□ -0.36
CTDSPL2-209ENST00000560620 LRRTM4Q86VH4 590 aa12.82□□□□□ -0.36
CTDSPL2-209ENST00000560620 NAGSQ8N159 534 aa12.82□□□□□ -0.36
CTDSPL2-209ENST00000560620 MAIP1Q8WWC4 291 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms