RNA–Protein interactions for RNA: ENST00000559192.5

USP3-210, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 5,499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-210ENST00000559192 LPPQ93052 612 aa7.08□□□□□ -1.28
USP3-210ENST00000559192 GLT1D1Q96MS3 346 aa7.08□□□□□ -1.28
USP3-210ENST00000559192 FEM1AQ9BSK4 669 aa7.08□□□□□ -1.28
USP3-210ENST00000559192 POLE4Q9NR33 117 aa7.08□□□□□ -1.28
USP3-210ENST00000559192 MKS1Q9NXB0 559 aa7.08□□□□□ -1.28
USP3-210ENST00000559192 PDE10AQ9Y233 779 aa7.08□□□□□ -1.28
USP3-210ENST00000559192 NUMBLQ9Y6R0 609 aa7.08□□□□□ -1.28
USP3-210ENST00000559192 ADAMTSL3P82987 1691 aa7.08□□□□□ -1.28
USP3-210ENST00000559192 PAGE1O75459 146 aa7.08□□□□□ -1.28
USP3-210ENST00000559192 CCNKO75909 580 aa7.08□□□□□ -1.28
USP3-210ENST00000559192 SIX3O95343 332 aaPredicted RBP7.08□□□□□ -1.28
USP3-210ENST00000559192 CNPP09543 421 aaKnown RBP7.08□□□□□ -1.28
USP3-210ENST00000559192 CDK4P11802 303 aa7.08□□□□□ -1.28
USP3-210ENST00000559192 MZF1P28698 734 aaPredicted RBP7.08□□□□□ -1.28
USP3-210ENST00000559192 HALP42357 657 aa7.08□□□□□ -1.28
USP3-210ENST00000559192 PURAQ00577 322 aaKnown RBP7.08□□□□□ -1.28
USP3-210ENST00000559192 PIGFQ07326 219 aa7.08□□□□□ -1.28
USP3-210ENST00000559192 MADCAM1Q13477 382 aa7.08□□□□□ -1.28
USP3-210ENST00000559192 PIGGQ5H8A4 983 aa7.08□□□□□ -1.28
USP3-210ENST00000559192 RBM20Q5T481 1227 aaKnown RBP7.08□□□□□ -1.28
USP3-210ENST00000559192 CHSY3Q70JA7 882 aa7.08□□□□□ -1.28
USP3-210ENST00000559192 ERMP1Q7Z2K6 904 aa7.08□□□□□ -1.28
USP3-210ENST00000559192 PIM3Q86V86 326 aa7.08□□□□□ -1.28
USP3-210ENST00000559192 ZC3HC1Q86WB0 502 aaKnown RBP7.08□□□□□ -1.28
USP3-210ENST00000559192 WDR36Q8NI36 951 aaKnown RBP7.08□□□□□ -1.28
USP3-210ENST00000559192 DQX1Q8TE96 717 aaKnown RBP7.08□□□□□ -1.28
USP3-210ENST00000559192 NUAK2Q9H093 628 aa7.08□□□□□ -1.28
USP3-210ENST00000559192 MARCH7Q9H992 704 aa7.08□□□□□ -1.28
USP3-210ENST00000559192 TRPV5Q9NQA5 729 aa7.08□□□□□ -1.28
USP3-210ENST00000559192 UXTQ9UBK9 157 aaPredicted RBP7.08□□□□□ -1.28
USP3-210ENST00000559192 PFDN2Q9UHV9 154 aa7.08□□□□□ -1.28
USP3-210ENST00000559192 MAST2Q6P0Q8 1798 aa7.08□□□□□ -1.28
USP3-210ENST00000559192 FGF10O15520 208 aaPredicted RBP7.08□□□□□ -1.28
USP3-210ENST00000559192 FTH1P02794 183 aa7.08□□□□□ -1.28
USP3-210ENST00000559192 GPIP06744 558 aa7.08□□□□□ -1.28
USP3-210ENST00000559192 KPNA1P52294 538 aaPredicted RBP7.08□□□□□ -1.28
USP3-210ENST00000559192 IL2P60568 153 aa7.08□□□□□ -1.28
USP3-210ENST00000559192 PPP1R8Q12972 351 aaKnown RBP7.08□□□□□ -1.28
USP3-210ENST00000559192 PRKG2Q13237 762 aa7.08□□□□□ -1.28
USP3-210ENST00000559192 C1DQ13901 141 aaKnown RBP7.08□□□□□ -1.28
USP3-210ENST00000559192 VGLL4Q14135 290 aa7.08□□□□□ -1.28
USP3-210ENST00000559192 ATP13A5Q4VNC0 1218 aa7.08□□□□□ -1.28
USP3-210ENST00000559192 CTU1Q7Z7A3 348 aaKnown RBP7.08□□□□□ -1.28
USP3-210ENST00000559192 HIPK1Q86Z02 1210 aa7.08□□□□□ -1.28
USP3-210ENST00000559192 LRRC17Q8N6Y2 441 aa7.08□□□□□ -1.28
USP3-210ENST00000559192 LINGO1Q96FE5 620 aa7.08□□□□□ -1.28
USP3-210ENST00000559192 EXOC2Q96KP1 924 aa7.08□□□□□ -1.28
USP3-210ENST00000559192 TMEM74Q96NL1 305 aa7.08□□□□□ -1.28
USP3-210ENST00000559192 KCNA7Q96RP8 456 aa7.08□□□□□ -1.28
USP3-210ENST00000559192 MROH8Q9H579 483 aa7.08□□□□□ -1.28
USP3-210ENST00000559192 PRDM5Q9NQX1 630 aaPredicted RBP7.08□□□□□ -1.28
USP3-210ENST00000559192 MOCS1Q9NZB8 636 aa7.08□□□□□ -1.28
USP3-210ENST00000559192 GNPTGQ9UJJ9 305 aa7.08□□□□□ -1.28
USP3-210ENST00000559192 ZNF221Q9UK13 617 aa7.08□□□□□ -1.28
USP3-210ENST00000559192 STYXL1Q9Y6J8 313 aa7.08□□□□□ -1.28
USP3-210ENST00000559192 EFCAB10A6NFE3 127 aa7.07□□□□□ -1.28
USP3-210ENST00000559192 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.07□□□□□ -1.28
USP3-210ENST00000559192 ADM5C9JUS6 153 aa7.07□□□□□ -1.28
USP3-210ENST00000559192 NDUFS2O75306 463 aa7.07□□□□□ -1.28
USP3-210ENST00000559192 LRIG2O94898 1065 aa7.07□□□□□ -1.28
USP3-210ENST00000559192 MLYCDO95822 493 aa7.07□□□□□ -1.28
USP3-210ENST00000559192 TKTP29401 623 aaKnown RBP7.07□□□□□ -1.28
USP3-210ENST00000559192 S100A3P33764 101 aa7.07□□□□□ -1.28
USP3-210ENST00000559192 CLCQ05315 142 aa7.07□□□□□ -1.28
USP3-210ENST00000559192 TRIM32Q13049 653 aa7.07□□□□□ -1.28
USP3-210ENST00000559192 SLC39A12Q504Y0 691 aa7.07□□□□□ -1.28
USP3-210ENST00000559192 ZNF280DQ6N043 979 aa7.07□□□□□ -1.28
USP3-210ENST00000559192 DCP1BQ8IZD4 617 aaKnown RBP7.07□□□□□ -1.28
USP3-210ENST00000559192 CARNMT1Q8N4J0 409 aa7.07□□□□□ -1.28
USP3-210ENST00000559192 RAB2BQ8WUD1 216 aa7.07□□□□□ -1.28
USP3-210ENST00000559192 COLEC11Q9BWP8 271 aa7.07□□□□□ -1.28
USP3-210ENST00000559192 REEP1Q9H902 201 aa7.07□□□□□ -1.28
USP3-210ENST00000559192 IKZF3Q9UKT9 509 aa7.07□□□□□ -1.28
USP3-210ENST00000559192 EMCNQ9ULC0 261 aa7.07□□□□□ -1.28
USP3-210ENST00000559192 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.07□□□□□ -1.28
USP3-210ENST00000559192 PTGDR2Q9Y5Y4 395 aa7.07□□□□□ -1.28
USP3-210ENST00000559192 CEPT1Q9Y6K0 416 aa7.07□□□□□ -1.28
USP3-210ENST00000559192 K7EPI3 171 aa7.07□□□□□ -1.28
USP3-210ENST00000559192 RECQL5O94762 991 aaPredicted RBP7.07□□□□□ -1.28
USP3-210ENST00000559192 EPN2O95208 641 aa7.07□□□□□ -1.28
USP3-210ENST00000559192 CPOXP36551 454 aa7.07□□□□□ -1.28
USP3-210ENST00000559192 SLC16A1P53985 500 aa7.07□□□□□ -1.28
USP3-210ENST00000559192 DSC2Q02487 901 aa7.07□□□□□ -1.28
USP3-210ENST00000559192 MAD2L1Q13257 205 aaPredicted RBP7.07□□□□□ -1.28
USP3-210ENST00000559192 PTPRNQ16849 979 aa7.07□□□□□ -1.28
USP3-210ENST00000559192 OVOS1Q6IE37 1185 aa7.07□□□□□ -1.28
USP3-210ENST00000559192 TYW3Q6IPR3 259 aaKnown RBP7.07□□□□□ -1.28
USP3-210ENST00000559192 NIPAL1Q6NVV3 410 aa7.07□□□□□ -1.28
USP3-210ENST00000559192 KIAA0408Q6ZU52 694 aa7.07□□□□□ -1.28
USP3-210ENST00000559192 SPATA19Q7Z5L4 167 aa7.07□□□□□ -1.28
USP3-210ENST00000559192 PROX1Q92786 737 aa7.07□□□□□ -1.28
USP3-210ENST00000559192 FCRL2Q96LA5 508 aaPredicted RBP7.07□□□□□ -1.28
USP3-210ENST00000559192 NODALQ96S42 347 aa7.07□□□□□ -1.28
USP3-210ENST00000559192 GAD1Q99259 594 aa7.07□□□□□ -1.28
USP3-210ENST00000559192 SEMA3CQ99985 751 aa7.07□□□□□ -1.28
USP3-210ENST00000559192 PIGVQ9NUD9 493 aa7.07□□□□□ -1.28
USP3-210ENST00000559192 CDC14AQ9UNH5 594 aa7.07□□□□□ -1.28
USP3-210ENST00000559192 PLCL2Q9UPR0 1127 aa7.07□□□□□ -1.28
USP3-210ENST00000559192 IRS2Q9Y4H2 1338 aa7.07□□□□□ -1.28
USP3-210ENST00000559192 VILLO15195 856 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms