RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 TROVE2P10155 538 aaKnown RBP eCLIP10.29□□□□□ -0.76
TPM1-212ENST00000558347 AKT2P31751 481 aa10.29□□□□□ -0.76
TPM1-212ENST00000558347 MAGEA6P43360 314 aa10.29□□□□□ -0.76
TPM1-212ENST00000558347 PAPOLAP51003 745 aaKnown RBP10.29□□□□□ -0.76
TPM1-212ENST00000558347 AP1B1Q10567 949 aa10.29□□□□□ -0.76
TPM1-212ENST00000558347 DNAJC3Q13217 504 aa10.29□□□□□ -0.76
TPM1-212ENST00000558347 SLC1A5Q15758 541 aa10.29□□□□□ -0.76
TPM1-212ENST00000558347 LRRC73Q5JTD7 316 aa10.29□□□□□ -0.76
TPM1-212ENST00000558347 FNBP1LQ5T0N5 605 aa10.29□□□□□ -0.76
TPM1-212ENST00000558347 KIAA1161Q6NSJ0 714 aa10.29□□□□□ -0.76
TPM1-212ENST00000558347 GDPD4Q6W3E5 623 aa10.29□□□□□ -0.76
TPM1-212ENST00000558347 ARHGAP36Q6ZRI8 547 aa10.29□□□□□ -0.76
TPM1-212ENST00000558347 PALM2Q8IXS6 379 aa10.29□□□□□ -0.76
TPM1-212ENST00000558347 SLC22A18ASQ8N1D0 253 aa10.29□□□□□ -0.76
TPM1-212ENST00000558347 OXR1Q8N573 874 aa10.29□□□□□ -0.76
TPM1-212ENST00000558347 ATPAF2Q8N5M1 289 aa10.29□□□□□ -0.76
TPM1-212ENST00000558347 EID2Q8N6I1 236 aa10.29□□□□□ -0.76
TPM1-212ENST00000558347 BANPQ8N9N5 519 aa10.29□□□□□ -0.76
TPM1-212ENST00000558347 CCNYQ8ND76 341 aa10.29□□□□□ -0.76
TPM1-212ENST00000558347 FBXO36Q8NEA4 188 aa10.29□□□□□ -0.76
TPM1-212ENST00000558347 GIMAP7Q8NHV1 300 aa10.29□□□□□ -0.76
TPM1-212ENST00000558347 DCAKDQ8WVC6 231 aa10.29□□□□□ -0.76
TPM1-212ENST00000558347 C10orf82Q8WW14 230 aa10.29□□□□□ -0.76
TPM1-212ENST00000558347 ZNF75CPQ92670 426 aaPredicted RBP10.29□□□□□ -0.76
TPM1-212ENST00000558347 FEM1CQ96JP0 617 aa10.29□□□□□ -0.76
TPM1-212ENST00000558347 BMFQ96LC9 184 aa10.29□□□□□ -0.76
TPM1-212ENST00000558347 LRRC37BQ96QE4 947 aa10.29□□□□□ -0.76
TPM1-212ENST00000558347 PAFAH2Q99487 392 aa10.29□□□□□ -0.76
TPM1-212ENST00000558347 PAIP2Q9BPZ3 127 aaKnown RBP10.29□□□□□ -0.76
TPM1-212ENST00000558347 TUBB6Q9BUF5 446 aa10.29□□□□□ -0.76
TPM1-212ENST00000558347 OSBPL1AQ9BXW6 950 aa10.29□□□□□ -0.76
TPM1-212ENST00000558347 NOP53Q9NZM5 478 aaKnown RBP10.29□□□□□ -0.76
TPM1-212ENST00000558347 FTSJ1Q9UET6 329 aa10.29□□□□□ -0.76
TPM1-212ENST00000558347 CFAP47Q6ZTR5 3102 aa10.29□□□□□ -0.76
TPM1-212ENST00000558347 POM121BA6NF01 834 aa10.28□□□□□ -0.76
TPM1-212ENST00000558347 IGLON5A6NGN9 336 aa10.28□□□□□ -0.76
TPM1-212ENST00000558347 TRAFD1O14545 582 aaPredicted RBP10.28□□□□□ -0.76
TPM1-212ENST00000558347 TSPAN6O43657 245 aa10.28□□□□□ -0.76
TPM1-212ENST00000558347 PRAMEF11O60813 436 aa10.28□□□□□ -0.76
TPM1-212ENST00000558347 SDC3O75056 442 aa10.28□□□□□ -0.76
TPM1-212ENST00000558347 PIGNO95427 931 aa10.28□□□□□ -0.76
TPM1-212ENST00000558347 KRT16P08779 473 aa10.28□□□□□ -0.76
TPM1-212ENST00000558347 RPS21P63220 83 aaKnown RBP10.28□□□□□ -0.76
TPM1-212ENST00000558347 SLC18A2Q05940 514 aa10.28□□□□□ -0.76
TPM1-212ENST00000558347 WASHC5Q12768 1159 aa10.28□□□□□ -0.76
TPM1-212ENST00000558347 KCNJ11Q14654 390 aa10.28□□□□□ -0.76
TPM1-212ENST00000558347 SEPT7Q16181 437 aaKnown RBP10.28□□□□□ -0.76
TPM1-212ENST00000558347 INAVAQ3KP66 663 aa10.28□□□□□ -0.76
TPM1-212ENST00000558347 ANKRD22Q5VYY1 191 aa10.28□□□□□ -0.76
TPM1-212ENST00000558347 TIGD7Q6NT04 549 aaPredicted RBP10.28□□□□□ -0.76
TPM1-212ENST00000558347 LVRNQ6Q4G3 990 aa10.28□□□□□ -0.76
TPM1-212ENST00000558347 C3orf62Q6ZUJ4 267 aa10.28□□□□□ -0.76
TPM1-212ENST00000558347 FAM47EQ6ZV65 393 aa10.28□□□□□ -0.76
TPM1-212ENST00000558347 ABI3BPQ7Z7G0 1075 aa10.28□□□□□ -0.76
TPM1-212ENST00000558347 ANKMY2Q8IV38 441 aa10.28□□□□□ -0.76
TPM1-212ENST00000558347 C4orf33Q8N1A6 199 aa10.28□□□□□ -0.76
TPM1-212ENST00000558347 KDF1Q8NAX2 398 aaPredicted RBP10.28□□□□□ -0.76
TPM1-212ENST00000558347 RAB7BQ96AH8 199 aa10.28□□□□□ -0.76
TPM1-212ENST00000558347 CNDP2Q96KP4 475 aaKnown RBP10.28□□□□□ -0.76
TPM1-212ENST00000558347 SPATA13Q96N96 652 aa10.28□□□□□ -0.76
TPM1-212ENST00000558347 KLF6Q99612 283 aaPredicted RBP10.28□□□□□ -0.76
TPM1-212ENST00000558347 MYLK2Q9H1R3 596 aa10.28□□□□□ -0.76
TPM1-212ENST00000558347 UBA2Q9UBT2 640 aaPredicted RBP10.28□□□□□ -0.76
TPM1-212ENST00000558347 TRHDEQ9UKU6 1024 aa10.28□□□□□ -0.76
TPM1-212ENST00000558347 CHKBQ9Y259 395 aa10.28□□□□□ -0.76
TPM1-212ENST00000558347 CACNA1BQ00975 2339 aa10.28□□□□□ -0.76
TPM1-212ENST00000558347 A0A1W2PPM1 405 aa10.28□□□□□ -0.76
TPM1-212ENST00000558347 DFFAO00273 331 aa10.28□□□□□ -0.76
TPM1-212ENST00000558347 AREL1O15033 823 aa10.28□□□□□ -0.76
TPM1-212ENST00000558347 MATN3O15232 486 aa10.28□□□□□ -0.76
TPM1-212ENST00000558347 TMEM63AO94886 807 aa10.28□□□□□ -0.76
TPM1-212ENST00000558347 TGDSO95455 350 aa10.28□□□□□ -0.76
TPM1-212ENST00000558347 LDOC1O95751 146 aaPredicted RBP10.28□□□□□ -0.76
TPM1-212ENST00000558347 DHRS4L1P0CG22 281 aa10.28□□□□□ -0.76
TPM1-212ENST00000558347 KRT4P19013 534 aa10.28□□□□□ -0.76
TPM1-212ENST00000558347 PTPN3P26045 913 aa10.28□□□□□ -0.76
TPM1-212ENST00000558347 RGRP47804 291 aa10.28□□□□□ -0.76
TPM1-212ENST00000558347 CCNG1P51959 295 aa10.28□□□□□ -0.76
TPM1-212ENST00000558347 RAD51Q06609 339 aa10.28□□□□□ -0.76
TPM1-212ENST00000558347 IL10RBQ08334 325 aa10.28□□□□□ -0.76
TPM1-212ENST00000558347 SF3A3Q12874 501 aaKnown RBP eCLIP10.28□□□□□ -0.769e-9■■■■□ 23.4
TPM1-212ENST00000558347 BBS9Q3SYG4 887 aa10.28□□□□□ -0.76
TPM1-212ENST00000558347 MSS51Q4VC12 460 aa10.28□□□□□ -0.76
TPM1-212ENST00000558347 CCDC157Q569K6 752 aa10.28□□□□□ -0.76
TPM1-212ENST00000558347 ANKRD20A2Q5SQ80 823 aa10.28□□□□□ -0.76
TPM1-212ENST00000558347 TPRG1LQ5T0D9 272 aa10.28□□□□□ -0.76
TPM1-212ENST00000558347 ANKRD20A1Q5TYW2 823 aa10.28□□□□□ -0.76
TPM1-212ENST00000558347 ANKRD20A3Q5VUR7 823 aa10.28□□□□□ -0.76
TPM1-212ENST00000558347 TLDC1Q6P9B6 456 aa10.28□□□□□ -0.76
TPM1-212ENST00000558347 Q6ZSR6 202 aa10.28□□□□□ -0.76
TPM1-212ENST00000558347 PTAR1Q7Z6K3 402 aaPredicted RBP10.28□□□□□ -0.76
TPM1-212ENST00000558347 TTC7BQ86TV6 843 aa10.28□□□□□ -0.76
TPM1-212ENST00000558347 MARCH9Q86YJ5 346 aa10.28□□□□□ -0.76
TPM1-212ENST00000558347 LRRN4Q8WUT4 740 aa10.28□□□□□ -0.76
TPM1-212ENST00000558347 SLC44A1Q8WWI5 657 aa10.28□□□□□ -0.76
TPM1-212ENST00000558347 LRRC39Q96DD0 335 aa10.28□□□□□ -0.76
TPM1-212ENST00000558347 IL12RB2Q99665 862 aa10.28□□□□□ -0.76
TPM1-212ENST00000558347 WDR83Q9BRX9 315 aaKnown RBP10.28□□□□□ -0.76
TPM1-212ENST00000558347 C1QTNF2Q9BXJ5 285 aa10.28□□□□□ -0.76
TPM1-212ENST00000558347 CPEB1Q9BZB8 566 aaKnown RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms