RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 HAUS1Q96CS2 278 aa13.95□□□□□ -0.18
TPM1-223ENST00000560445 TEKT5Q96M29 485 aa13.95□□□□□ -0.18
TPM1-223ENST00000560445 TEFMQ96QE5 360 aaKnown RBP13.95□□□□□ -0.18
TPM1-223ENST00000560445 TRIB3Q96RU7 358 aa13.95□□□□□ -0.18
TPM1-223ENST00000560445 TRIM39Q9HCM9 518 aa13.95□□□□□ -0.18
TPM1-223ENST00000560445 WDR70Q9NW82 654 aa13.95□□□□□ -0.18
TPM1-223ENST00000560445 KLHL8Q9P2G9 620 aaPredicted RBP13.95□□□□□ -0.18
TPM1-223ENST00000560445 FAM153AQ9UHL3 310 aa13.95□□□□□ -0.18
TPM1-223ENST00000560445 ALG6Q9Y672 507 aa13.95□□□□□ -0.18
TPM1-223ENST00000560445 AHCTF1Q8WYP5 2266 aa13.95□□□□□ -0.18
TPM1-223ENST00000560445 STMND1H3BQB6 276 aa13.94□□□□□ -0.18
TPM1-223ENST00000560445 KMOO15229 486 aa13.94□□□□□ -0.18
TPM1-223ENST00000560445 NUAK1O60285 661 aa13.94□□□□□ -0.18
TPM1-223ENST00000560445 KCNJ13O60928 360 aa13.94□□□□□ -0.18
TPM1-223ENST00000560445 DNAJC6O75061 913 aa13.94□□□□□ -0.18
TPM1-223ENST00000560445 LCA5LO95447 670 aa13.94□□□□□ -0.18
TPM1-223ENST00000560445 F3P13726 295 aa13.94□□□□□ -0.18
TPM1-223ENST00000560445 CD1CP29017 333 aa13.94□□□□□ -0.18
TPM1-223ENST00000560445 MAPK10P53779 464 aa13.94□□□□□ -0.18
TPM1-223ENST00000560445 HHEXQ03014 270 aa13.94□□□□□ -0.18
TPM1-223ENST00000560445 XRCC4Q13426 336 aa13.94□□□□□ -0.18
TPM1-223ENST00000560445 PPP2R5EQ16537 467 aa13.94□□□□□ -0.18
TPM1-223ENST00000560445 PCSK7Q16549 785 aa13.94□□□□□ -0.18
TPM1-223ENST00000560445 TAZQ16635 292 aa13.94□□□□□ -0.18
TPM1-223ENST00000560445 MANEAQ5SRI9 462 aa13.94□□□□□ -0.18
TPM1-223ENST00000560445 ITPRIPL1Q6GPH6 555 aa13.94□□□□□ -0.18
TPM1-223ENST00000560445 TMEM71Q6P5X7 295 aa13.94□□□□□ -0.18
TPM1-223ENST00000560445 WDR74Q6RFH5 385 aaPredicted RBP13.94□□□□□ -0.18
TPM1-223ENST00000560445 MFSD7Q6UXD7 560 aa13.94□□□□□ -0.18
TPM1-223ENST00000560445 NYAP1Q6ZVC0 841 aa13.94□□□□□ -0.18
TPM1-223ENST00000560445 DAAM2Q86T65 1068 aa13.94□□□□□ -0.18
TPM1-223ENST00000560445 TRIM74Q86UV6 250 aa13.94□□□□□ -0.18
TPM1-223ENST00000560445 TRIM48Q8IWZ4 208 aa13.94□□□□□ -0.18
TPM1-223ENST00000560445 DTX3LQ8TDB6 740 aa13.94□□□□□ -0.18
TPM1-223ENST00000560445 BRSK1Q8TDC3 778 aa13.94□□□□□ -0.18
TPM1-223ENST00000560445 SLC37A2Q8TED4 501 aa13.94□□□□□ -0.18
TPM1-223ENST00000560445 GLYATL1Q969I3 302 aa13.94□□□□□ -0.18
TPM1-223ENST00000560445 CCDC74BQ96LY2 380 aa13.94□□□□□ -0.18
TPM1-223ENST00000560445 TTC25Q96NG3 672 aa13.94□□□□□ -0.18
TPM1-223ENST00000560445 PANX2Q96RD6 677 aa13.94□□□□□ -0.18
TPM1-223ENST00000560445 TAAR9Q96RI9 348 aa13.94□□□□□ -0.18
TPM1-223ENST00000560445 DDA1Q9BW61 102 aa13.94□□□□□ -0.18
TPM1-223ENST00000560445 FSD1LQ9BXM9 530 aa13.94□□□□□ -0.18
TPM1-223ENST00000560445 RDH14Q9HBH5 336 aa13.94□□□□□ -0.18
TPM1-223ENST00000560445 CPNE5Q9HCH3 593 aa13.94□□□□□ -0.18
TPM1-223ENST00000560445 BAHCC1Q9P281 2608 aa13.94□□□□□ -0.18
TPM1-223ENST00000560445 PCDHGA3Q9Y5H0 932 aa13.94□□□□□ -0.18
TPM1-223ENST00000560445 IGHV1OR21-1A0A087WYE8 117 aa13.93□□□□□ -0.18
TPM1-223ENST00000560445 IGHV5-10-1A0A0J9YXX1 117 aa13.93□□□□□ -0.18
TPM1-223ENST00000560445 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.93□□□□□ -0.18
TPM1-223ENST00000560445 B4GAT1O43505 415 aa13.93□□□□□ -0.18
TPM1-223ENST00000560445 PMPCBO75439 489 aa13.93□□□□□ -0.18
TPM1-223ENST00000560445 ANXA9O76027 345 aa13.93□□□□□ -0.18
TPM1-223ENST00000560445 SLC4A1P02730 911 aa13.93□□□□□ -0.18
TPM1-223ENST00000560445 FUCA1P04066 466 aa13.93□□□□□ -0.18
TPM1-223ENST00000560445 ATP1A1P05023 1023 aaKnown RBP13.93□□□□□ -0.18
TPM1-223ENST00000560445 SFTPCP11686 197 aa13.93□□□□□ -0.18
TPM1-223ENST00000560445 ACP5P13686 325 aa13.93□□□□□ -0.18
TPM1-223ENST00000560445 HOXB3P14651 431 aaPredicted RBP13.93□□□□□ -0.18
TPM1-223ENST00000560445 HLA-DPA1P20036 260 aa13.93□□□□□ -0.18
TPM1-223ENST00000560445 PTPN3P26045 913 aa13.93□□□□□ -0.18
TPM1-223ENST00000560445 MPP3Q13368 585 aa13.93□□□□□ -0.18
TPM1-223ENST00000560445 PTPRRQ15256 657 aa13.93□□□□□ -0.18
TPM1-223ENST00000560445 INSCQ1MX18 579 aa13.93□□□□□ -0.18
TPM1-223ENST00000560445 ALS2CLQ60I27 953 aa13.93□□□□□ -0.18
TPM1-223ENST00000560445 KAZNQ674X7 775 aa13.93□□□□□ -0.18
TPM1-223ENST00000560445 CYB5D1Q6P9G0 228 aa13.93□□□□□ -0.18
TPM1-223ENST00000560445 RFLNAQ6ZTI6 216 aa13.93□□□□□ -0.18
TPM1-223ENST00000560445 USP53Q70EK8 1073 aa13.93□□□□□ -0.18
TPM1-223ENST00000560445 TMC3Q7Z5M5 1100 aa13.93□□□□□ -0.18
TPM1-223ENST00000560445 LRRTM4Q86VH4 590 aa13.93□□□□□ -0.18
TPM1-223ENST00000560445 PLXDC1Q8IUK5 500 aa13.93□□□□□ -0.18
TPM1-223ENST00000560445 TMTC1Q8IUR5 882 aa13.93□□□□□ -0.18
TPM1-223ENST00000560445 RBM12BQ8IXT5 1001 aaKnown RBP13.93□□□□□ -0.18
TPM1-223ENST00000560445 TADA1Q96BN2 335 aa13.93□□□□□ -0.18
TPM1-223ENST00000560445 VPS35Q96QK1 796 aa13.93□□□□□ -0.18
TPM1-223ENST00000560445 AGAP2Q99490 1192 aa13.93□□□□□ -0.18
TPM1-223ENST00000560445 NUDT22Q9BRQ3 303 aa13.93□□□□□ -0.18
TPM1-223ENST00000560445 ZPBPQ9BS86 351 aa13.93□□□□□ -0.18
TPM1-223ENST00000560445 TIMM29Q9BSF4 260 aa13.93□□□□□ -0.18
TPM1-223ENST00000560445 SEMA6CQ9H3T2 930 aa13.93□□□□□ -0.18
TPM1-223ENST00000560445 UCK1Q9HA47 277 aa13.93□□□□□ -0.18
TPM1-223ENST00000560445 EFR3BQ9Y2G0 817 aa13.93□□□□□ -0.18
TPM1-223ENST00000560445 PKP3Q9Y446 797 aa13.93□□□□□ -0.18
TPM1-223ENST00000560445 PCDHA13Q9Y5I0 950 aa13.93□□□□□ -0.18
TPM1-223ENST00000560445 SCN8AQ9UQD0 1980 aa13.92□□□□□ -0.18
TPM1-223ENST00000560445 PRAMEF33A0A0G2JMD5 474 aa13.92□□□□□ -0.18
TPM1-223ENST00000560445 CCDC66A2RUB6 948 aa13.92□□□□□ -0.18
TPM1-223ENST00000560445 KLHL33A6NCF5 533 aa13.92□□□□□ -0.18
TPM1-223ENST00000560445 LILRA5A6NI73 299 aa13.92□□□□□ -0.18
TPM1-223ENST00000560445 FADS2P1A8MWK0 482 aa13.92□□□□□ -0.18
TPM1-223ENST00000560445 B4E171 279 aa13.92□□□□□ -0.18
TPM1-223ENST00000560445 APOC4-APOC2K7ER74 178 aa13.92□□□□□ -0.18
TPM1-223ENST00000560445 PRAMEF10O60809 474 aa13.92□□□□□ -0.18
TPM1-223ENST00000560445 APOC2P02655 101 aa13.92□□□□□ -0.18
TPM1-223ENST00000560445 ITGB2P05107 769 aa13.92□□□□□ -0.18
TPM1-223ENST00000560445 THRAP10827 490 aa13.92□□□□□ -0.18
TPM1-223ENST00000560445 HGFP14210 728 aa13.92□□□□□ -0.18
TPM1-223ENST00000560445 CTNNA2P26232 953 aa13.92□□□□□ -0.18
TPM1-223ENST00000560445 HMGCLP35914 325 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms