RNA–Protein interactions for RNA: ENST00000557685.5

EFCAB11-213, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 3

Gene EFCAB11, Length 698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-213ENST00000557685 CLEC18AA5D8T8 446 aa4.32□□□□□ -1.72
EFCAB11-213ENST00000557685 FAM90A10PA6NDY2 464 aa4.32□□□□□ -1.72
EFCAB11-213ENST00000557685 EIF4E1BA6NMX2 242 aaKnown RBP4.32□□□□□ -1.72
EFCAB11-213ENST00000557685 GH2P01242 217 aa4.32□□□□□ -1.72
EFCAB11-213ENST00000557685 IGHV4-30-4P0DP06 118 aa4.32□□□□□ -1.72
EFCAB11-213ENST00000557685 UGT1A1P22309 533 aa4.32□□□□□ -1.72
EFCAB11-213ENST00000557685 CLCNKAP51800 687 aa4.32□□□□□ -1.72
EFCAB11-213ENST00000557685 GRAPQ13588 217 aa4.32□□□□□ -1.72
EFCAB11-213ENST00000557685 DLG2Q15700 870 aa4.32□□□□□ -1.72
EFCAB11-213ENST00000557685 IGSF11Q5DX21 431 aa4.32□□□□□ -1.72
EFCAB11-213ENST00000557685 NSUN5P2Q63ZY6 315 aa4.32□□□□□ -1.72
EFCAB11-213ENST00000557685 MINDY1Q8N5J2 469 aa4.32□□□□□ -1.72
EFCAB11-213ENST00000557685 PCDH20Q8N6Y1 951 aaKnown RBP4.32□□□□□ -1.72
EFCAB11-213ENST00000557685 POMGNT2Q8NAT1 580 aa4.32□□□□□ -1.72
EFCAB11-213ENST00000557685 CLEC18CQ8NCF0 446 aa4.32□□□□□ -1.72
EFCAB11-213ENST00000557685 MCUQ8NE86 351 aa4.32□□□□□ -1.72
EFCAB11-213ENST00000557685 PTPMT1Q8WUK0 201 aaPredicted RBP4.32□□□□□ -1.72
EFCAB11-213ENST00000557685 DNAAF4Q8WXU2 420 aa4.32□□□□□ -1.72
EFCAB11-213ENST00000557685 RHBDF1Q96CC6 855 aa4.32□□□□□ -1.72
EFCAB11-213ENST00000557685 TMCO6Q96DC7 493 aa4.32□□□□□ -1.72
EFCAB11-213ENST00000557685 CEP295NLQ96MC4 621 aa4.32□□□□□ -1.72
EFCAB11-213ENST00000557685 PAFAH2Q99487 392 aa4.32□□□□□ -1.72
EFCAB11-213ENST00000557685 NTPCRQ9BSD7 190 aaKnown RBP4.32□□□□□ -1.72
EFCAB11-213ENST00000557685 APOL6Q9BWW8 343 aa4.32□□□□□ -1.72
EFCAB11-213ENST00000557685 MRPL44Q9H9J2 332 aaKnown RBP4.32□□□□□ -1.72
EFCAB11-213ENST00000557685 MCM9Q9NXL9 1143 aa4.32□□□□□ -1.72
EFCAB11-213ENST00000557685 CPSF2Q9P2I0 782 aaKnown RBP4.32□□□□□ -1.72
EFCAB11-213ENST00000557685 RNF7Q9UBF6 113 aa4.32□□□□□ -1.72
EFCAB11-213ENST00000557685 LOXL2Q9Y4K0 774 aa4.32□□□□□ -1.72
EFCAB11-213ENST00000557685 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.32□□□□□ -1.72
EFCAB11-213ENST00000557685 TRIP12Q14669 1992 aaPredicted RBP4.31□□□□□ -1.72
EFCAB11-213ENST00000557685 LNP1A1A4G5 178 aa4.31□□□□□ -1.72
EFCAB11-213ENST00000557685 TMEM8BA6NDV4 472 aa4.31□□□□□ -1.72
EFCAB11-213ENST00000557685 HS3ST1O14792 307 aa4.31□□□□□ -1.72
EFCAB11-213ENST00000557685 DDNO94850 711 aaPredicted RBP4.31□□□□□ -1.72
EFCAB11-213ENST00000557685 PRLRP16471 622 aa4.31□□□□□ -1.72
EFCAB11-213ENST00000557685 SSTR2P30874 369 aa4.31□□□□□ -1.72
EFCAB11-213ENST00000557685 LIG4P49917 911 aa4.31□□□□□ -1.72
EFCAB11-213ENST00000557685 SPOCK1Q08629 439 aa4.31□□□□□ -1.72
EFCAB11-213ENST00000557685 AIMP1Q12904 312 aaKnown RBP4.31□□□□□ -1.72
EFCAB11-213ENST00000557685 TRAF3Q13114 568 aa4.31□□□□□ -1.72
EFCAB11-213ENST00000557685 PLCB4Q15147 1175 aa4.31□□□□□ -1.72
EFCAB11-213ENST00000557685 RASA2Q15283 850 aa4.31□□□□□ -1.72
EFCAB11-213ENST00000557685 OASLQ15646 514 aaKnown RBP4.31□□□□□ -1.72
EFCAB11-213ENST00000557685 TMEM266Q2M3C6 531 aa4.31□□□□□ -1.72
EFCAB11-213ENST00000557685 MYLK3Q32MK0 819 aa4.31□□□□□ -1.72
EFCAB11-213ENST00000557685 ATP13A5Q4VNC0 1218 aa4.31□□□□□ -1.72
EFCAB11-213ENST00000557685 PAPPA-AS1Q5QFB9 102 aa4.31□□□□□ -1.72
EFCAB11-213ENST00000557685 C18orf63Q68DL7 685 aa4.31□□□□□ -1.72
EFCAB11-213ENST00000557685 ZNF280DQ6N043 979 aa4.31□□□□□ -1.72
EFCAB11-213ENST00000557685 RPUSD3Q6P087 351 aaKnown RBP4.31□□□□□ -1.72
EFCAB11-213ENST00000557685 FAM122CQ6P4D5 195 aa4.31□□□□□ -1.72
EFCAB11-213ENST00000557685 WDR73Q6P4I2 378 aa4.31□□□□□ -1.72
EFCAB11-213ENST00000557685 PDXDC1Q6P996 788 aa4.31□□□□□ -1.72
EFCAB11-213ENST00000557685 ZNF549Q6P9A3 640 aa4.31□□□□□ -1.72
EFCAB11-213ENST00000557685 PAPD4Q6PIY7 484 aaKnown RBP4.31□□□□□ -1.72
EFCAB11-213ENST00000557685 BRAT1Q6PJG6 821 aa4.31□□□□□ -1.72
EFCAB11-213ENST00000557685 TPRG1Q6ZUI0 275 aa4.31□□□□□ -1.72
EFCAB11-213ENST00000557685 CCDC190Q86UF4 302 aa4.31□□□□□ -1.72
EFCAB11-213ENST00000557685 AACSQ86V21 672 aa4.31□□□□□ -1.72
EFCAB11-213ENST00000557685 FJX1Q86VR8 437 aa4.31□□□□□ -1.72
EFCAB11-213ENST00000557685 RASGEF1CQ8N431 466 aa4.31□□□□□ -1.72
EFCAB11-213ENST00000557685 KCTD6Q8NC69 237 aa4.31□□□□□ -1.72
EFCAB11-213ENST00000557685 CCDC191Q8NCU4 936 aa4.31□□□□□ -1.72
EFCAB11-213ENST00000557685 GSDMBQ8TAX9 411 aa4.31□□□□□ -1.72
EFCAB11-213ENST00000557685 CAMK1GQ96NX5 476 aa4.31□□□□□ -1.72
EFCAB11-213ENST00000557685 ABHD1Q96SE0 405 aa4.31□□□□□ -1.72
EFCAB11-213ENST00000557685 RTN4RQ9BZR6 473 aa4.31□□□□□ -1.72
EFCAB11-213ENST00000557685 SPRY4Q9C004 299 aa4.31□□□□□ -1.72
EFCAB11-213ENST00000557685 KLHL4Q9C0H6 718 aa4.31□□□□□ -1.72
EFCAB11-213ENST00000557685 NOX4Q9NPH5 578 aa4.31□□□□□ -1.72
EFCAB11-213ENST00000557685 NFKBIL1Q9UBC1 381 aaPredicted RBP4.31□□□□□ -1.72
EFCAB11-213ENST00000557685 PPIEQ9UNP9 301 aaKnown RBP4.31□□□□□ -1.72
EFCAB11-213ENST00000557685 TMEM184BQ9Y519 407 aaPredicted RBP4.31□□□□□ -1.72
EFCAB11-213ENST00000557685 LOC102723996A0A087X1L8 192 aa4.3□□□□□ -1.72
EFCAB11-213ENST00000557685 GPR75-ASB3A0A0A6YYF3 556 aa4.3□□□□□ -1.72
EFCAB11-213ENST00000557685 hCG_1809904A0A1W2PP81 198 aa4.3□□□□□ -1.72
EFCAB11-213ENST00000557685 A0A1W2PPE2 198 aa4.3□□□□□ -1.72
EFCAB11-213ENST00000557685 A0A1W2PR64 198 aa4.3□□□□□ -1.72
EFCAB11-213ENST00000557685 LINC01553A4QN01 128 aa4.3□□□□□ -1.72
EFCAB11-213ENST00000557685 FAM90A26D6RGX4 464 aa4.3□□□□□ -1.72
EFCAB11-213ENST00000557685 DKC1O60832 514 aaKnown RBP eCLIP4.3□□□□□ -1.72
EFCAB11-213ENST00000557685 RFPL2O75678 378 aa4.3□□□□□ -1.72
EFCAB11-213ENST00000557685 RSL1D1O76021 490 aaKnown RBP4.3□□□□□ -1.72
EFCAB11-213ENST00000557685 KCNK5O95279 499 aa4.3□□□□□ -1.72
EFCAB11-213ENST00000557685 PRSS2P07478 247 aa4.3□□□□□ -1.72
EFCAB11-213ENST00000557685 PEX5P50542 639 aa4.3□□□□□ -1.72
EFCAB11-213ENST00000557685 ARSEP51690 589 aa4.3□□□□□ -1.72
EFCAB11-213ENST00000557685 TAS2R38P59533 333 aa4.3□□□□□ -1.72
EFCAB11-213ENST00000557685 TMF1P82094 1093 aa4.3□□□□□ -1.72
EFCAB11-213ENST00000557685 BNC1Q01954 994 aa4.3□□□□□ -1.72
EFCAB11-213ENST00000557685 DHX34Q14147 1143 aaKnown RBP4.3□□□□□ -1.72
EFCAB11-213ENST00000557685 HLFQ16534 295 aa4.3□□□□□ -1.72
EFCAB11-213ENST00000557685 SYT16Q17RD7 645 aa4.3□□□□□ -1.72
EFCAB11-213ENST00000557685 ZNF260Q3ZCT1 412 aa4.3□□□□□ -1.72
EFCAB11-213ENST00000557685 XKR9Q5GH70 373 aa4.3□□□□□ -1.72
EFCAB11-213ENST00000557685 KCNT1Q5JUK3 1230 aa4.3□□□□□ -1.72
EFCAB11-213ENST00000557685 LRCH2Q5VUJ6 765 aa4.3□□□□□ -1.72
EFCAB11-213ENST00000557685 AWAT2Q6E213 333 aa4.3□□□□□ -1.72
EFCAB11-213ENST00000557685 RGMBQ6NW40 437 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms