RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 PIEZO2Q9H5I5 2752 aa13.5□□□□□ -0.25
SMAD3-214ENST00000560402 SDK2Q58EX2 2172 aa13.49□□□□□ -0.25
SMAD3-214ENST00000560402 FLNBO75369 2602 aaKnown RBP13.49□□□□□ -0.25
SMAD3-214ENST00000560402 TTC24A2A3L6 582 aaPredicted RBP13.49□□□□□ -0.25
SMAD3-214ENST00000560402 STMND1H3BQB6 276 aa13.49□□□□□ -0.25
SMAD3-214ENST00000560402 DDX3YO15523 660 aaKnown RBP13.49□□□□□ -0.25
SMAD3-214ENST00000560402 EFSO43281 561 aa13.49□□□□□ -0.25
SMAD3-214ENST00000560402 FZD6O60353 706 aa13.49□□□□□ -0.25
SMAD3-214ENST00000560402 ECEL1O95672 775 aa13.49□□□□□ -0.25
SMAD3-214ENST00000560402 TCF4P15884 667 aa13.49□□□□□ -0.25
SMAD3-214ENST00000560402 ADCY8P40145 1251 aa13.49□□□□□ -0.25
SMAD3-214ENST00000560402 ETV5P41161 510 aa13.49□□□□□ -0.25
SMAD3-214ENST00000560402 MAPK10P53779 464 aa13.49□□□□□ -0.25
SMAD3-214ENST00000560402 GPLD1P80108 840 aa13.49□□□□□ -0.25
SMAD3-214ENST00000560402 CTBSQ01459 385 aa13.49□□□□□ -0.25
SMAD3-214ENST00000560402 C16orf72Q14CZ0 275 aa13.49□□□□□ -0.25
SMAD3-214ENST00000560402 ODF2Q5BJF6 829 aa13.49□□□□□ -0.25
SMAD3-214ENST00000560402 LRRC66Q68CR7 880 aa13.49□□□□□ -0.25
SMAD3-214ENST00000560402 SLC30A9Q6PML9 568 aa13.49□□□□□ -0.25
SMAD3-214ENST00000560402 TMPRSS9Q7Z410 1059 aa13.49□□□□□ -0.25
SMAD3-214ENST00000560402 TSPAN33Q86UF1 283 aa13.49□□□□□ -0.25
SMAD3-214ENST00000560402 DTX1Q86Y01 620 aa13.49□□□□□ -0.25
SMAD3-214ENST00000560402 SFTPA2Q8IWL1 248 aa13.49□□□□□ -0.25
SMAD3-214ENST00000560402 NAGSQ8N159 534 aa13.49□□□□□ -0.25
SMAD3-214ENST00000560402 FAM71BQ8TC56 605 aa13.49□□□□□ -0.25
SMAD3-214ENST00000560402 PIH1D2Q8WWB5 315 aa13.49□□□□□ -0.25
SMAD3-214ENST00000560402 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.49□□□□□ -0.25
SMAD3-214ENST00000560402 MAML1Q92585 1016 aa13.49□□□□□ -0.25
SMAD3-214ENST00000560402 USP7Q93009 1102 aa13.49□□□□□ -0.25
SMAD3-214ENST00000560402 MS4A14Q96JA4 679 aa13.49□□□□□ -0.25
SMAD3-214ENST00000560402 SEMA3CQ99985 751 aa13.49□□□□□ -0.25
SMAD3-214ENST00000560402 ZNF670Q9BS34 389 aa13.49□□□□□ -0.25
SMAD3-214ENST00000560402 SEMA6CQ9H3T2 930 aa13.49□□□□□ -0.25
SMAD3-214ENST00000560402 GOLPH3Q9H4A6 298 aa13.49□□□□□ -0.25
SMAD3-214ENST00000560402 SUDS3Q9H7L9 328 aaPredicted RBP13.49□□□□□ -0.25
SMAD3-214ENST00000560402 NT5MQ9NPB1 228 aa13.49□□□□□ -0.25
SMAD3-214ENST00000560402 PCDHGA3Q9Y5H0 932 aa13.49□□□□□ -0.25
SMAD3-214ENST00000560402 A0A0J9YYE9 177 aa13.48□□□□□ -0.25
SMAD3-214ENST00000560402 C9orf172C9J069 976 aa13.48□□□□□ -0.25
SMAD3-214ENST00000560402 B4GAT1O43505 415 aa13.48□□□□□ -0.25
SMAD3-214ENST00000560402 PSTPIP1O43586 416 aa13.48□□□□□ -0.25
SMAD3-214ENST00000560402 MFSD11O43934 449 aa13.48□□□□□ -0.25
SMAD3-214ENST00000560402 PROSCO94903 275 aa13.48□□□□□ -0.25
SMAD3-214ENST00000560402 SOD1P00441 154 aa13.48□□□□□ -0.25
SMAD3-214ENST00000560402 TRBC1P01850 177 aa13.48□□□□□ -0.25
SMAD3-214ENST00000560402 SFTPCP11686 197 aa13.48□□□□□ -0.25
SMAD3-214ENST00000560402 AK4P27144 223 aaPredicted RBP13.48□□□□□ -0.25
SMAD3-214ENST00000560402 TNFRSF8P28908 595 aa13.48□□□□□ -0.25
SMAD3-214ENST00000560402 ALDH4A1P30038 563 aa13.48□□□□□ -0.25
SMAD3-214ENST00000560402 GARSP41250 739 aaKnown RBP13.48□□□□□ -0.25
SMAD3-214ENST00000560402 ACTR1BP42025 376 aa13.48□□□□□ -0.25
SMAD3-214ENST00000560402 FASLGP48023 281 aa13.48□□□□□ -0.25
SMAD3-214ENST00000560402 ATP1A2P50993 1020 aa13.48□□□□□ -0.25
SMAD3-214ENST00000560402 LIMK2P53671 638 aa13.48□□□□□ -0.25
SMAD3-214ENST00000560402 EPHB1P54762 984 aa13.48□□□□□ -0.25
SMAD3-214ENST00000560402 OR1D5P58170 312 aa13.48□□□□□ -0.25
SMAD3-214ENST00000560402 ACTR1AP61163 376 aa13.48□□□□□ -0.25
SMAD3-214ENST00000560402 RPL26P61254 145 aaKnown RBP13.48□□□□□ -0.25
SMAD3-214ENST00000560402 VSNL1P62760 191 aa13.48□□□□□ -0.25
SMAD3-214ENST00000560402 GALNT2Q10471 571 aa13.48□□□□□ -0.25
SMAD3-214ENST00000560402 SQSTM1Q13501 440 aa13.48□□□□□ -0.25
SMAD3-214ENST00000560402 PAFAH1B3Q15102 231 aaKnown RBP13.48□□□□□ -0.25
SMAD3-214ENST00000560402 TGIF1Q15583 401 aa13.48□□□□□ -0.25
SMAD3-214ENST00000560402 AMZ1Q400G9 498 aa13.48□□□□□ -0.25
SMAD3-214ENST00000560402 TXNRD3NBQ6F5E7 133 aa13.48□□□□□ -0.25
SMAD3-214ENST00000560402 GALNT13Q8IUC8 556 aa13.48□□□□□ -0.25
SMAD3-214ENST00000560402 NRSN1Q8IZ57 195 aa13.48□□□□□ -0.25
SMAD3-214ENST00000560402 OR4D9Q8NGE8 314 aa13.48□□□□□ -0.25
SMAD3-214ENST00000560402 AP2M1Q96CW1 435 aa13.48□□□□□ -0.25
SMAD3-214ENST00000560402 CCDC74BQ96LY2 380 aa13.48□□□□□ -0.25
SMAD3-214ENST00000560402 KRT12Q99456 494 aa13.48□□□□□ -0.25
SMAD3-214ENST00000560402 NUDT22Q9BRQ3 303 aa13.48□□□□□ -0.25
SMAD3-214ENST00000560402 ARHGAP9Q9BRR9 750 aa13.48□□□□□ -0.25
SMAD3-214ENST00000560402 STN1Q9H668 368 aaKnown RBP13.48□□□□□ -0.25
SMAD3-214ENST00000560402 RDH14Q9HBH5 336 aa13.48□□□□□ -0.25
SMAD3-214ENST00000560402 OGFRQ9NZT2 677 aa13.48□□□□□ -0.25
SMAD3-214ENST00000560402 FOXJ2Q9P0K8 574 aa13.48□□□□□ -0.25
SMAD3-214ENST00000560402 RPL26L1Q9UNX3 145 aaKnown RBP13.48□□□□□ -0.25
SMAD3-214ENST00000560402 PCDHGA4Q9Y5G9 962 aa13.48□□□□□ -0.25
SMAD3-214ENST00000560402 PCDHA3Q9Y5H8 950 aa13.48□□□□□ -0.25
SMAD3-214ENST00000560402 IGHV5-10-1A0A0J9YXX1 117 aa13.47□□□□□ -0.25
SMAD3-214ENST00000560402 MATN3O15232 486 aa13.47□□□□□ -0.25
SMAD3-214ENST00000560402 FGGP02679 453 aa13.47□□□□□ -0.25
SMAD3-214ENST00000560402 FUCA1P04066 466 aa13.47□□□□□ -0.25
SMAD3-214ENST00000560402 CTPS1P17812 591 aa13.47□□□□□ -0.25
SMAD3-214ENST00000560402 TNNT3P45378 269 aaPredicted RBP13.47□□□□□ -0.25
SMAD3-214ENST00000560402 STC1P52823 247 aa13.47□□□□□ -0.25
SMAD3-214ENST00000560402 RAB15P59190 212 aa13.47□□□□□ -0.25
SMAD3-214ENST00000560402 ITKQ08881 620 aa13.47□□□□□ -0.25
SMAD3-214ENST00000560402 PDK2Q15119 407 aa13.47□□□□□ -0.25
SMAD3-214ENST00000560402 NCBP2-AS2Q69YL0 99 aa13.47□□□□□ -0.25
SMAD3-214ENST00000560402 DOK6Q6PKX4 331 aa13.47□□□□□ -0.25
SMAD3-214ENST00000560402 ZFAND4Q86XD8 727 aa13.47□□□□□ -0.25
SMAD3-214ENST00000560402 MAP7D3Q8IWC1 876 aa13.47□□□□□ -0.25
SMAD3-214ENST00000560402 RHOT1Q8IXI2 618 aa13.47□□□□□ -0.25
SMAD3-214ENST00000560402 EIF1ADQ8N9N8 165 aaKnown RBP13.47□□□□□ -0.25
SMAD3-214ENST00000560402 AGBL5Q8NDL9 886 aa13.47□□□□□ -0.25
SMAD3-214ENST00000560402 EXD1Q8NHP7 514 aa13.47□□□□□ -0.25
SMAD3-214ENST00000560402 COX14Q96I36 57 aa13.47□□□□□ -0.25
SMAD3-214ENST00000560402 TSGA13Q96PP4 275 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms