RNA–Protein interactions for RNA: ENST00000559898.5

HDDC3-205, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,024 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-205ENST00000559898 SPATA16Q9BXB7 569 aa17.56■□□□□ 0.4
HDDC3-205ENST00000559898 DPH1Q9BZG8 443 aa17.56■□□□□ 0.4
HDDC3-205ENST00000559898 OR2AG1Q9H205 316 aa17.56■□□□□ 0.4
HDDC3-205ENST00000559898 SCHIP1Q9P0W5 487 aaPredicted RBP17.56■□□□□ 0.4
HDDC3-205ENST00000559898 ADGRG1Q9Y653 693 aa17.56■□□□□ 0.4
HDDC3-205ENST00000559898 A0A0A6YYK5 440 aaPredicted RBP17.55■□□□□ 0.4
HDDC3-205ENST00000559898 A6NCN8 305 aa17.55■□□□□ 0.4
HDDC3-205ENST00000559898 PSTPIP1O43586 416 aa17.55■□□□□ 0.4
HDDC3-205ENST00000559898 BUD23O43709 281 aaKnown RBP17.55■□□□□ 0.4
HDDC3-205ENST00000559898 KALRNO60229 2985 aa17.55■□□□□ 0.4
HDDC3-205ENST00000559898 SNX2O60749 519 aa17.55■□□□□ 0.4
HDDC3-205ENST00000559898 CPNE6O95741 557 aa17.55■□□□□ 0.4
HDDC3-205ENST00000559898 ZFXP17010 805 aaPredicted RBP17.55■□□□□ 0.4
HDDC3-205ENST00000559898 OLIG2Q13516 323 aa17.55■□□□□ 0.4
HDDC3-205ENST00000559898 CRTC3Q6UUV7 619 aa17.55■□□□□ 0.4
HDDC3-205ENST00000559898 RAD9BQ6WBX8 426 aa17.55■□□□□ 0.4
HDDC3-205ENST00000559898 ADGRG6Q86SQ4 1221 aa17.55■□□□□ 0.4
HDDC3-205ENST00000559898 VASH2Q86V25 355 aa17.55■□□□□ 0.4
HDDC3-205ENST00000559898 PIM3Q86V86 326 aa17.55■□□□□ 0.4
HDDC3-205ENST00000559898 ZNF567Q8N184 647 aa17.55■□□□□ 0.4
HDDC3-205ENST00000559898 SFRP1Q8N474 314 aa17.55■□□□□ 0.4
HDDC3-205ENST00000559898 SLC25A41Q8N5S1 370 aa17.55■□□□□ 0.4
HDDC3-205ENST00000559898 TFB1MQ8WVM0 346 aaKnown RBP17.55■□□□□ 0.4
HDDC3-205ENST00000559898 MRGPRX2Q96LB1 330 aa17.55■□□□□ 0.4
HDDC3-205ENST00000559898 ADGRE3Q9BY15 652 aa17.55■□□□□ 0.4
HDDC3-205ENST00000559898 PRDM8Q9NQV8 689 aa17.55■□□□□ 0.4
HDDC3-205ENST00000559898 VPS18Q9P253 973 aa17.55■□□□□ 0.4
HDDC3-205ENST00000559898 DNPEPQ9ULA0 475 aa17.55■□□□□ 0.4
HDDC3-205ENST00000559898 TEX51A0A1B0GUA7 166 aa17.54■□□□□ 0.4
HDDC3-205ENST00000559898 NUAK1O60285 661 aa17.54■□□□□ 0.4
HDDC3-205ENST00000559898 FGF3P11487 239 aaPredicted RBP17.54■□□□□ 0.4
HDDC3-205ENST00000559898 WNT3AP56704 352 aa17.54■□□□□ 0.4
HDDC3-205ENST00000559898 VAC14Q08AM6 782 aa17.54■□□□□ 0.4
HDDC3-205ENST00000559898 NFATC2Q13469 925 aa17.54■□□□□ 0.4
HDDC3-205ENST00000559898 PTPRCAPQ14761 206 aa17.54■□□□□ 0.4
HDDC3-205ENST00000559898 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.54■□□□□ 0.4
HDDC3-205ENST00000559898 BROXQ5VW32 411 aa17.54■□□□□ 0.4
HDDC3-205ENST00000559898 KATNAL2Q8IYT4 538 aa17.54■□□□□ 0.4
HDDC3-205ENST00000559898 TTC30BQ8N4P2 665 aa17.54■□□□□ 0.4
HDDC3-205ENST00000559898 ACRBPQ8NEB7 543 aa17.54■□□□□ 0.4
HDDC3-205ENST00000559898 CCHCR1Q8TD31 782 aa17.54■□□□□ 0.4
HDDC3-205ENST00000559898 NAT14Q8WUY8 206 aa17.54■□□□□ 0.4
HDDC3-205ENST00000559898 JPH3Q8WXH2 748 aaPredicted RBP17.54■□□□□ 0.4
HDDC3-205ENST00000559898 TTC9Q92623 222 aa17.54■□□□□ 0.4
HDDC3-205ENST00000559898 RNF31Q96EP0 1072 aa17.54■□□□□ 0.4
HDDC3-205ENST00000559898 GPR63Q9BZJ6 419 aa17.54■□□□□ 0.4
HDDC3-205ENST00000559898 MAGEE1Q9HCI5 957 aa17.54■□□□□ 0.4
HDDC3-205ENST00000559898 KCNK4Q9NYG8 393 aa17.54■□□□□ 0.4
HDDC3-205ENST00000559898 PCDHGA7Q9Y5G6 932 aa17.54■□□□□ 0.4
HDDC3-205ENST00000559898 FASNP49327 2511 aaKnown RBP17.53■□□□□ 0.4
HDDC3-205ENST00000559898 TMX2-CTNND1H3BSU7 103 aa17.53■□□□□ 0.4
HDDC3-205ENST00000559898 K7ENP7 123 aa17.53■□□□□ 0.4
HDDC3-205ENST00000559898 GRID2O43424 1007 aa17.53■□□□□ 0.4
HDDC3-205ENST00000559898 NDST3O95803 873 aa17.53■□□□□ 0.4
HDDC3-205ENST00000559898 LIMK2P53671 638 aa17.53■□□□□ 0.4
HDDC3-205ENST00000559898 EIF3IQ13347 325 aaKnown RBP17.53■□□□□ 0.4
HDDC3-205ENST00000559898 LY6DQ14210 128 aa17.53■□□□□ 0.4
HDDC3-205ENST00000559898 ODF2Q5BJF6 829 aa17.53■□□□□ 0.4
HDDC3-205ENST00000559898 TFDP3Q5H9I0 405 aa17.53■□□□□ 0.4
HDDC3-205ENST00000559898 SIRPB2Q5JXA9 342 aa17.53■□□□□ 0.4
HDDC3-205ENST00000559898 IYDQ6PHW0 289 aa17.53■□□□□ 0.4
HDDC3-205ENST00000559898 INO80CQ6PI98 192 aaPredicted RBP17.53■□□□□ 0.4
HDDC3-205ENST00000559898 CCDC50Q8IVM0 306 aa17.53■□□□□ 0.4
HDDC3-205ENST00000559898 ZNF547Q8IVP9 402 aa17.53■□□□□ 0.4
HDDC3-205ENST00000559898 TBC1D10AQ9BXI6 508 aa17.53■□□□□ 0.4
HDDC3-205ENST00000559898 LACRTQ9GZZ8 138 aa17.53■□□□□ 0.4
HDDC3-205ENST00000559898 HAUS2Q9NVX0 235 aa17.53■□□□□ 0.4
HDDC3-205ENST00000559898 OCIAD1Q9NX40 245 aa17.53■□□□□ 0.4
HDDC3-205ENST00000559898 LOC285095A0A1B0GVY8 99 aa17.52■□□□□ 0.4
HDDC3-205ENST00000559898 A8MU76 341 aa17.52■□□□□ 0.4
HDDC3-205ENST00000559898 SLC25A14O95258 325 aaPredicted RBP17.52■□□□□ 0.4
HDDC3-205ENST00000559898 PYGLP06737 847 aa17.52■□□□□ 0.4
HDDC3-205ENST00000559898 RBL1P28749 1068 aa17.52■□□□□ 0.4
HDDC3-205ENST00000559898 FASLGP48023 281 aa17.52■□□□□ 0.4
HDDC3-205ENST00000559898 NR2C2P49116 596 aa17.52■□□□□ 0.4
HDDC3-205ENST00000559898 BIRC2Q13490 618 aa17.52■□□□□ 0.4
HDDC3-205ENST00000559898 TFDP2Q14188 446 aa17.52■□□□□ 0.4
HDDC3-205ENST00000559898 ATP13A5Q4VNC0 1218 aa17.52■□□□□ 0.4
HDDC3-205ENST00000559898 ZNF569Q5MCW4 686 aa17.52■□□□□ 0.4
HDDC3-205ENST00000559898 SNAP47Q5SQN1 464 aa17.52■□□□□ 0.4
HDDC3-205ENST00000559898 C11orf63Q6NUN7 778 aa17.52■□□□□ 0.4
HDDC3-205ENST00000559898 RAVER1Q8IY67 606 aaKnown RBP17.52■□□□□ 0.4
HDDC3-205ENST00000559898 TRAM1L1Q8N609 369 aa17.52■□□□□ 0.4
HDDC3-205ENST00000559898 GLYATL1Q969I3 302 aa17.52■□□□□ 0.4
HDDC3-205ENST00000559898 QKIQ96PU8 341 aaKnown RBP eCLIP17.52■□□□□ 0.4
HDDC3-205ENST00000559898 CARD9Q9H257 536 aa17.52■□□□□ 0.4
HDDC3-205ENST00000559898 KLC4Q9NSK0 619 aa17.52■□□□□ 0.4
HDDC3-205ENST00000559898 KLHL8Q9P2G9 620 aaPredicted RBP17.52■□□□□ 0.4
HDDC3-205ENST00000559898 AHCTF1Q8WYP5 2266 aa17.52■□□□□ 0.4
HDDC3-205ENST00000559898 RGSL1A5PLK6 1076 aa17.51■□□□□ 0.39
HDDC3-205ENST00000559898 NVLO15381 856 aaKnown RBP17.51■□□□□ 0.39
HDDC3-205ENST00000559898 UGT1A9O60656 530 aa17.51■□□□□ 0.39
HDDC3-205ENST00000559898 ZRANB2O95218 330 aaKnown RBP eCLIP17.51■□□□□ 0.39
HDDC3-205ENST00000559898 NDUFA10O95299 355 aa17.51■□□□□ 0.39
HDDC3-205ENST00000559898 THRAP10827 490 aa17.51■□□□□ 0.39
HDDC3-205ENST00000559898 UGT1A6P19224 532 aa17.51■□□□□ 0.39
HDDC3-205ENST00000559898 UGT1A1P22309 533 aa17.51■□□□□ 0.39
HDDC3-205ENST00000559898 UGT1A4P22310 534 aa17.51■□□□□ 0.39
HDDC3-205ENST00000559898 FECHP22830 423 aa17.51■□□□□ 0.39
HDDC3-205ENST00000559898 UGT1A3P35503 534 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms