RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 EBF1Q9UH73 591 aa12.09□□□□□ -0.47
HERC1-205ENST00000559886 ZFR2Q9UPR6 939 aaKnown RBP12.09□□□□□ -0.47
HERC1-205ENST00000559886 VWA7Q9Y334 891 aa12.09□□□□□ -0.47
HERC1-205ENST00000559886 IGLV3-16A0A075B6K0 115 aa12.09□□□□□ -0.47
HERC1-205ENST00000559886 PRPF4O43172 522 aaKnown RBP eCLIP12.09□□□□□ -0.47
HERC1-205ENST00000559886 TYROBPO43914 113 aa12.09□□□□□ -0.47
HERC1-205ENST00000559886 IGLV3-19P01714 112 aa12.09□□□□□ -0.47
HERC1-205ENST00000559886 ZNF7P17097 686 aaPredicted RBP12.09□□□□□ -0.47
HERC1-205ENST00000559886 TAS2R39P59534 338 aa12.09□□□□□ -0.47
HERC1-205ENST00000559886 RPS21P63220 83 aaKnown RBP12.09□□□□□ -0.47
HERC1-205ENST00000559886 ITIH4Q14624 930 aa12.09□□□□□ -0.47
HERC1-205ENST00000559886 ZKSCAN8Q15776 578 aaPredicted RBP12.09□□□□□ -0.47
HERC1-205ENST00000559886 SETMARQ53H47 684 aaPredicted RBP12.09□□□□□ -0.47
HERC1-205ENST00000559886 HECTD2Q5U5R9 776 aa12.09□□□□□ -0.47
HERC1-205ENST00000559886 SEL1L3Q68CR1 1132 aa12.09□□□□□ -0.47
HERC1-205ENST00000559886 FAM45BPQ6NSW5 357 aa12.09□□□□□ -0.47
HERC1-205ENST00000559886 NEK5Q6P3R8 708 aa12.09□□□□□ -0.47
HERC1-205ENST00000559886 CEP97Q8IW35 865 aa12.09□□□□□ -0.47
HERC1-205ENST00000559886 SPEM1Q8N4L4 309 aa12.09□□□□□ -0.47
HERC1-205ENST00000559886 FAM45AQ8TCE6 357 aa12.09□□□□□ -0.47
HERC1-205ENST00000559886 NECAB3Q96P71 396 aaPredicted RBP12.09□□□□□ -0.47
HERC1-205ENST00000559886 VPS35Q96QK1 796 aa12.09□□□□□ -0.47
HERC1-205ENST00000559886 OLFM1Q99784 485 aa12.09□□□□□ -0.47
HERC1-205ENST00000559886 CD93Q9NPY3 652 aa12.09□□□□□ -0.47
HERC1-205ENST00000559886 ZDHHC3Q9NYG2 299 aa12.09□□□□□ -0.47
HERC1-205ENST00000559886 SIT1Q9Y3P8 196 aa12.09□□□□□ -0.47
HERC1-205ENST00000559886 PRMT5O14744 637 aaPredicted RBP12.08□□□□□ -0.48
HERC1-205ENST00000559886 SPAG7O75391 227 aa12.08□□□□□ -0.48
HERC1-205ENST00000559886 SOD1P00441 154 aa12.08□□□□□ -0.48
HERC1-205ENST00000559886 ESR1P03372 595 aa12.08□□□□□ -0.48
HERC1-205ENST00000559886 MPOP05164 745 aa12.08□□□□□ -0.48
HERC1-205ENST00000559886 STMN1P16949 149 aa12.08□□□□□ -0.48
HERC1-205ENST00000559886 SAT1P21673 171 aa12.08□□□□□ -0.48
HERC1-205ENST00000559886 RPS3P23396 243 aaKnown RBP eCLIP12.08□□□□□ -0.48
HERC1-205ENST00000559886 FMO4P31512 558 aa12.08□□□□□ -0.48
HERC1-205ENST00000559886 CDKN2DP55273 166 aa12.08□□□□□ -0.48
HERC1-205ENST00000559886 RAB10P61026 200 aa12.08□□□□□ -0.48
HERC1-205ENST00000559886 PDE1CQ14123 709 aaPredicted RBP12.08□□□□□ -0.48
HERC1-205ENST00000559886 MAP7D1Q3KQU3 841 aa12.08□□□□□ -0.48
HERC1-205ENST00000559886 TMEM259Q4ZIN3 620 aa12.08□□□□□ -0.48
HERC1-205ENST00000559886 GPRC6AQ5T6X5 926 aa12.08□□□□□ -0.48
HERC1-205ENST00000559886 KDM7AQ6ZMT4 941 aa12.08□□□□□ -0.48
HERC1-205ENST00000559886 FAM124AQ86V42 546 aa12.08□□□□□ -0.48
HERC1-205ENST00000559886 PGBD3Q8N328 593 aa12.08□□□□□ -0.48
HERC1-205ENST00000559886 ARFGAP2Q8N6H7 521 aa12.08□□□□□ -0.48
HERC1-205ENST00000559886 TSTD1Q8NFU3 115 aa12.08□□□□□ -0.48
HERC1-205ENST00000559886 BTN2A2Q8WVV5 523 aa12.08□□□□□ -0.48
HERC1-205ENST00000559886 CCDC97Q96F63 343 aaPredicted RBP12.08□□□□□ -0.48
HERC1-205ENST00000559886 COPS8Q99627 209 aa12.08□□□□□ -0.48
HERC1-205ENST00000559886 BOCQ9BWV1 1114 aa12.08□□□□□ -0.48
HERC1-205ENST00000559886 C1QTNF2Q9BXJ5 285 aa12.08□□□□□ -0.48
HERC1-205ENST00000559886 MKS1Q9NXB0 559 aa12.08□□□□□ -0.48
HERC1-205ENST00000559886 SMG5Q9UPR3 1016 aaKnown RBP12.08□□□□□ -0.48
HERC1-205ENST00000559886 PCDHB1Q9Y5F3 818 aa12.08□□□□□ -0.48
HERC1-205ENST00000559886 COMMD10Q9Y6G5 202 aa12.08□□□□□ -0.48
HERC1-205ENST00000559886 TMEM120BA0PK00 339 aa12.08□□□□□ -0.48
HERC1-205ENST00000559886 RNGTTO60942 597 aaKnown RBP12.08□□□□□ -0.48
HERC1-205ENST00000559886 C2P06681 752 aa12.08□□□□□ -0.48
HERC1-205ENST00000559886 PKMP14618 531 aaKnown RBP12.08□□□□□ -0.48
HERC1-205ENST00000559886 CRABP2P29373 138 aa12.08□□□□□ -0.48
HERC1-205ENST00000559886 SLC18A1P54219 525 aa12.08□□□□□ -0.48
HERC1-205ENST00000559886 SLC12A2P55011 1212 aa12.08□□□□□ -0.48
HERC1-205ENST00000559886 TIAL1Q01085 375 aaKnown RBP eCLIP12.08□□□□□ -0.48
HERC1-205ENST00000559886 MPP2Q14168 576 aa12.08□□□□□ -0.48
HERC1-205ENST00000559886 PPM1JQ5JR12 505 aa12.08□□□□□ -0.48
HERC1-205ENST00000559886 CTSL3PQ5NE16 218 aa12.08□□□□□ -0.48
HERC1-205ENST00000559886 ANO7Q6IWH7 933 aa12.08□□□□□ -0.48
HERC1-205ENST00000559886 HORMAD1Q86X24 394 aa12.08□□□□□ -0.48
HERC1-205ENST00000559886 PELI3Q8N2H9 469 aa12.08□□□□□ -0.48
HERC1-205ENST00000559886 GLYATL1Q969I3 302 aa12.08□□□□□ -0.48
HERC1-205ENST00000559886 TSPAN17Q96FV3 270 aa12.08□□□□□ -0.48
HERC1-205ENST00000559886 APOPT1Q96IL0 206 aa12.08□□□□□ -0.48
HERC1-205ENST00000559886 CABS1Q96KC9 395 aa12.08□□□□□ -0.48
HERC1-205ENST00000559886 HHIPQ96QV1 700 aa12.08□□□□□ -0.48
HERC1-205ENST00000559886 SELENOSQ9BQE4 189 aa12.08□□□□□ -0.48
HERC1-205ENST00000559886 CLPBQ9H078 707 aa12.08□□□□□ -0.48
HERC1-205ENST00000559886 CCDC68Q9H2F9 335 aa12.08□□□□□ -0.48
HERC1-205ENST00000559886 KCNK9Q9NPC2 374 aa12.08□□□□□ -0.48
HERC1-205ENST00000559886 PCMTD2Q9NV79 361 aa12.08□□□□□ -0.48
HERC1-205ENST00000559886 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.08□□□□□ -0.48
HERC1-205ENST00000559886 MED16Q9Y2X0 877 aa12.08□□□□□ -0.48
HERC1-205ENST00000559886 TBC1D3DA0A087WVF3 549 aa12.07□□□□□ -0.48
HERC1-205ENST00000559886 TBC1D3IA0A087WXS9 549 aa12.07□□□□□ -0.48
HERC1-205ENST00000559886 TBC1D3EA0A087X179 549 aa12.07□□□□□ -0.48
HERC1-205ENST00000559886 TBC1D3KA0A087X1G2 549 aa12.07□□□□□ -0.48
HERC1-205ENST00000559886 A0A096LPK6 155 aa12.07□□□□□ -0.48
HERC1-205ENST00000559886 A0A1W2PQU0 124 aa12.07□□□□□ -0.48
HERC1-205ENST00000559886 TBC1D3FA6NER0 549 aaPredicted RBP12.07□□□□□ -0.48
HERC1-205ENST00000559886 TBC1D3LB9A6J9 549 aa12.07□□□□□ -0.48
HERC1-205ENST00000559886 K7ESM1 405 aa12.07□□□□□ -0.48
HERC1-205ENST00000559886 POLR3GO15318 223 aaPredicted RBP12.07□□□□□ -0.48
HERC1-205ENST00000559886 TBC1D3HP0C7X1 549 aa12.07□□□□□ -0.48
HERC1-205ENST00000559886 SLC35E2BP0CK96 405 aa12.07□□□□□ -0.48
HERC1-205ENST00000559886 CD9P21926 228 aa12.07□□□□□ -0.48
HERC1-205ENST00000559886 FDXRP22570 491 aa12.07□□□□□ -0.48
HERC1-205ENST00000559886 ACSL1P33121 698 aa12.07□□□□□ -0.48
HERC1-205ENST00000559886 NSG1P42857 185 aa12.07□□□□□ -0.48
HERC1-205ENST00000559886 B4GALNT1Q00973 533 aa12.07□□□□□ -0.48
HERC1-205ENST00000559886 SIGLEC14Q08ET2 396 aa12.07□□□□□ -0.48
HERC1-205ENST00000559886 FGL2Q14314 439 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms