RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 TGFB2P61812 414 aa13.9□□□□□ -0.18
SPG11-210ENST00000558319 PCBP2Q15366 365 aaKnown RBP eCLIP13.9□□□□□ -0.18
SPG11-210ENST00000558319 SPOCK2Q92563 424 aa13.9□□□□□ -0.18
SPG11-210ENST00000558319 PPP3R2Q96LZ3 170 aa13.9□□□□□ -0.18
SPG11-210ENST00000558319 HBEGFQ99075 208 aa13.9□□□□□ -0.18
SPG11-210ENST00000558319 FEM1AQ9BSK4 669 aa13.9□□□□□ -0.18
SPG11-210ENST00000558319 PCYOX1Q9UHG3 505 aa13.9□□□□□ -0.18
SPG11-210ENST00000558319 EDF1O60869 148 aaKnown RBP13.9□□□□□ -0.19
SPG11-210ENST00000558319 CPNE3O75131 537 aaKnown RBP13.9□□□□□ -0.19
SPG11-210ENST00000558319 RNASEH2AO75792 299 aaKnown RBP13.9□□□□□ -0.19
SPG11-210ENST00000558319 OR1D2P34982 312 aa13.9□□□□□ -0.19
SPG11-210ENST00000558319 GABRB2P47870 512 aa13.9□□□□□ -0.19
SPG11-210ENST00000558319 SMAD3P84022 425 aaKnown RBP13.9□□□□□ -0.19
SPG11-210ENST00000558319 MAMLD1Q13495 774 aa13.9□□□□□ -0.19
SPG11-210ENST00000558319 TIGD2Q4W5G0 525 aa13.9□□□□□ -0.19
SPG11-210ENST00000558319 C1orf189Q5VU69 101 aa13.9□□□□□ -0.19
SPG11-210ENST00000558319 ZZZ3Q8IYH5 903 aa13.9□□□□□ -0.19
SPG11-210ENST00000558319 GPER1Q99527 375 aa13.9□□□□□ -0.19
SPG11-210ENST00000558319 PTPRJQ12913 1337 aa13.89□□□□□ -0.19
SPG11-210ENST00000558319 NKRFO15226 690 aaKnown RBP eCLIP13.89□□□□□ -0.19
SPG11-210ENST00000558319 ELFN1P0C7U0 828 aa13.89□□□□□ -0.19
SPG11-210ENST00000558319 MAGEA12P43365 314 aa13.89□□□□□ -0.19
SPG11-210ENST00000558319 MYBPC3Q14896 1274 aa13.89□□□□□ -0.19
SPG11-210ENST00000558319 ATP13A5Q4VNC0 1218 aa13.89□□□□□ -0.19
SPG11-210ENST00000558319 AFTPHQ6ULP2 937 aa13.89□□□□□ -0.19
SPG11-210ENST00000558319 PHC3Q8NDX5 983 aa13.89□□□□□ -0.19
SPG11-210ENST00000558319 ARNTL2Q8WYA1 636 aa13.89□□□□□ -0.19
SPG11-210ENST00000558319 IRF2BPLQ9H1B7 796 aa13.89□□□□□ -0.19
SPG11-210ENST00000558319 INTS10Q9NVR2 710 aaKnown RBP13.89□□□□□ -0.19
SPG11-210ENST00000558319 SLC22A3O75751 556 aa13.89□□□□□ -0.19
SPG11-210ENST00000558319 SNX4O95219 450 aa13.89□□□□□ -0.19
SPG11-210ENST00000558319 APOC1P02654 83 aa13.89□□□□□ -0.19
SPG11-210ENST00000558319 ITGB1P05556 798 aa13.89□□□□□ -0.19
SPG11-210ENST00000558319 CD83Q01151 205 aa13.89□□□□□ -0.19
SPG11-210ENST00000558319 SMARCB1Q12824 385 aa13.89□□□□□ -0.19
SPG11-210ENST00000558319 ELAVL2Q12926 359 aaKnown RBP13.89□□□□□ -0.19
SPG11-210ENST00000558319 TOR1AIP1Q5JTV8 583 aa13.89□□□□□ -0.19
SPG11-210ENST00000558319 GLYATQ6IB77 296 aa13.89□□□□□ -0.19
SPG11-210ENST00000558319 ARCQ7LC44 396 aa13.89□□□□□ -0.19
SPG11-210ENST00000558319 THAP5Q7Z6K1 395 aa13.89□□□□□ -0.19
SPG11-210ENST00000558319 OR2L5Q8NG80 312 aa13.89□□□□□ -0.19
SPG11-210ENST00000558319 IL31RAQ8NI17 732 aa13.89□□□□□ -0.19
SPG11-210ENST00000558319 MRPL57Q9BQC6 102 aaKnown RBP13.89□□□□□ -0.19
SPG11-210ENST00000558319 RAB26Q9ULW5 256 aa13.89□□□□□ -0.19
SPG11-210ENST00000558319 CPS1P31327 1500 aa13.89□□□□□ -0.19
SPG11-210ENST00000558319 A0A0A0MRY4 1105 aa13.89□□□□□ -0.19
SPG11-210ENST00000558319 MEA1Q16626 185 aa13.89□□□□□ -0.19
SPG11-210ENST00000558319 OAFQ86UD1 273 aa13.89□□□□□ -0.19
SPG11-210ENST00000558319 GPR180Q86V85 440 aa13.89□□□□□ -0.19
SPG11-210ENST00000558319 SPATA13Q96N96 652 aa13.89□□□□□ -0.19
SPG11-210ENST00000558319 ZNF780BQ9Y6R6 833 aa13.89□□□□□ -0.19
SPG11-210ENST00000558319 TTC24A2A3L6 582 aaPredicted RBP13.89□□□□□ -0.19
SPG11-210ENST00000558319 TRIM64CA6NLI5 447 aa13.89□□□□□ -0.19
SPG11-210ENST00000558319 ACKR2O00590 384 aa13.89□□□□□ -0.19
SPG11-210ENST00000558319 PLIN3O60664 434 aa13.89□□□□□ -0.19
SPG11-210ENST00000558319 PGLSO95336 258 aa13.89□□□□□ -0.19
SPG11-210ENST00000558319 FTH1P02794 183 aa13.89□□□□□ -0.19
SPG11-210ENST00000558319 SP3Q02447 781 aa13.89□□□□□ -0.19
SPG11-210ENST00000558319 FOXM1Q08050 763 aa13.89□□□□□ -0.19
SPG11-210ENST00000558319 SEC23AQ15436 765 aa13.89□□□□□ -0.19
SPG11-210ENST00000558319 RHBDF2Q6PJF5 856 aa13.89□□□□□ -0.19
SPG11-210ENST00000558319 HDAC10Q969S8 669 aa13.89□□□□□ -0.19
SPG11-210ENST00000558319 GPATCH1Q9BRR8 931 aaKnown RBP13.89□□□□□ -0.19
SPG11-210ENST00000558319 DPP7Q9UHL4 492 aa13.89□□□□□ -0.19
SPG11-210ENST00000558319 ADCY10Q96PN6 1610 aa13.89□□□□□ -0.19
SPG11-210ENST00000558319 OR2AG2A6NM03 316 aa13.89□□□□□ -0.19
SPG11-210ENST00000558319 AIREO43918 545 aa13.89□□□□□ -0.19
SPG11-210ENST00000558319 ANGPTL1O95841 491 aa13.89□□□□□ -0.19
SPG11-210ENST00000558319 OR2B6P58173 313 aa13.89□□□□□ -0.19
SPG11-210ENST00000558319 RPL6Q02878 288 aaKnown RBP13.89□□□□□ -0.19
SPG11-210ENST00000558319 CERCAMQ5T4B2 595 aa13.89□□□□□ -0.19
SPG11-210ENST00000558319 GALNT6Q8NCL4 622 aa13.89□□□□□ -0.19
SPG11-210ENST00000558319 LNX1Q8TBB1 728 aaPredicted RBP13.89□□□□□ -0.19
SPG11-210ENST00000558319 TSEN15Q8WW01 171 aaKnown RBP13.89□□□□□ -0.19
SPG11-210ENST00000558319 TRIM43Q96BQ3 446 aaPredicted RBP13.89□□□□□ -0.19
SPG11-210ENST00000558319 VAT1Q99536 393 aa13.89□□□□□ -0.19
SPG11-210ENST00000558319 LPIN3Q9BQK8 851 aa13.89□□□□□ -0.19
SPG11-210ENST00000558319 ATP13A3Q9H7F0 1226 aa13.89□□□□□ -0.19
SPG11-210ENST00000558319 PCDHGC5Q9Y5F6 944 aa13.89□□□□□ -0.19
SPG11-210ENST00000558319 MATN2O00339 956 aa13.88□□□□□ -0.19
SPG11-210ENST00000558319 SAP18O00422 153 aaKnown RBP13.88□□□□□ -0.19
SPG11-210ENST00000558319 AZIN1O14977 448 aa13.88□□□□□ -0.19
SPG11-210ENST00000558319 DNTTP04053 509 aa13.88□□□□□ -0.19
SPG11-210ENST00000558319 RPL17P18621 184 aaKnown RBP13.88□□□□□ -0.19
SPG11-210ENST00000558319 DLK2Q6UY11 383 aa13.88□□□□□ -0.19
SPG11-210ENST00000558319 SH3RF1Q7Z6J0 888 aa13.88□□□□□ -0.19
SPG11-210ENST00000558319 SOCS4Q8WXH5 440 aa13.88□□□□□ -0.19
SPG11-210ENST00000558319 LPGAT1Q92604 370 aa13.88□□□□□ -0.19
SPG11-210ENST00000558319 C11orf16Q9NQ32 467 aa13.88□□□□□ -0.19
SPG11-210ENST00000558319 IKZF2Q9UKS7 526 aa13.88□□□□□ -0.19
SPG11-210ENST00000558319 SMAD9O15198 467 aaKnown RBP13.88□□□□□ -0.19
SPG11-210ENST00000558319 PRKCGP05129 697 aa13.88□□□□□ -0.19
SPG11-210ENST00000558319 SNAPC1Q16533 368 aa13.88□□□□□ -0.19
SPG11-210ENST00000558319 MINDY4Q4G0A6 757 aa13.88□□□□□ -0.19
SPG11-210ENST00000558319 PRELID2Q8N945 189 aa13.88□□□□□ -0.19
SPG11-210ENST00000558319 OR5B17Q8NGF7 314 aa13.88□□□□□ -0.19
SPG11-210ENST00000558319 TNFRSF25Q93038 417 aa13.88□□□□□ -0.19
SPG11-210ENST00000558319 FATE1Q969F0 183 aa13.88□□□□□ -0.19
SPG11-210ENST00000558319 EBPLQ9BY08 206 aa13.88□□□□□ -0.19
SPG11-210ENST00000558319 MRPL9Q9BYD2 267 aaKnown RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms