RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 CSRP3P50461 194 aa8.52□□□□□ -1.05
CCDC33-209ENST00000560565 HNRNPFP52597 415 aaKnown RBP8.52□□□□□ -1.05
CCDC33-209ENST00000560565 EEFSECP57772 596 aaKnown RBP8.52□□□□□ -1.05
CCDC33-209ENST00000560565 PRAMEP78395 509 aa8.52□□□□□ -1.05
CCDC33-209ENST00000560565 NFKB2Q00653 900 aa8.52□□□□□ -1.05
CCDC33-209ENST00000560565 PFKPQ01813 784 aa8.52□□□□□ -1.05
CCDC33-209ENST00000560565 YWHAHQ04917 246 aaPredicted RBP8.52□□□□□ -1.05
CCDC33-209ENST00000560565 DLX2Q07687 328 aaPredicted RBP8.52□□□□□ -1.05
CCDC33-209ENST00000560565 SCAPQ12770 1279 aa8.52□□□□□ -1.05
CCDC33-209ENST00000560565 NFATC3Q12968 1075 aa8.52□□□□□ -1.05
CCDC33-209ENST00000560565 ACAP2Q15057 778 aa8.52□□□□□ -1.05
CCDC33-209ENST00000560565 NFE2Q16621 373 aaPredicted RBP8.52□□□□□ -1.05
CCDC33-209ENST00000560565 DUSP6Q16828 381 aa8.52□□□□□ -1.05
CCDC33-209ENST00000560565 AGKQ53H12 422 aa8.52□□□□□ -1.05
CCDC33-209ENST00000560565 PPM1JQ5JR12 505 aa8.52□□□□□ -1.05
CCDC33-209ENST00000560565 BSPRYQ5W0U4 402 aa8.52□□□□□ -1.05
CCDC33-209ENST00000560565 OVOS1Q6IE37 1185 aa8.52□□□□□ -1.05
CCDC33-209ENST00000560565 DUS1LQ6P1R4 473 aaKnown RBP8.52□□□□□ -1.05
CCDC33-209ENST00000560565 C8orf82Q6P1X6 216 aaPredicted RBP8.52□□□□□ -1.05
CCDC33-209ENST00000560565 FAM171BQ6P995 826 aa8.52□□□□□ -1.05
CCDC33-209ENST00000560565 TUBA3EQ6PEY2 450 aa8.52□□□□□ -1.05
CCDC33-209ENST00000560565 SPATA19Q7Z5L4 167 aa8.52□□□□□ -1.05
CCDC33-209ENST00000560565 TFAP2DQ7Z6R9 452 aa8.52□□□□□ -1.05
CCDC33-209ENST00000560565 ZC3HC1Q86WB0 502 aaKnown RBP8.52□□□□□ -1.05
CCDC33-209ENST00000560565 DCP1BQ8IZD4 617 aaKnown RBP8.52□□□□□ -1.05
CCDC33-209ENST00000560565 MYO1HQ8N1T3 1032 aa8.52□□□□□ -1.05
CCDC33-209ENST00000560565 SCML4Q8N228 414 aa8.52□□□□□ -1.05
CCDC33-209ENST00000560565 TMEM130Q8N3G9 435 aa8.52□□□□□ -1.05
CCDC33-209ENST00000560565 C12orf29Q8N999 325 aa8.52□□□□□ -1.05
CCDC33-209ENST00000560565 KDM1BQ8NB78 822 aa8.52□□□□□ -1.05
CCDC33-209ENST00000560565 PAPD5Q8NDF8 572 aaKnown RBP8.52□□□□□ -1.05
CCDC33-209ENST00000560565 ZNF555Q8NEP9 628 aa8.52□□□□□ -1.05
CCDC33-209ENST00000560565 OR13F1Q8NGS4 319 aa8.52□□□□□ -1.05
CCDC33-209ENST00000560565 GIPC2Q8TF65 315 aa8.52□□□□□ -1.05
CCDC33-209ENST00000560565 RNF139Q8WU17 664 aa8.52□□□□□ -1.05
CCDC33-209ENST00000560565 HDAC11Q96DB2 347 aa8.52□□□□□ -1.05
CCDC33-209ENST00000560565 AURKBQ96GD4 344 aaPredicted RBP8.52□□□□□ -1.05
CCDC33-209ENST00000560565 SMARCD1Q96GM5 515 aa8.52□□□□□ -1.05
CCDC33-209ENST00000560565 MYRFLQ96LU7 910 aa8.52□□□□□ -1.05
CCDC33-209ENST00000560565 KCTD15Q96SI1 283 aaPredicted RBP8.52□□□□□ -1.05
CCDC33-209ENST00000560565 CIB1Q99828 191 aa8.52□□□□□ -1.05
CCDC33-209ENST00000560565 WDR55Q9H6Y2 383 aaPredicted RBP8.52□□□□□ -1.05
CCDC33-209ENST00000560565 RMND5AQ9H871 391 aa8.52□□□□□ -1.05
CCDC33-209ENST00000560565 NOL11Q9H8H0 719 aaKnown RBP8.52□□□□□ -1.05
CCDC33-209ENST00000560565 CPNE5Q9HCH3 593 aa8.52□□□□□ -1.05
CCDC33-209ENST00000560565 TRPV5Q9NQA5 729 aa8.52□□□□□ -1.05
CCDC33-209ENST00000560565 GTSE1Q9NYZ3 720 aa8.52□□□□□ -1.05
CCDC33-209ENST00000560565 FNIP2Q9P278 1114 aa8.52□□□□□ -1.05
CCDC33-209ENST00000560565 MAGEL2Q9UJ55 1249 aa8.52□□□□□ -1.05
CCDC33-209ENST00000560565 ANAPC2Q9UJX6 822 aa8.52□□□□□ -1.05
CCDC33-209ENST00000560565 PRG3Q9Y2Y8 225 aaPredicted RBP8.52□□□□□ -1.05
CCDC33-209ENST00000560565 ORC6Q9Y5N6 252 aa8.52□□□□□ -1.05
CCDC33-209ENST00000560565 OBSL1O75147 1896 aa8.51□□□□□ -1.05
CCDC33-209ENST00000560565 NUP205Q92621 2012 aa8.51□□□□□ -1.05
CCDC33-209ENST00000560565 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.51□□□□□ -1.05
CCDC33-209ENST00000560565 E7ENX8 843 aa8.51□□□□□ -1.05
CCDC33-209ENST00000560565 H7C4K7 107 aa8.51□□□□□ -1.05
CCDC33-209ENST00000560565 ABCB7O75027 752 aa8.51□□□□□ -1.05
CCDC33-209ENST00000560565 SEC14L2O76054 403 aa8.51□□□□□ -1.05
CCDC33-209ENST00000560565 CHEK2O96017 543 aa8.51□□□□□ -1.05
CCDC33-209ENST00000560565 LTA4HP09960 611 aaKnown RBP8.51□□□□□ -1.05
CCDC33-209ENST00000560565 CTSAP10619 480 aa8.51□□□□□ -1.05
CCDC33-209ENST00000560565 PTPN2P17706 415 aa8.51□□□□□ -1.05
CCDC33-209ENST00000560565 VARSP26640 1264 aaKnown RBP8.51□□□□□ -1.05
CCDC33-209ENST00000560565 HOXD12P35452 270 aa8.51□□□□□ -1.05
CCDC33-209ENST00000560565 GRIA3P42263 894 aa8.51□□□□□ -1.05
CCDC33-209ENST00000560565 NEK2P51955 445 aa8.51□□□□□ -1.05
CCDC33-209ENST00000560565 GEMP55040 296 aa8.51□□□□□ -1.05
CCDC33-209ENST00000560565 TPD52P55327 224 aaPredicted RBP8.51□□□□□ -1.05
CCDC33-209ENST00000560565 RPS3AP61247 264 aaKnown RBP8.51□□□□□ -1.05
CCDC33-209ENST00000560565 ORC1Q13415 861 aa8.51□□□□□ -1.05
CCDC33-209ENST00000560565 RAB39AQ14964 217 aa8.51□□□□□ -1.05
CCDC33-209ENST00000560565 RPS6KA2Q15349 733 aa8.51□□□□□ -1.05
CCDC33-209ENST00000560565 TGFBIQ15582 683 aa8.51□□□□□ -1.05
CCDC33-209ENST00000560565 BCL2A1Q16548 175 aa8.51□□□□□ -1.05
CCDC33-209ENST00000560565 DGUOKQ16854 277 aa8.51□□□□□ -1.05
CCDC33-209ENST00000560565 PPM1LQ5SGD2 360 aa8.51□□□□□ -1.05
CCDC33-209ENST00000560565 TIGD7Q6NT04 549 aaPredicted RBP8.51□□□□□ -1.05
CCDC33-209ENST00000560565 PKN3Q6P5Z2 889 aa8.51□□□□□ -1.05
CCDC33-209ENST00000560565 KCTD8Q6ZWB6 473 aa8.51□□□□□ -1.05
CCDC33-209ENST00000560565 LYSMD3Q7Z3D4 306 aa8.51□□□□□ -1.05
CCDC33-209ENST00000560565 CMC1Q7Z7K0 106 aa8.51□□□□□ -1.05
CCDC33-209ENST00000560565 GALNT13Q8IUC8 556 aa8.51□□□□□ -1.05
CCDC33-209ENST00000560565 GPR65Q8IYL9 337 aa8.51□□□□□ -1.05
CCDC33-209ENST00000560565 CLYBLQ8N0X4 340 aa8.51□□□□□ -1.05
CCDC33-209ENST00000560565 ZNF567Q8N184 647 aa8.51□□□□□ -1.05
CCDC33-209ENST00000560565 SVOPLQ8N434 492 aa8.51□□□□□ -1.05
CCDC33-209ENST00000560565 FSTL5Q8N475 847 aaPredicted RBP8.51□□□□□ -1.05
CCDC33-209ENST00000560565 CBR4Q8N4T8 237 aa8.51□□□□□ -1.05
CCDC33-209ENST00000560565 TMCO5AQ8N6Q1 288 aa8.51□□□□□ -1.05
CCDC33-209ENST00000560565 CCNYL1Q8N7R7 359 aa8.51□□□□□ -1.05
CCDC33-209ENST00000560565 UBA3Q8TBC4 463 aa8.51□□□□□ -1.05
CCDC33-209ENST00000560565 SPPL2BQ8TCT7 592 aa8.51□□□□□ -1.05
CCDC33-209ENST00000560565 MAPK15Q8TD08 544 aa8.51□□□□□ -1.05
CCDC33-209ENST00000560565 SLC2A14Q8TDB8 520 aa8.51□□□□□ -1.05
CCDC33-209ENST00000560565 C2orf15Q8WU43 125 aaKnown RBP8.51□□□□□ -1.05
CCDC33-209ENST00000560565 BCL7CQ8WUZ0 217 aaPredicted RBP8.51□□□□□ -1.05
CCDC33-209ENST00000560565 CYGBQ8WWM9 190 aa8.51□□□□□ -1.05
CCDC33-209ENST00000560565 AUTS2Q8WXX7 1259 aa8.51□□□□□ -1.05
CCDC33-209ENST00000560565 HDAC2Q92769 488 aaKnown RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms