RNA–Protein interactions for RNA: ENST00000558376.5

RABGGTA-204, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-204ENST00000558376 XRCC4Q13426 336 aa11.17□□□□□ -0.62
RABGGTA-204ENST00000558376 POLD3Q15054 466 aaPredicted RBP11.17□□□□□ -0.62
RABGGTA-204ENST00000558376 PDK1Q15118 436 aa11.17□□□□□ -0.62
RABGGTA-204ENST00000558376 RNASEH2BQ5TBB1 312 aaKnown RBP11.17□□□□□ -0.62
RABGGTA-204ENST00000558376 LVRNQ6Q4G3 990 aa11.17□□□□□ -0.62
RABGGTA-204ENST00000558376 RD3Q7Z3Z2 195 aa11.17□□□□□ -0.62
RABGGTA-204ENST00000558376 VASH2Q86V25 355 aa11.17□□□□□ -0.62
RABGGTA-204ENST00000558376 OR2W6PQ8NHA6 318 aa11.17□□□□□ -0.62
RABGGTA-204ENST00000558376 CXorf40AQ8TE69 158 aa11.17□□□□□ -0.62
RABGGTA-204ENST00000558376 QKIQ96PU8 341 aaKnown RBP eCLIP11.17□□□□□ -0.62
RABGGTA-204ENST00000558376 OSBPL1AQ9BXW6 950 aa11.17□□□□□ -0.62
RABGGTA-204ENST00000558376 TXLNGYQ9BZA5 131 aa11.17□□□□□ -0.62
RABGGTA-204ENST00000558376 STRADBQ9C0K7 418 aa11.17□□□□□ -0.62
RABGGTA-204ENST00000558376 ETNK1Q9HBU6 452 aa11.17□□□□□ -0.62
RABGGTA-204ENST00000558376 TMEM51Q9NW97 253 aa11.17□□□□□ -0.62
RABGGTA-204ENST00000558376 TMX2-CTNND1H3BSU7 103 aa11.17□□□□□ -0.62
RABGGTA-204ENST00000558376 AGPSO00116 658 aa11.17□□□□□ -0.62
RABGGTA-204ENST00000558376 TOR1BO14657 336 aa11.17□□□□□ -0.62
RABGGTA-204ENST00000558376 NVLO15381 856 aaKnown RBP11.17□□□□□ -0.62
RABGGTA-204ENST00000558376 INSIG1O15503 277 aa11.17□□□□□ -0.62
RABGGTA-204ENST00000558376 SUV39H1O43463 412 aa11.17□□□□□ -0.62
RABGGTA-204ENST00000558376 RHOQP17081 205 aa11.17□□□□□ -0.62
RABGGTA-204ENST00000558376 ITIH1P19827 911 aa11.17□□□□□ -0.62
RABGGTA-204ENST00000558376 CCKBRP32239 447 aa11.17□□□□□ -0.62
RABGGTA-204ENST00000558376 HSPA9P38646 679 aaKnown RBP11.17□□□□□ -0.62
RABGGTA-204ENST00000558376 NRG1Q02297 640 aaPredicted RBP11.17□□□□□ -0.62
RABGGTA-204ENST00000558376 WASHC5Q12768 1159 aa11.17□□□□□ -0.62
RABGGTA-204ENST00000558376 PRKD1Q15139 912 aaPredicted RBP11.17□□□□□ -0.62
RABGGTA-204ENST00000558376 ELOCQ15369 112 aa11.17□□□□□ -0.62
RABGGTA-204ENST00000558376 TBR1Q16650 682 aa11.17□□□□□ -0.62
RABGGTA-204ENST00000558376 TMEM52BQ4KMG9 183 aa11.17□□□□□ -0.62
RABGGTA-204ENST00000558376 COLEC12Q5KU26 742 aa11.17□□□□□ -0.62
RABGGTA-204ENST00000558376 ENPP7Q6UWV6 458 aa11.17□□□□□ -0.62
RABGGTA-204ENST00000558376 ZFAND4Q86XD8 727 aa11.17□□□□□ -0.62
RABGGTA-204ENST00000558376 CDKL3Q8IVW4 592 aaPredicted RBP11.17□□□□□ -0.62
RABGGTA-204ENST00000558376 SFTPA2Q8IWL1 248 aa11.17□□□□□ -0.62
RABGGTA-204ENST00000558376 ARHGAP12Q8IWW6 846 aa11.17□□□□□ -0.62
RABGGTA-204ENST00000558376 Q8N9G6 341 aaPredicted RBP11.17□□□□□ -0.62
RABGGTA-204ENST00000558376 UBLCP1Q8WVY7 318 aaPredicted RBP11.17□□□□□ -0.62
RABGGTA-204ENST00000558376 LRRC45Q96CN5 670 aa11.17□□□□□ -0.62
RABGGTA-204ENST00000558376 MAGEH1Q9H213 219 aa11.17□□□□□ -0.62
RABGGTA-204ENST00000558376 NOL6Q9H6R4 1146 aaKnown RBP11.17□□□□□ -0.62
RABGGTA-204ENST00000558376 RAB6BQ9NRW1 208 aa11.17□□□□□ -0.62
RABGGTA-204ENST00000558376 TMEM248Q9NWD8 314 aa11.17□□□□□ -0.62
RABGGTA-204ENST00000558376 LOXL2Q9Y4K0 774 aa11.17□□□□□ -0.62
RABGGTA-204ENST00000558376 SDK2Q58EX2 2172 aa11.17□□□□□ -0.62
RABGGTA-204ENST00000558376 LRRK2Q5S007 2527 aa11.16□□□□□ -0.62
RABGGTA-204ENST00000558376 PRAMEF33A0A0G2JMD5 474 aa11.16□□□□□ -0.62
RABGGTA-204ENST00000558376 KDELR3O43731 214 aa11.16□□□□□ -0.62
RABGGTA-204ENST00000558376 PRAMEF10O60809 474 aa11.16□□□□□ -0.62
RABGGTA-204ENST00000558376 PPFIA2O75334 1257 aa11.16□□□□□ -0.62
RABGGTA-204ENST00000558376 AVILO75366 819 aa11.16□□□□□ -0.62
RABGGTA-204ENST00000558376 TMCC1O94876 653 aa11.16□□□□□ -0.62
RABGGTA-204ENST00000558376 RASGRP1O95267 797 aa11.16□□□□□ -0.62
RABGGTA-204ENST00000558376 ITGB2P05107 769 aa11.16□□□□□ -0.62
RABGGTA-204ENST00000558376 ALPIP09923 528 aa11.16□□□□□ -0.62
RABGGTA-204ENST00000558376 CTSEP14091 401 aa11.16□□□□□ -0.62
RABGGTA-204ENST00000558376 ETFBP38117 255 aa11.16□□□□□ -0.62
RABGGTA-204ENST00000558376 GARSP41250 739 aaKnown RBP11.16□□□□□ -0.62
RABGGTA-204ENST00000558376 MAPKAPK2P49137 400 aa11.16□□□□□ -0.62
RABGGTA-204ENST00000558376 SRP54P61011 504 aaKnown RBP11.16□□□□□ -0.62
RABGGTA-204ENST00000558376 CYP4F2P78329 520 aa11.16□□□□□ -0.62
RABGGTA-204ENST00000558376 ZFP36L1Q07352 338 aaKnown RBP11.16□□□□□ -0.62
RABGGTA-204ENST00000558376 ANKRD20A2Q5SQ80 823 aa11.16□□□□□ -0.62
RABGGTA-204ENST00000558376 FNBP1LQ5T0N5 605 aa11.16□□□□□ -0.62
RABGGTA-204ENST00000558376 ANKRD20A1Q5TYW2 823 aa11.16□□□□□ -0.62
RABGGTA-204ENST00000558376 ANKRD20A3Q5VUR7 823 aa11.16□□□□□ -0.62
RABGGTA-204ENST00000558376 ATG14Q6ZNE5 492 aa11.16□□□□□ -0.62
RABGGTA-204ENST00000558376 BZW1Q7L1Q6 419 aaKnown RBP11.16□□□□□ -0.62
RABGGTA-204ENST00000558376 TMPRSS9Q7Z410 1059 aa11.16□□□□□ -0.62
RABGGTA-204ENST00000558376 IQCKQ8N0W5 287 aa11.16□□□□□ -0.62
RABGGTA-204ENST00000558376 NAT8LQ8N9F0 302 aa11.16□□□□□ -0.62
RABGGTA-204ENST00000558376 GPR156Q8NFN8 814 aa11.16□□□□□ -0.62
RABGGTA-204ENST00000558376 SCG3Q8WXD2 468 aaKnown RBP11.16□□□□□ -0.62
RABGGTA-204ENST00000558376 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.16□□□□□ -0.62
RABGGTA-204ENST00000558376 RTP4Q96DX8 246 aa11.16□□□□□ -0.62
RABGGTA-204ENST00000558376 TMEM74Q96NL1 305 aa11.16□□□□□ -0.62
RABGGTA-204ENST00000558376 ARHGAP9Q9BRR9 750 aa11.16□□□□□ -0.62
RABGGTA-204ENST00000558376 APOOQ9BUR5 198 aa11.16□□□□□ -0.62
RABGGTA-204ENST00000558376 C1QTNF7Q9BXJ2 289 aa11.16□□□□□ -0.62
RABGGTA-204ENST00000558376 EPB41L4BQ9H329 900 aa11.16□□□□□ -0.62
RABGGTA-204ENST00000558376 CATSPERBQ9H7T0 1116 aa11.16□□□□□ -0.62
RABGGTA-204ENST00000558376 FOXJ2Q9P0K8 574 aa11.16□□□□□ -0.62
RABGGTA-204ENST00000558376 DKK3Q9UBP4 350 aa11.16□□□□□ -0.62
RABGGTA-204ENST00000558376 MTRF1LQ9UGC7 380 aaKnown RBP11.16□□□□□ -0.62
RABGGTA-204ENST00000558376 ZFC3H1O60293 1989 aaKnown RBP11.15□□□□□ -0.62
RABGGTA-204ENST00000558376 TMEM63AO94886 807 aa11.15□□□□□ -0.62
RABGGTA-204ENST00000558376 JCHAINP01591 159 aa11.15□□□□□ -0.62
RABGGTA-204ENST00000558376 JMJD7P0C870 316 aa11.15□□□□□ -0.62
RABGGTA-204ENST00000558376 LIPCP11150 499 aa11.15□□□□□ -0.62
RABGGTA-204ENST00000558376 GRIA1P42261 906 aa11.15□□□□□ -0.62
RABGGTA-204ENST00000558376 PAPOLAP51003 745 aaKnown RBP11.15□□□□□ -0.62
RABGGTA-204ENST00000558376 BLKP51451 505 aa11.15□□□□□ -0.62
RABGGTA-204ENST00000558376 PMS2P54278 862 aa11.15□□□□□ -0.62
RABGGTA-204ENST00000558376 GEMIN4P57678 1058 aaKnown RBP11.15□□□□□ -0.62
RABGGTA-204ENST00000558376 GALNT2Q10471 571 aa11.15□□□□□ -0.62
RABGGTA-204ENST00000558376 ZBTB17Q13105 803 aa11.15□□□□□ -0.62
RABGGTA-204ENST00000558376 NFATC4Q14934 902 aa11.15□□□□□ -0.62
RABGGTA-204ENST00000558376 FASTKD3Q14CZ7 662 aaKnown RBP11.15□□□□□ -0.62
RABGGTA-204ENST00000558376 LRRC14Q15048 493 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms