RNA–Protein interactions for RNA: ENST00000560369.5

LRRC49-223, Transcript of leucine rich repeat containing 49, human

APPRIS ALT1 TSL 2 BASIC

Gene LRRC49, Length 2,586 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC49-223	ENST00000560369	LZTS1	Q9Y250	596 aa		5.73	□□□□□ -1.49
LRRC49-223	ENST00000560369	SUPT3H	B4E1H0	165 aa		5.73	□□□□□ -1.49
LRRC49-223	ENST00000560369	NR5A2	O00482	541 aa		5.73	□□□□□ -1.49
LRRC49-223	ENST00000560369	GREM1	O60565	184 aa		5.73	□□□□□ -1.49
LRRC49-223	ENST00000560369	TBL1X	O60907	577 aa		5.73	□□□□□ -1.49
LRRC49-223	ENST00000560369	PFDN1	O60925	122 aa		5.73	□□□□□ -1.49
LRRC49-223	ENST00000560369	SUPT3H	O75486	399 aa		5.73	□□□□□ -1.49
LRRC49-223	ENST00000560369	ZNF189	O75820	626 aa	Predicted RBP	5.73	□□□□□ -1.49
LRRC49-223	ENST00000560369	SRP72	O76094	671 aa	Known RBP	5.73	□□□□□ -1.49
LRRC49-223	ENST00000560369	C1R	P00736	705 aa		5.73	□□□□□ -1.49
LRRC49-223	ENST00000560369	RBP1	P09455	135 aa		5.73	□□□□□ -1.49
LRRC49-223	ENST00000560369	HLA-DPA1	P20036	260 aa		5.73	□□□□□ -1.49
LRRC49-223	ENST00000560369	CAPN3	P20807	821 aa		5.73	□□□□□ -1.49
LRRC49-223	ENST00000560369	ITGB8	P26012	769 aa		5.73	□□□□□ -1.49
LRRC49-223	ENST00000560369	RPL10	P27635	214 aa	Known RBP	5.73	□□□□□ -1.49
LRRC49-223	ENST00000560369	MC4R	P32245	332 aa		5.73	□□□□□ -1.49
LRRC49-223	ENST00000560369	POLD2	P49005	469 aa		5.73	□□□□□ -1.49
LRRC49-223	ENST00000560369	NUBP1	P53384	320 aa		5.73	□□□□□ -1.49
LRRC49-223	ENST00000560369	CDH4	P55283	916 aa		5.73	□□□□□ -1.49
LRRC49-223	ENST00000560369	DEFB103A	P81534	67 aa		5.73	□□□□□ -1.49
LRRC49-223	ENST00000560369	CYP4F8	P98187	520 aa		5.73	□□□□□ -1.49
LRRC49-223	ENST00000560369	CREB5	Q02930	508 aa		5.73	□□□□□ -1.49
LRRC49-223	ENST00000560369	NOG	Q13253	232 aa		5.73	□□□□□ -1.49
LRRC49-223	ENST00000560369	MAP7	Q14244	749 aa		5.73	□□□□□ -1.49
LRRC49-223	ENST00000560369	TYSND1	Q2T9J0	566 aa		5.73	□□□□□ -1.49
LRRC49-223	ENST00000560369	DEFB115	Q30KQ5	88 aa		5.73	□□□□□ -1.49
LRRC49-223	ENST00000560369	MYLK3	Q32MK0	819 aa		5.73	□□□□□ -1.49
LRRC49-223	ENST00000560369	VPS26B	Q4G0F5	336 aa		5.73	□□□□□ -1.49
LRRC49-223	ENST00000560369	LRRC73	Q5JTD7	316 aa		5.73	□□□□□ -1.49
LRRC49-223	ENST00000560369	HECTD3	Q5T447	861 aa		5.73	□□□□□ -1.49
LRRC49-223	ENST00000560369	C6orf52	Q5T4I8	152 aa		5.73	□□□□□ -1.49
LRRC49-223	ENST00000560369	ALG1L	Q6GMV1	187 aa		5.73	□□□□□ -1.49
LRRC49-223	ENST00000560369	KLC3	Q6P597	504 aa		5.73	□□□□□ -1.49
LRRC49-223	ENST00000560369	RFLNA	Q6ZTI6	216 aa		5.73	□□□□□ -1.49
LRRC49-223	ENST00000560369	ANKS3	Q6ZW76	656 aa		5.73	□□□□□ -1.49
LRRC49-223	ENST00000560369	ADGRG6	Q86SQ4	1221 aa		5.73	□□□□□ -1.49
LRRC49-223	ENST00000560369	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	5.73	□□□□□ -1.49
LRRC49-223	ENST00000560369	SYVN1	Q86TM6	617 aa		5.73	□□□□□ -1.49
LRRC49-223	ENST00000560369	LCA5	Q86VQ0	697 aa		5.73	□□□□□ -1.49
LRRC49-223	ENST00000560369	ZSWIM9	Q86XI8	627 aa		5.73	□□□□□ -1.49
LRRC49-223	ENST00000560369	CAMK1D	Q8IU85	385 aa		5.73	□□□□□ -1.49
LRRC49-223	ENST00000560369	DDIAS	Q8IXT1	998 aa		5.73	□□□□□ -1.49
LRRC49-223	ENST00000560369	CPNE9	Q8IYJ1	553 aa		5.73	□□□□□ -1.49
LRRC49-223	ENST00000560369	PGAM4	Q8N0Y7	254 aa		5.73	□□□□□ -1.49
LRRC49-223	ENST00000560369	OR2T11	Q8NH01	316 aa		5.73	□□□□□ -1.49
LRRC49-223	ENST00000560369	ZFP28	Q8NHY6	868 aa		5.73	□□□□□ -1.49
LRRC49-223	ENST00000560369	DIS3L	Q8TF46	1054 aa	Known RBP	5.73	□□□□□ -1.49
LRRC49-223	ENST00000560369	TWIST2	Q8WVJ9	160 aa		5.73	□□□□□ -1.49
LRRC49-223	ENST00000560369	SNRNP27	Q8WVK2	155 aa	Known RBP	5.73	□□□□□ -1.49
LRRC49-223	ENST00000560369	ABTB1	Q969K4	478 aa	Predicted RBP	5.73	□□□□□ -1.49
LRRC49-223	ENST00000560369	FUBP1	Q96AE4	644 aa	Known RBP	5.73	□□□□□ -1.49
LRRC49-223	ENST00000560369	L3HYPDH	Q96EM0	354 aa		5.73	□□□□□ -1.49
LRRC49-223	ENST00000560369	C19orf60	Q96EN9	201 aa		5.73	□□□□□ -1.49
LRRC49-223	ENST00000560369	TSEN34	Q9BSV6	310 aa	Known RBP	5.73	□□□□□ -1.49
LRRC49-223	ENST00000560369	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	5.73	□□□□□ -1.49
LRRC49-223	ENST00000560369	ELAC1	Q9H777	363 aa	Known RBP	5.73	□□□□□ -1.49
LRRC49-223	ENST00000560369	EFCAB1	Q9HAE3	211 aa		5.73	□□□□□ -1.49
LRRC49-223	ENST00000560369	SLAMF8	Q9P0V8	285 aa		5.73	□□□□□ -1.49
LRRC49-223	ENST00000560369	FNIP2	Q9P278	1114 aa		5.73	□□□□□ -1.49
LRRC49-223	ENST00000560369	MTRR	Q9UBK8	725 aa		5.73	□□□□□ -1.49
LRRC49-223	ENST00000560369	LHX3	Q9UBR4	397 aa		5.73	□□□□□ -1.49
LRRC49-223	ENST00000560369	MBD1	Q9UIS9	605 aa	Predicted RBP	5.73	□□□□□ -1.49
LRRC49-223	ENST00000560369	PCDHB9	Q9Y5E1	797 aa		5.73	□□□□□ -1.49
LRRC49-223	ENST00000560369	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	5.73	□□□□□ -1.49
LRRC49-223	ENST00000560369	PRSS21	Q9Y6M0	314 aa		5.73	□□□□□ -1.49
LRRC49-223	ENST00000560369	TRIO	O75962	3097 aa		5.73	□□□□□ -1.49
LRRC49-223	ENST00000560369	VCAN	P13611	3396 aa		5.73	□□□□□ -1.49
LRRC49-223	ENST00000560369	ZNF106	Q9H2Y7	1883 aa	Known RBP	5.73	□□□□□ -1.49
LRRC49-223	ENST00000560369	MTCL1	Q9Y4B5	1905 aa	Known RBP	5.73	□□□□□ -1.49
LRRC49-223	ENST00000560369	ASPDH	A6ND91	283 aa		5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	TRPC5OS	A6NMA1	111 aa		5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	ANKRD66	B4E2M5	251 aa		5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	BTN3A1	O00481	513 aa		5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	TRIM24	O15164	1050 aa		5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	CRTAM	O95727	393 aa		5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	CLPTM1	O96005	669 aa		5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	ALDH1A1	P00352	501 aa		5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	GFAP	P14136	432 aa		5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	PSMC3	P17980	439 aa		5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	UGT1A1	P22309	533 aa		5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	UGT1A4	P22310	534 aa		5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	ME2	P23368	584 aa		5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	PAX3	P23760	479 aa		5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	UGT1A3	P35503	534 aa		5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	UGT1A5	P35504	534 aa		5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	CSK	P41240	450 aa		5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	ZFP36L2	P47974	494 aa	Known RBP	5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	ALDH7A1	P49419	539 aa	Known RBP	5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	GALK1	P51570	392 aa		5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	SUOX	P51687	545 aa		5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	HK2	P52789	917 aa		5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	MYBPC1	Q00872	1141 aa		5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	TWF1	Q12792	350 aa		5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	GEN1	Q17RS7	908 aa		5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	SLC44A4	Q53GD3	710 aa		5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	ZRANB3	Q5FWF4	1079 aa		5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	C6orf10	Q5SRN2	563 aa		5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	OGFRL1	Q5TC84	451 aa	Predicted RBP	5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	HMBOX1	Q6NT76	420 aa		5.72	□□□□□ -1.49
LRRC49-223	ENST00000560369	C16orf89	Q6UX73	402 aa		5.72	□□□□□ -1.49

Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms