RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 SERPINB8P50452 374 aa16.73■□□□□ 0.27
SNX1-203ENST00000558040 SLC12A2P55011 1212 aa16.73■□□□□ 0.27
SNX1-203ENST00000558040 POU4F1Q01851 419 aa16.73■□□□□ 0.27
SNX1-203ENST00000558040 LRRC14Q15048 493 aa16.73■□□□□ 0.27
SNX1-203ENST00000558040 TTMPQ5BVD1 217 aa16.73■□□□□ 0.27
SNX1-203ENST00000558040 ZNF789Q5FWF6 425 aa16.73■□□□□ 0.27
SNX1-203ENST00000558040 LDLRAP1Q5SW96 308 aa16.73■□□□□ 0.27
SNX1-203ENST00000558040 FAM45BPQ6NSW5 357 aa16.73■□□□□ 0.27
SNX1-203ENST00000558040 TIFABQ6ZNK6 161 aa16.73■□□□□ 0.27
SNX1-203ENST00000558040 TRABD2AQ86V40 505 aa16.73■□□□□ 0.27
SNX1-203ENST00000558040 PHYKPLQ8IUZ5 450 aa16.73■□□□□ 0.27
SNX1-203ENST00000558040 DCLK2Q8N568 766 aa16.73■□□□□ 0.27
SNX1-203ENST00000558040 GDAP1Q8TB36 358 aa16.73■□□□□ 0.27
SNX1-203ENST00000558040 FAM45AQ8TCE6 357 aa16.73■□□□□ 0.27
SNX1-203ENST00000558040 BTN2A2Q8WVV5 523 aa16.73■□□□□ 0.27
SNX1-203ENST00000558040 GLYATL1Q969I3 302 aa16.73■□□□□ 0.27
SNX1-203ENST00000558040 TLCD1Q96CP7 247 aa16.73■□□□□ 0.27
SNX1-203ENST00000558040 TSPAN17Q96FV3 270 aa16.73■□□□□ 0.27
SNX1-203ENST00000558040 DCUN1D1Q96GG9 259 aa16.73■□□□□ 0.27
SNX1-203ENST00000558040 ELMO2Q96JJ3 720 aa16.73■□□□□ 0.27
SNX1-203ENST00000558040 CLPBQ9H078 707 aa16.73■□□□□ 0.27
SNX1-203ENST00000558040 CD93Q9NPY3 652 aa16.73■□□□□ 0.27
SNX1-203ENST00000558040 DLGAP2Q9P1A6 1054 aa16.73■□□□□ 0.27
SNX1-203ENST00000558040 CRYL1Q9Y2S2 319 aa16.73■□□□□ 0.27
SNX1-203ENST00000558040 MTO1Q9Y2Z2 717 aaKnown RBP16.73■□□□□ 0.27
SNX1-203ENST00000558040 PCDHB1Q9Y5F3 818 aa16.73■□□□□ 0.27
SNX1-203ENST00000558040 ACTL7BQ9Y614 415 aa16.73■□□□□ 0.27
SNX1-203ENST00000558040 FADS2P1A8MWK0 482 aa16.72■□□□□ 0.27
SNX1-203ENST00000558040 F8W8V4 182 aa16.72■□□□□ 0.27
SNX1-203ENST00000558040 H3BMM5 538 aa16.72■□□□□ 0.27
SNX1-203ENST00000558040 PRMT5O14744 637 aaPredicted RBP16.72■□□□□ 0.27
SNX1-203ENST00000558040 ESR1P03372 595 aa16.72■□□□□ 0.27
SNX1-203ENST00000558040 RPS3P23396 243 aaKnown RBP eCLIP16.72■□□□□ 0.27
SNX1-203ENST00000558040 TEAD1P28347 426 aa16.72■□□□□ 0.27
SNX1-203ENST00000558040 AKT1P31749 480 aa16.72■□□□□ 0.27
SNX1-203ENST00000558040 NSG1P42857 185 aa16.72■□□□□ 0.27
SNX1-203ENST00000558040 ABCG1P45844 678 aa16.72■□□□□ 0.27
SNX1-203ENST00000558040 MAGOHP61326 146 aaKnown RBP16.72■□□□□ 0.27
SNX1-203ENST00000558040 USP10Q14694 798 aaKnown RBP16.72■□□□□ 0.27
SNX1-203ENST00000558040 GPRC6AQ5T6X5 926 aa16.72■□□□□ 0.27
SNX1-203ENST00000558040 KCTD16Q68DU8 428 aa16.72■□□□□ 0.27
SNX1-203ENST00000558040 SRRM1Q8IYB3 904 aaKnown RBP16.72■□□□□ 0.27
SNX1-203ENST00000558040 DDHD1Q8NEL9 900 aa16.72■□□□□ 0.27
SNX1-203ENST00000558040 ACMSDQ8TDX5 336 aa16.72■□□□□ 0.27
SNX1-203ENST00000558040 MZB1Q8WU39 189 aa16.72■□□□□ 0.27
SNX1-203ENST00000558040 TOE1Q96GM8 510 aaKnown RBP16.72■□□□□ 0.27
SNX1-203ENST00000558040 SPACA7Q96KW9 195 aa16.72■□□□□ 0.27
SNX1-203ENST00000558040 SMC6Q96SB8 1091 aa16.72■□□□□ 0.27
SNX1-203ENST00000558040 TPSD1Q9BZJ3 242 aa16.72■□□□□ 0.27
SNX1-203ENST00000558040 ZCCHC2Q9C0B9 1178 aaKnown RBP16.72■□□□□ 0.27
SNX1-203ENST00000558040 SPATA6Q9NWH7 488 aaPredicted RBP16.72■□□□□ 0.27
SNX1-203ENST00000558040 WSB2Q9NYS7 404 aaPredicted RBP16.72■□□□□ 0.27
SNX1-203ENST00000558040 GNPTGQ9UJJ9 305 aa16.72■□□□□ 0.27
SNX1-203ENST00000558040 SLC39A10Q9ULF5 831 aa16.72■□□□□ 0.27
SNX1-203ENST00000558040 LRRK1Q38SD2 2015 aa16.72■□□□□ 0.27
SNX1-203ENST00000558040 IGLV3-16A0A075B6K0 115 aa16.71■□□□□ 0.27
SNX1-203ENST00000558040 HMX2A2RU54 273 aa16.71■□□□□ 0.27
SNX1-203ENST00000558040 SLC25A14O95258 325 aaPredicted RBP16.71■□□□□ 0.27
SNX1-203ENST00000558040 PAK4O96013 591 aaPredicted RBP16.71■□□□□ 0.27
SNX1-203ENST00000558040 PCCBP05166 539 aa16.71■□□□□ 0.27
SNX1-203ENST00000558040 PKMP14618 531 aaKnown RBP16.71■□□□□ 0.27
SNX1-203ENST00000558040 MSH3P20585 1137 aa16.71■□□□□ 0.27
SNX1-203ENST00000558040 TYK2P29597 1187 aa16.71■□□□□ 0.27
SNX1-203ENST00000558040 FMO4P31512 558 aa16.71■□□□□ 0.27
SNX1-203ENST00000558040 NUDT1P36639 197 aa16.71■□□□□ 0.27
SNX1-203ENST00000558040 CCR5P51681 352 aa16.71■□□□□ 0.27
SNX1-203ENST00000558040 PPP2CBP62714 309 aa16.71■□□□□ 0.27
SNX1-203ENST00000558040 PPP2CAP67775 309 aa16.71■□□□□ 0.27
SNX1-203ENST00000558040 WSCD2Q2TBF2 565 aa16.71■□□□□ 0.27
SNX1-203ENST00000558040 HECTD2Q5U5R9 776 aa16.71■□□□□ 0.27
SNX1-203ENST00000558040 PNCKQ6P2M8 343 aa16.71■□□□□ 0.27
SNX1-203ENST00000558040 ADAMTSL4Q6UY14 1074 aa16.71■□□□□ 0.27
SNX1-203ENST00000558040 DENND6BQ8NEG7 585 aa16.71■□□□□ 0.27
SNX1-203ENST00000558040 ISL2Q96A47 359 aa16.71■□□□□ 0.27
SNX1-203ENST00000558040 ALKBH8Q96BT7 664 aaKnown RBP16.71■□□□□ 0.27
SNX1-203ENST00000558040 CABS1Q96KC9 395 aa16.71■□□□□ 0.27
SNX1-203ENST00000558040 AARSD1Q9BTE6 412 aaKnown RBP16.71■□□□□ 0.27
SNX1-203ENST00000558040 IGHV1OR15-9A0A0B4J2B8 117 aa16.7■□□□□ 0.26
SNX1-203ENST00000558040 H3BQF6 201 aa16.7■□□□□ 0.26
SNX1-203ENST00000558040 K7ESF4 209 aa16.7■□□□□ 0.26
SNX1-203ENST00000558040 QSOX1O00391 747 aa16.7■□□□□ 0.26
SNX1-203ENST00000558040 TPP1O14773 563 aa16.7■□□□□ 0.26
SNX1-203ENST00000558040 AXIN1O15169 862 aa16.7■□□□□ 0.26
SNX1-203ENST00000558040 PI15O43692 258 aa16.7■□□□□ 0.26
SNX1-203ENST00000558040 OR1I1O60431 355 aa16.7■□□□□ 0.26
SNX1-203ENST00000558040 NDUFS2O75306 463 aa16.7■□□□□ 0.26
SNX1-203ENST00000558040 SOD1P00441 154 aa16.7■□□□□ 0.26
SNX1-203ENST00000558040 ALDOAP04075 364 aaKnown RBP16.7■□□□□ 0.26
SNX1-203ENST00000558040 MPOP05164 745 aa16.7■□□□□ 0.26
SNX1-203ENST00000558040 STMN1P16949 149 aa16.7■□□□□ 0.26
SNX1-203ENST00000558040 SAT1P21673 171 aa16.7■□□□□ 0.26
SNX1-203ENST00000558040 CRABP2P29373 138 aa16.7■□□□□ 0.26
SNX1-203ENST00000558040 MAT2AP31153 395 aaKnown RBP16.7■□□□□ 0.26
SNX1-203ENST00000558040 HOXA6P31267 233 aa16.7■□□□□ 0.26
SNX1-203ENST00000558040 FGL2Q14314 439 aa16.7■□□□□ 0.26
SNX1-203ENST00000558040 IRF4Q15306 451 aa16.7■□□□□ 0.26
SNX1-203ENST00000558040 TAF1BQ53T94 588 aaPredicted RBP16.7■□□□□ 0.26
SNX1-203ENST00000558040 TMEM31Q5JXX7 168 aa16.7■□□□□ 0.26
SNX1-203ENST00000558040 RBM20Q5T481 1227 aaKnown RBP16.7■□□□□ 0.26
SNX1-203ENST00000558040 KIAA0895LQ68EN5 471 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms