RNA–Protein interactions for RNA: ENST00000558545.1

COPS2-204, Transcript of COP9 signalosome subunit 2, humanhuman

TSL 2

Gene COPS2, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS2-204ENST00000558545 SLC38A5Q8WUX1 472 aa4.44□□□□□ -1.7
COPS2-204ENST00000558545 IGSF8Q969P0 613 aa4.44□□□□□ -1.7
COPS2-204ENST00000558545 ZNF524Q96C55 264 aa4.44□□□□□ -1.7
COPS2-204ENST00000558545 LGALS12Q96DT0 336 aa4.44□□□□□ -1.7
COPS2-204ENST00000558545 ST6GAL2Q96JF0 529 aa4.44□□□□□ -1.7
COPS2-204ENST00000558545 HARBI1Q96MB7 349 aa4.44□□□□□ -1.7
COPS2-204ENST00000558545 STRA6Q9BX79 667 aa4.44□□□□□ -1.7
COPS2-204ENST00000558545 FAF1Q9UNN5 650 aaPredicted RBP4.44□□□□□ -1.7
COPS2-204ENST00000558545 CAPN7Q9Y6W3 813 aa4.44□□□□□ -1.7
COPS2-204ENST00000558545 IGLV5-45A0A087WSX0 123 aa4.43□□□□□ -1.7
COPS2-204ENST00000558545 FAM237AA0A1B0GTK4 181 aa4.43□□□□□ -1.7
COPS2-204ENST00000558545 FAM90A26D6RGX4 464 aa4.43□□□□□ -1.7
COPS2-204ENST00000558545 KCNN4O15554 427 aa4.43□□□□□ -1.7
COPS2-204ENST00000558545 PRKNO60260 465 aaPredicted RBP4.43□□□□□ -1.7
COPS2-204ENST00000558545 NR1D1P20393 614 aa4.43□□□□□ -1.7
COPS2-204ENST00000558545 UGT1A1P22309 533 aa4.43□□□□□ -1.7
COPS2-204ENST00000558545 ELF1P32519 619 aa4.43□□□□□ -1.7
COPS2-204ENST00000558545 KRT9P35527 623 aa4.43□□□□□ -1.7
COPS2-204ENST00000558545 CLDN20P56880 219 aa4.43□□□□□ -1.7
COPS2-204ENST00000558545 KRTAP10-12P60413 245 aa4.43□□□□□ -1.7
COPS2-204ENST00000558545 MAD2L1Q13257 205 aaPredicted RBP4.43□□□□□ -1.7
COPS2-204ENST00000558545 OR7E24Q6IFN5 339 aa4.43□□□□□ -1.7
COPS2-204ENST00000558545 LCN10Q6JVE6 187 aa4.43□□□□□ -1.7
COPS2-204ENST00000558545 CDC73Q6P1J9 531 aa4.43□□□□□ -1.7
COPS2-204ENST00000558545 PAPD4Q6PIY7 484 aaKnown RBP4.43□□□□□ -1.7
COPS2-204ENST00000558545 ARMC8Q8IUR7 673 aa4.43□□□□□ -1.7
COPS2-204ENST00000558545 TSPYL6Q8N831 410 aa4.43□□□□□ -1.7
COPS2-204ENST00000558545 DNAAF4Q8WXU2 420 aa4.43□□□□□ -1.7
COPS2-204ENST00000558545 TAF15Q92804 592 aaKnown RBP eCLIP4.43□□□□□ -1.7
COPS2-204ENST00000558545 RRNAD1Q96FB5 475 aaKnown RBP4.43□□□□□ -1.7
COPS2-204ENST00000558545 TMEM68Q96MH6 324 aa4.43□□□□□ -1.7
COPS2-204ENST00000558545 AGXT2Q9BYV1 514 aa4.43□□□□□ -1.7
COPS2-204ENST00000558545 BARHL1Q9BZE3 327 aa4.43□□□□□ -1.7
COPS2-204ENST00000558545 UNC45AQ9H3U1 944 aa4.43□□□□□ -1.7
COPS2-204ENST00000558545 KIF9Q9HAQ2 790 aa4.43□□□□□ -1.7
COPS2-204ENST00000558545 IRAK4Q9NWZ3 460 aa4.43□□□□□ -1.7
COPS2-204ENST00000558545 DDX43Q9NXZ2 648 aaKnown RBP4.43□□□□□ -1.7
COPS2-204ENST00000558545 UBA2Q9UBT2 640 aaPredicted RBP4.43□□□□□ -1.7
COPS2-204ENST00000558545 NAALADL1Q9UQQ1 740 aa4.43□□□□□ -1.7
COPS2-204ENST00000558545 KLHL20Q9Y2M5 609 aa4.43□□□□□ -1.7
COPS2-204ENST00000558545 A6NLC8 198 aa4.42□□□□□ -1.7
COPS2-204ENST00000558545 HS3ST1O14792 307 aa4.42□□□□□ -1.7
COPS2-204ENST00000558545 EIF5BO60841 1220 aaKnown RBP4.42□□□□□ -1.7
COPS2-204ENST00000558545 AHRP35869 848 aa4.42□□□□□ -1.7
COPS2-204ENST00000558545 TUBP50607 506 aa4.42□□□□□ -1.7
COPS2-204ENST00000558545 GEMIN4P57678 1058 aaKnown RBP4.42□□□□□ -1.7
COPS2-204ENST00000558545 ERVK11-1P61568 191 aa4.42□□□□□ -1.7
COPS2-204ENST00000558545 PLIN5Q00G26 463 aa4.42□□□□□ -1.7
COPS2-204ENST00000558545 FAAH2Q6GMR7 532 aa4.42□□□□□ -1.7
COPS2-204ENST00000558545 SLC27A1Q6PCB7 646 aa4.42□□□□□ -1.7
COPS2-204ENST00000558545 PLEKHM3Q6ZWE6 761 aa4.42□□□□□ -1.7
COPS2-204ENST00000558545 GSTA5Q7RTV2 222 aa4.42□□□□□ -1.7
COPS2-204ENST00000558545 OR10V1Q8NGI7 309 aa4.42□□□□□ -1.7
COPS2-204ENST00000558545 OR52I2Q8NH67 350 aa4.42□□□□□ -1.7
COPS2-204ENST00000558545 HMGCLL1Q8TB92 370 aa4.42□□□□□ -1.7
COPS2-204ENST00000558545 LINGO1Q96FE5 620 aa4.42□□□□□ -1.7
COPS2-204ENST00000558545 LITAFQ99732 161 aa4.42□□□□□ -1.7
COPS2-204ENST00000558545 PAIP1Q9H074 479 aaKnown RBP4.42□□□□□ -1.7
COPS2-204ENST00000558545 USP44Q9H0E7 712 aa4.42□□□□□ -1.7
COPS2-204ENST00000558545 MAGIXQ9H6Y5 334 aa4.42□□□□□ -1.7
COPS2-204ENST00000558545 SMC4Q9NTJ3 1288 aa4.42□□□□□ -1.7
COPS2-204ENST00000558545 GREB1LQ9C091 1923 aaPredicted RBP4.42□□□□□ -1.7
COPS2-204ENST00000558545 A0A1W2PP11 408 aa4.41□□□□□ -1.7
COPS2-204ENST00000558545 M0QZ24 198 aa4.41□□□□□ -1.7
COPS2-204ENST00000558545 SNAP23O00161 211 aa4.41□□□□□ -1.7
COPS2-204ENST00000558545 ANKRD28O15084 1053 aa4.41□□□□□ -1.7
COPS2-204ENST00000558545 EIF3DO15371 548 aaKnown RBP eCLIP4.41□□□□□ -1.7
COPS2-204ENST00000558545 PCDH7O60245 1069 aa4.41□□□□□ -1.7
COPS2-204ENST00000558545 PAGE4O60829 102 aa4.41□□□□□ -1.7
COPS2-204ENST00000558545 SEC14L2O76054 403 aa4.41□□□□□ -1.7
COPS2-204ENST00000558545 MBD4O95243 580 aa4.41□□□□□ -1.7
COPS2-204ENST00000558545 ARCN1P48444 511 aaKnown RBP4.41□□□□□ -1.7
COPS2-204ENST00000558545 DCTN2Q13561 401 aaKnown RBP4.41□□□□□ -1.7
COPS2-204ENST00000558545 KRTCAP3Q53RY4 240 aa4.41□□□□□ -1.7
COPS2-204ENST00000558545 CEACAM20Q6UY09 585 aa4.41□□□□□ -1.7
COPS2-204ENST00000558545 HEATR4Q86WZ0 1026 aa4.41□□□□□ -1.7
COPS2-204ENST00000558545 MAP7D3Q8IWC1 876 aa4.41□□□□□ -1.7
COPS2-204ENST00000558545 CCDC13Q8IYE1 715 aa4.41□□□□□ -1.7
COPS2-204ENST00000558545 TAS1R2Q8TE23 839 aa4.41□□□□□ -1.7
COPS2-204ENST00000558545 MAP7D2Q96T17 732 aa4.41□□□□□ -1.7
COPS2-204ENST00000558545 GFRA4Q9GZZ7 299 aa4.41□□□□□ -1.7
COPS2-204ENST00000558545 SIL1Q9H173 461 aa4.41□□□□□ -1.7
COPS2-204ENST00000558545 TFB2MQ9H5Q4 396 aaKnown RBP4.41□□□□□ -1.7
COPS2-204ENST00000558545 UBN1Q9NPG3 1134 aa4.41□□□□□ -1.7
COPS2-204ENST00000558545 TERF2IPQ9NYB0 399 aa4.41□□□□□ -1.7
COPS2-204ENST00000558545 TAS2R10Q9NYW0 307 aa4.41□□□□□ -1.7
COPS2-204ENST00000558545 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.41□□□□□ -1.7
COPS2-204ENST00000558545 MKLN1Q9UL63 735 aa4.41□□□□□ -1.7
COPS2-204ENST00000558545 CAMK2AQ9UQM7 478 aa4.41□□□□□ -1.7
COPS2-204ENST00000558545 TMEM98Q9Y2Y6 226 aa4.41□□□□□ -1.7
COPS2-204ENST00000558545 BLOC1S5-TXNDC5H3BN57 136 aa4.4□□□□□ -1.71
COPS2-204ENST00000558545 CTSVO60911 334 aa4.4□□□□□ -1.71
COPS2-204ENST00000558545 PDE9AO76083 593 aa4.4□□□□□ -1.71
COPS2-204ENST00000558545 AMPHP49418 695 aa4.4□□□□□ -1.71
COPS2-204ENST00000558545 RPL7AP62424 266 aaKnown RBP4.4□□□□□ -1.71
COPS2-204ENST00000558545 MPP1Q00013 466 aa4.4□□□□□ -1.71
COPS2-204ENST00000558545 SIM2Q14190 667 aaPredicted RBP4.4□□□□□ -1.71
COPS2-204ENST00000558545 CCNG2Q16589 344 aa4.4□□□□□ -1.71
COPS2-204ENST00000558545 ZNF876PQ49A33 203 aa4.4□□□□□ -1.71
COPS2-204ENST00000558545 CDONQ4KMG0 1287 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms