RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 TTPAP49638 278 aa17.68■□□□□ 0.42
SNX1-208ENST00000559844 PLK1P53350 603 aa17.68■□□□□ 0.42
SNX1-208ENST00000559844 TMEM207Q6UWW9 146 aa17.68■□□□□ 0.42
SNX1-208ENST00000559844 TPRG1Q6ZUI0 275 aa17.68■□□□□ 0.42
SNX1-208ENST00000559844 ACAD11Q709F0 780 aa17.68■□□□□ 0.42
SNX1-208ENST00000559844 UBALD2Q8IYN6 164 aa17.68■□□□□ 0.42
SNX1-208ENST00000559844 AFAP1L2Q8N4X5 818 aa17.68■□□□□ 0.42
SNX1-208ENST00000559844 LPGAT1Q92604 370 aa17.68■□□□□ 0.42
SNX1-208ENST00000559844 FAR2Q96K12 515 aa17.68■□□□□ 0.42
SNX1-208ENST00000559844 UHRF1Q96T88 793 aaPredicted RBP17.68■□□□□ 0.42
SNX1-208ENST00000559844 P2RY13Q9BPV8 354 aa17.68■□□□□ 0.42
SNX1-208ENST00000559844 C1orf21Q9H246 121 aa17.68■□□□□ 0.42
SNX1-208ENST00000559844 TCF7L2Q9NQB0 619 aa17.68■□□□□ 0.42
SNX1-208ENST00000559844 POLR3BQ9NW08 1133 aaPredicted RBP17.68■□□□□ 0.42
SNX1-208ENST00000559844 FBXL21Q9UKT6 434 aa17.68■□□□□ 0.42
SNX1-208ENST00000559844 CA14Q9ULX7 337 aa17.68■□□□□ 0.42
SNX1-208ENST00000559844 PKP3Q9Y446 797 aa17.68■□□□□ 0.42
SNX1-208ENST00000559844 UBA6A0AVT1 1052 aaPredicted RBP17.68■□□□□ 0.42
SNX1-208ENST00000559844 A8MT66 165 aa17.68■□□□□ 0.42
SNX1-208ENST00000559844 SMIM24O75264 130 aa17.68■□□□□ 0.42
SNX1-208ENST00000559844 RHOBTB1O94844 696 aa17.68■□□□□ 0.42
SNX1-208ENST00000559844 PGLSO95336 258 aa17.68■□□□□ 0.42
SNX1-208ENST00000559844 MC4RP32245 332 aa17.68■□□□□ 0.42
SNX1-208ENST00000559844 GALNT1Q10472 559 aaPredicted RBP17.68■□□□□ 0.42
SNX1-208ENST00000559844 MLF2Q15773 248 aaPredicted RBP17.68■□□□□ 0.42
SNX1-208ENST00000559844 GEN1Q17RS7 908 aa17.68■□□□□ 0.42
SNX1-208ENST00000559844 SLC9B1Q4ZJI4 515 aa17.68■□□□□ 0.42
SNX1-208ENST00000559844 ATXN7L2Q5T6C5 722 aaPredicted RBP17.68■□□□□ 0.42
SNX1-208ENST00000559844 PIM3Q86V86 326 aa17.68■□□□□ 0.42
SNX1-208ENST00000559844 PNPLA1Q8N8W4 532 aa17.68■□□□□ 0.42
SNX1-208ENST00000559844 LMLNQ96KR4 655 aa17.68■□□□□ 0.42
SNX1-208ENST00000559844 C19orf43Q9BQ61 176 aa17.68■□□□□ 0.42
SNX1-208ENST00000559844 CCDC28BQ9BUN5 200 aa17.68■□□□□ 0.42
SNX1-208ENST00000559844 TAS2R13Q9NYV9 303 aa17.68■□□□□ 0.42
SNX1-208ENST00000559844 ZDHHC2Q9UIJ5 367 aa17.68■□□□□ 0.42
SNX1-208ENST00000559844 FKBPLQ9UIM3 349 aa17.68■□□□□ 0.42
SNX1-208ENST00000559844 SLC27A6Q9Y2P4 619 aa17.68■□□□□ 0.42
SNX1-208ENST00000559844 ZNF711Q9Y462 761 aa17.68■□□□□ 0.42
SNX1-208ENST00000559844 PCDHB9Q9Y5E1 797 aa17.68■□□□□ 0.42
SNX1-208ENST00000559844 TRPC5OSA6NMA1 111 aa17.67■□□□□ 0.42
SNX1-208ENST00000559844 SRP72O76094 671 aaKnown RBP17.67■□□□□ 0.42
SNX1-208ENST00000559844 GLULP15104 373 aa17.67■□□□□ 0.42
SNX1-208ENST00000559844 CD1DP15813 335 aa17.67■□□□□ 0.42
SNX1-208ENST00000559844 ZNF37AP17032 561 aaPredicted RBP17.67■□□□□ 0.42
SNX1-208ENST00000559844 NCF2P19878 526 aaPredicted RBP17.67■□□□□ 0.42
SNX1-208ENST00000559844 PRDX6P30041 224 aa17.67■□□□□ 0.42
SNX1-208ENST00000559844 NFKB2Q00653 900 aa17.67■□□□□ 0.42
SNX1-208ENST00000559844 BCL2L1Q07817 233 aa17.67■□□□□ 0.42
SNX1-208ENST00000559844 ISCA2Q86U28 154 aa17.67■□□□□ 0.42
SNX1-208ENST00000559844 PHTF2Q8N3S3 785 aa17.67■□□□□ 0.42
SNX1-208ENST00000559844 RHEBL1Q8TAI7 183 aa17.67■□□□□ 0.42
SNX1-208ENST00000559844 AGR3Q8TD06 166 aa17.67■□□□□ 0.42
SNX1-208ENST00000559844 CMTM5Q96DZ9 223 aa17.67■□□□□ 0.42
SNX1-208ENST00000559844 TRMOQ9BU70 441 aa17.67■□□□□ 0.42
SNX1-208ENST00000559844 TFB2MQ9H5Q4 396 aaKnown RBP17.67■□□□□ 0.42
SNX1-208ENST00000559844 COMMD10Q9Y6G5 202 aa17.67■□□□□ 0.42
SNX1-208ENST00000559844 GRID2O43424 1007 aa17.66■□□□□ 0.42
SNX1-208ENST00000559844 MAGEC1O60732 1142 aa17.66■□□□□ 0.42
SNX1-208ENST00000559844 SOCS5O75159 536 aa17.66■□□□□ 0.42
SNX1-208ENST00000559844 KAT7O95251 611 aa17.66■□□□□ 0.42
SNX1-208ENST00000559844 IGSF6O95976 241 aa17.66■□□□□ 0.42
SNX1-208ENST00000559844 MT-CO1P00395 513 aa17.66■□□□□ 0.42
SNX1-208ENST00000559844 PYGLP06737 847 aa17.66■□□□□ 0.42
SNX1-208ENST00000559844 IMPDH1P20839 514 aa17.66■□□□□ 0.42
SNX1-208ENST00000559844 CD9P21926 228 aa17.66■□□□□ 0.42
SNX1-208ENST00000559844 GALK1P51570 392 aa17.66■□□□□ 0.42
SNX1-208ENST00000559844 TIAL1Q01085 375 aaKnown RBP eCLIP17.66■□□□□ 0.42
SNX1-208ENST00000559844 PON2Q15165 354 aa17.66■□□□□ 0.42
SNX1-208ENST00000559844 PLEKHG6Q3KR16 790 aa17.66■□□□□ 0.42
SNX1-208ENST00000559844 FUT11Q495W5 492 aa17.66■□□□□ 0.42
SNX1-208ENST00000559844 PITRM1Q5JRX3 1037 aa17.66■□□□□ 0.42
SNX1-208ENST00000559844 AHI1Q8N157 1196 aa17.66■□□□□ 0.42
SNX1-208ENST00000559844 TERB1Q8NA31 727 aa17.66■□□□□ 0.42
SNX1-208ENST00000559844 MAPK15Q8TD08 544 aa17.66■□□□□ 0.42
SNX1-208ENST00000559844 L3HYPDHQ96EM0 354 aa17.66■□□□□ 0.42
SNX1-208ENST00000559844 GPR63Q9BZJ6 419 aa17.66■□□□□ 0.42
SNX1-208ENST00000559844 ALG9Q9H6U8 611 aa17.66■□□□□ 0.42
SNX1-208ENST00000559844 FBRSL1Q9HCM7 1045 aaKnown RBP17.66■□□□□ 0.42
SNX1-208ENST00000559844 WNT16Q9UBV4 365 aa17.66■□□□□ 0.42
SNX1-208ENST00000559844 INTS6Q9UL03 887 aaKnown RBP17.66■□□□□ 0.42
SNX1-208ENST00000559844 CDYLQ9Y232 598 aa17.66■□□□□ 0.42
SNX1-208ENST00000559844 TPBGLP0DKB5 382 aa17.66■□□□□ 0.42
SNX1-208ENST00000559844 FMO4P31512 558 aa17.66■□□□□ 0.42
SNX1-208ENST00000559844 CCR10P46092 362 aa17.66■□□□□ 0.42
SNX1-208ENST00000559844 CPA2P48052 419 aa17.66■□□□□ 0.42
SNX1-208ENST00000559844 PREPLQ4J6C6 727 aaPredicted RBP17.66■□□□□ 0.42
SNX1-208ENST00000559844 ZRANB3Q5FWF4 1079 aa17.66■□□□□ 0.42
SNX1-208ENST00000559844 ADIPOR2Q86V24 386 aa17.66■□□□□ 0.42
SNX1-208ENST00000559844 SFTPA1Q8IWL2 248 aa17.66■□□□□ 0.42
SNX1-208ENST00000559844 PIH1D2Q8WWB5 315 aa17.66■□□□□ 0.42
SNX1-208ENST00000559844 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.66■□□□□ 0.42
SNX1-208ENST00000559844 MOCOSQ96EN8 888 aa17.66■□□□□ 0.42
SNX1-208ENST00000559844 MSANTD3Q96H12 275 aa17.66■□□□□ 0.42
SNX1-208ENST00000559844 TM6SF2Q9BZW4 377 aa17.66■□□□□ 0.42
SNX1-208ENST00000559844 CYP4F12Q9HCS2 524 aa17.66■□□□□ 0.42
SNX1-208ENST00000559844 ANKRD36A6QL64 1941 aa17.66■□□□□ 0.42
SNX1-208ENST00000559844 A0A0C4DFX4 3053 aa17.65■□□□□ 0.42
SNX1-208ENST00000559844 TBC1D3BA6NDS4 549 aa17.65■□□□□ 0.42
SNX1-208ENST00000559844 NEMP2A6NFY4 417 aa17.65■□□□□ 0.42
SNX1-208ENST00000559844 K7ERQ8 282 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms