RNA–Protein interactions for RNA: ENST00000560435.1

SPG11-222, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 413 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-222ENST00000560435 MBTD1Q05BQ5 628 aa2.34□□□□□ -2.03
SPG11-222ENST00000560435 DECR1Q16698 335 aa2.34□□□□□ -2.03
SPG11-222ENST00000560435 ZNF667Q5HYK9 610 aa2.34□□□□□ -2.03
SPG11-222ENST00000560435 CPLX2Q6PUV4 134 aaKnown RBP2.34□□□□□ -2.03
SPG11-222ENST00000560435 PAQR6Q6TCH4 344 aa2.34□□□□□ -2.03
SPG11-222ENST00000560435 NRROSQ86YC3 692 aa2.34□□□□□ -2.03
SPG11-222ENST00000560435 DHX40Q8IX18 779 aaKnown RBP2.34□□□□□ -2.03
SPG11-222ENST00000560435 ABCA7Q8IZY2 2146 aa2.34□□□□□ -2.03
SPG11-222ENST00000560435 TMEM57Q8N5G2 664 aa2.34□□□□□ -2.03
SPG11-222ENST00000560435 PHF21AQ96BD5 680 aa2.34□□□□□ -2.03
SPG11-222ENST00000560435 CYYR1Q96J86 154 aa2.34□□□□□ -2.03
SPG11-222ENST00000560435 IL1RAPL1Q9NZN1 696 aa2.34□□□□□ -2.03
SPG11-222ENST00000560435 MOB4Q9Y3A3 225 aa2.34□□□□□ -2.03
SPG11-222ENST00000560435 ZNF646O15015 1829 aaPredicted RBP2.33□□□□□ -2.04
SPG11-222ENST00000560435 A0A087WW49 117 aa2.33□□□□□ -2.04
SPG11-222ENST00000560435 H0YIN7 160 aa2.33□□□□□ -2.04
SPG11-222ENST00000560435 IPO5O00410 1097 aaKnown RBP2.33□□□□□ -2.04
SPG11-222ENST00000560435 HMBSP08397 361 aa2.33□□□□□ -2.04
SPG11-222ENST00000560435 LIFP15018 202 aa2.33□□□□□ -2.04
SPG11-222ENST00000560435 CEBPBP17676 345 aa2.33□□□□□ -2.04
SPG11-222ENST00000560435 ADD2P35612 726 aa2.33□□□□□ -2.04
SPG11-222ENST00000560435 WNT5AP41221 380 aa2.33□□□□□ -2.04
SPG11-222ENST00000560435 CLDN20P56880 219 aa2.33□□□□□ -2.04
SPG11-222ENST00000560435 ACTR2P61160 394 aa2.33□□□□□ -2.04
SPG11-222ENST00000560435 TRA2BP62995 288 aaKnown RBP2.33□□□□□ -2.04
SPG11-222ENST00000560435 NAE1Q13564 534 aa2.33□□□□□ -2.04
SPG11-222ENST00000560435 TIGD6Q17RP2 521 aa2.33□□□□□ -2.04
SPG11-222ENST00000560435 MYLK3Q32MK0 819 aa2.33□□□□□ -2.04
SPG11-222ENST00000560435 GTDC1Q4AE62 458 aa2.33□□□□□ -2.04
SPG11-222ENST00000560435 ADGRA1Q86SQ6 560 aa2.33□□□□□ -2.04
SPG11-222ENST00000560435 LONP2Q86WA8 852 aa2.33□□□□□ -2.04
SPG11-222ENST00000560435 OR2L2Q8NH16 312 aa2.33□□□□□ -2.04
SPG11-222ENST00000560435 RUBCNQ92622 972 aa2.33□□□□□ -2.04
SPG11-222ENST00000560435 SLC41A2Q96JW4 573 aa2.33□□□□□ -2.04
SPG11-222ENST00000560435 LRMDAQ9H2I8 198 aa2.33□□□□□ -2.04
SPG11-222ENST00000560435 SEBOXQ9HB31 216 aaPredicted RBP2.33□□□□□ -2.04
SPG11-222ENST00000560435 METTL14Q9HCE5 456 aaKnown RBP2.33□□□□□ -2.04
SPG11-222ENST00000560435 RASSF1Q9NS23 344 aa2.33□□□□□ -2.04
SPG11-222ENST00000560435 FBXL2Q9UKC9 423 aa2.33□□□□□ -2.04
SPG11-222ENST00000560435 MAN1B1Q9UKM7 699 aa2.33□□□□□ -2.04
SPG11-222ENST00000560435 IGKV6D-21A0A0A0MT36 114 aa2.32□□□□□ -2.04
SPG11-222ENST00000560435 A0A0G2JNG1 304 aa2.32□□□□□ -2.04
SPG11-222ENST00000560435 C1orf226A1L170 272 aa2.32□□□□□ -2.04
SPG11-222ENST00000560435 TFP02787 698 aa2.32□□□□□ -2.04
SPG11-222ENST00000560435 CBLP22681 906 aa2.32□□□□□ -2.04
SPG11-222ENST00000560435 COG7P83436 770 aa2.32□□□□□ -2.04
SPG11-222ENST00000560435 SORDQ00796 357 aa2.32□□□□□ -2.04
SPG11-222ENST00000560435 RAPSNQ13702 412 aa2.32□□□□□ -2.04
SPG11-222ENST00000560435 KIR2DS5Q14953 304 aa2.32□□□□□ -2.04
SPG11-222ENST00000560435 SYCP2LQ5T4T6 812 aa2.32□□□□□ -2.04
SPG11-222ENST00000560435 ALS2CLQ60I27 953 aa2.32□□□□□ -2.04
SPG11-222ENST00000560435 C18orf63Q68DL7 685 aa2.32□□□□□ -2.04
SPG11-222ENST00000560435 PLXDC2Q6UX71 529 aa2.32□□□□□ -2.04
SPG11-222ENST00000560435 Q8N377 158 aa2.32□□□□□ -2.04
SPG11-222ENST00000560435 C11orf65Q8NCR3 313 aa2.32□□□□□ -2.04
SPG11-222ENST00000560435 RDM1Q8NG50 284 aa2.32□□□□□ -2.04
SPG11-222ENST00000560435 OMA1Q96E52 524 aa2.32□□□□□ -2.04
SPG11-222ENST00000560435 EYA3Q99504 573 aa2.32□□□□□ -2.04
SPG11-222ENST00000560435 SYT15Q9BQS2 421 aa2.32□□□□□ -2.04
SPG11-222ENST00000560435 GPATCH1Q9BRR8 931 aaKnown RBP2.32□□□□□ -2.04
SPG11-222ENST00000560435 IFIH1Q9BYX4 1025 aaKnown RBP2.32□□□□□ -2.04
SPG11-222ENST00000560435 LAT2Q9GZY6 243 aa2.32□□□□□ -2.04
SPG11-222ENST00000560435 VEZTQ9HBM0 779 aa2.32□□□□□ -2.04
SPG11-222ENST00000560435 RRP7AQ9Y3A4 280 aaKnown RBP2.32□□□□□ -2.04
SPG11-222ENST00000560435 ASTN2O75129 1339 aaPredicted RBP2.32□□□□□ -2.04
SPG11-222ENST00000560435 FLT1P17948 1338 aa2.32□□□□□ -2.04
SPG11-222ENST00000560435 TAF4O00268 1085 aa2.31□□□□□ -2.04
SPG11-222ENST00000560435 PGFP49763 221 aa2.31□□□□□ -2.04
SPG11-222ENST00000560435 BLMHQ13867 455 aa2.31□□□□□ -2.04
SPG11-222ENST00000560435 DCST1Q5T197 706 aa2.31□□□□□ -2.04
SPG11-222ENST00000560435 TXNDC8Q6A555 127 aa2.31□□□□□ -2.04
SPG11-222ENST00000560435 HIST2H2BDQ6DRA6 164 aa2.31□□□□□ -2.04
SPG11-222ENST00000560435 JMJD6Q6NYC1 403 aaPredicted RBP2.31□□□□□ -2.04
SPG11-222ENST00000560435 PQLC2Q6ZP29 291 aa2.31□□□□□ -2.04
SPG11-222ENST00000560435 TDRPQ86YL5 185 aa2.31□□□□□ -2.04
SPG11-222ENST00000560435 SLC39A11Q8N1S5 342 aa2.31□□□□□ -2.04
SPG11-222ENST00000560435 ZPLD1Q8TCW7 415 aa2.31□□□□□ -2.04
SPG11-222ENST00000560435 SLC44A1Q8WWI5 657 aa2.31□□□□□ -2.04
SPG11-222ENST00000560435 PRAC1Q96KF2 57 aa2.31□□□□□ -2.04
SPG11-222ENST00000560435 ELAC2Q9BQ52 826 aaKnown RBP2.31□□□□□ -2.04
SPG11-222ENST00000560435 RTP3Q9BQQ7 232 aa2.31□□□□□ -2.04
SPG11-222ENST00000560435 TKTL2Q9H0I9 626 aa2.31□□□□□ -2.04
SPG11-222ENST00000560435 TAOK3Q9H2K8 898 aa2.31□□□□□ -2.04
SPG11-222ENST00000560435 GRHPRQ9UBQ7 328 aa2.31□□□□□ -2.04
SPG11-222ENST00000560435 RARRES3Q9UL19 164 aa2.31□□□□□ -2.04
SPG11-222ENST00000560435 GIMAP1-GIMAP5A0A087WTJ2 511 aa2.3□□□□□ -2.04
SPG11-222ENST00000560435 A0A1W2PP11 408 aa2.3□□□□□ -2.04
SPG11-222ENST00000560435 ANKRD66B4E2M5 251 aa2.3□□□□□ -2.04
SPG11-222ENST00000560435 PLOD2O00469 737 aa2.3□□□□□ -2.04
SPG11-222ENST00000560435 HS3ST1O14792 307 aa2.3□□□□□ -2.04
SPG11-222ENST00000560435 BUD23O43709 281 aaKnown RBP2.3□□□□□ -2.04
SPG11-222ENST00000560435 AP2A2O94973 939 aa2.3□□□□□ -2.04
SPG11-222ENST00000560435 GALTP07902 379 aa2.3□□□□□ -2.04
SPG11-222ENST00000560435 CAPN2P17655 700 aa2.3□□□□□ -2.04
SPG11-222ENST00000560435 NR2F2P24468 414 aa2.3□□□□□ -2.04
SPG11-222ENST00000560435 UBA7P41226 1012 aa2.3□□□□□ -2.04
SPG11-222ENST00000560435 DLK1P80370 383 aa2.3□□□□□ -2.04
SPG11-222ENST00000560435 COX10Q12887 443 aa2.3□□□□□ -2.04
SPG11-222ENST00000560435 GRAPQ13588 217 aa2.3□□□□□ -2.04
SPG11-222ENST00000560435 PPP2R5BQ15173 497 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms