RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 TUBB4BP68371 445 aa15.15■□□□□ 0.02
NEDD1-213ENST00000557644 IRX4P78413 519 aa15.15■□□□□ 0.02
NEDD1-213ENST00000557644 SEMA3AQ14563 771 aa15.15■□□□□ 0.02
NEDD1-213ENST00000557644 NFATC4Q14934 902 aa15.15■□□□□ 0.02
NEDD1-213ENST00000557644 ZNF542PQ5EBM4 170 aa15.15■□□□□ 0.02
NEDD1-213ENST00000557644 PLA2G2CQ5R387 149 aa15.15■□□□□ 0.02
NEDD1-213ENST00000557644 UBAP2Q5T6F2 1119 aaKnown RBP15.15■□□□□ 0.02
NEDD1-213ENST00000557644 ARMC3Q5W041 872 aa15.15■□□□□ 0.02
NEDD1-213ENST00000557644 TAS2R42Q7RTR8 314 aa15.15■□□□□ 0.02
NEDD1-213ENST00000557644 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.15■□□□□ 0.02
NEDD1-213ENST00000557644 GDAP1Q8TB36 358 aa15.15■□□□□ 0.02
NEDD1-213ENST00000557644 DTX3LQ8TDB6 740 aa15.15■□□□□ 0.02
NEDD1-213ENST00000557644 NAT9Q9BTE0 207 aa15.15■□□□□ 0.02
NEDD1-213ENST00000557644 FOXP3Q9BZS1 431 aa15.15■□□□□ 0.02
NEDD1-213ENST00000557644 ZNF106Q9H2Y7 1883 aaKnown RBP15.15■□□□□ 0.02
NEDD1-213ENST00000557644 CAPN10Q9HC96 672 aa15.15■□□□□ 0.02
NEDD1-213ENST00000557644 MRPL40Q9NQ50 206 aaKnown RBP15.15■□□□□ 0.02
NEDD1-213ENST00000557644 PHPT1Q9NRX4 125 aaPredicted RBP15.15■□□□□ 0.02
NEDD1-213ENST00000557644 CRLS1Q9UJA2 301 aa15.15■□□□□ 0.02
NEDD1-213ENST00000557644 SNX11Q9Y5W9 270 aa15.15■□□□□ 0.02
NEDD1-213ENST00000557644 FAM169AQ9Y6X4 670 aa15.15■□□□□ 0.02
NEDD1-213ENST00000557644 AGAP14A8MT82 685 aa15.14■□□□□ 0.01
NEDD1-213ENST00000557644 CACNB4O00305 520 aaPredicted RBP15.14■□□□□ 0.01
NEDD1-213ENST00000557644 PYGLP06737 847 aa15.14■□□□□ 0.01
NEDD1-213ENST00000557644 SSTR1P30872 391 aa15.14■□□□□ 0.01
NEDD1-213ENST00000557644 C21orf59P57076 290 aa15.14■□□□□ 0.01
NEDD1-213ENST00000557644 NXPH1P58417 271 aa15.14■□□□□ 0.01
NEDD1-213ENST00000557644 CACNG1Q06432 222 aa15.14■□□□□ 0.01
NEDD1-213ENST00000557644 OVGP1Q12889 678 aa15.14■□□□□ 0.01
NEDD1-213ENST00000557644 FZD2Q14332 565 aa15.14■□□□□ 0.01
NEDD1-213ENST00000557644 TEAD4Q15561 434 aa15.14■□□□□ 0.01
NEDD1-213ENST00000557644 GPRC6AQ5T6X5 926 aa15.14■□□□□ 0.01
NEDD1-213ENST00000557644 PDPK2PQ6A1A2 396 aa15.14■□□□□ 0.01
NEDD1-213ENST00000557644 TRMT10BQ6PF06 316 aaKnown RBP15.14■□□□□ 0.01
NEDD1-213ENST00000557644 ENPP7Q6UWV6 458 aa15.14■□□□□ 0.01
NEDD1-213ENST00000557644 VPS35Q96QK1 796 aa15.14■□□□□ 0.01
NEDD1-213ENST00000557644 PHACTR1Q9C0D0 580 aa15.14■□□□□ 0.01
NEDD1-213ENST00000557644 C20orf96Q9NUD7 363 aaPredicted RBP15.14■□□□□ 0.01
NEDD1-213ENST00000557644 GMEB2Q9UKD1 530 aa15.14■□□□□ 0.01
NEDD1-213ENST00000557644 SPTY2D1-AS1A0A0U1RR47 76 aa15.14■□□□□ 0.01
NEDD1-213ENST00000557644 SCAMP1O15126 338 aa15.14■□□□□ 0.01
NEDD1-213ENST00000557644 TTC4O95801 387 aa15.14■□□□□ 0.01
NEDD1-213ENST00000557644 FUCA1P04066 466 aa15.14■□□□□ 0.01
NEDD1-213ENST00000557644 ERVK-10P10266 1014 aa15.14■□□□□ 0.01
NEDD1-213ENST00000557644 PAMP19021 973 aa15.14■□□□□ 0.01
NEDD1-213ENST00000557644 SPEM2Q0P670 501 aa15.14■□□□□ 0.01
NEDD1-213ENST00000557644 STEAP4Q687X5 459 aa15.14■□□□□ 0.01
NEDD1-213ENST00000557644 SLC23A3Q6PIS1 610 aa15.14■□□□□ 0.01
NEDD1-213ENST00000557644 SERPINA9Q86WD7 417 aa15.14■□□□□ 0.01
NEDD1-213ENST00000557644 PHYKPLQ8IUZ5 450 aa15.14■□□□□ 0.01
NEDD1-213ENST00000557644 CCNJLQ8IV13 435 aa15.14■□□□□ 0.01
NEDD1-213ENST00000557644 NXPE1Q8N323 547 aa15.14■□□□□ 0.01
NEDD1-213ENST00000557644 DCLK2Q8N568 766 aa15.14■□□□□ 0.01
NEDD1-213ENST00000557644 CEP76Q8TAP6 659 aa15.14■□□□□ 0.01
NEDD1-213ENST00000557644 FGF22Q9HCT0 170 aa15.14■□□□□ 0.01
NEDD1-213ENST00000557644 CATSPERZQ9NTU4 200 aa15.14■□□□□ 0.01
NEDD1-213ENST00000557644 SMOXQ9NWM0 555 aa15.14■□□□□ 0.01
NEDD1-213ENST00000557644 KLF15Q9UIH9 416 aa15.14■□□□□ 0.01
NEDD1-213ENST00000557644 PCYT1BQ9Y5K3 369 aaPredicted RBP15.14■□□□□ 0.01
NEDD1-213ENST00000557644 TRBV5-4A0A0C4DH59 114 aa15.13■□□□□ 0.01
NEDD1-213ENST00000557644 CD3EAPO15446 510 aaKnown RBP15.13■□□□□ 0.01
NEDD1-213ENST00000557644 DPP6P42658 865 aa15.13■□□□□ 0.01
NEDD1-213ENST00000557644 KIAA1024LP59773 190 aa15.13■□□□□ 0.01
NEDD1-213ENST00000557644 GPX6P59796 221 aa15.13■□□□□ 0.01
NEDD1-213ENST00000557644 GRIK2Q13002 908 aa15.13■□□□□ 0.01
NEDD1-213ENST00000557644 LONRF1Q17RB8 773 aa15.13■□□□□ 0.01
NEDD1-213ENST00000557644 SPANXN3Q5MJ09 141 aa15.13■□□□□ 0.01
NEDD1-213ENST00000557644 CCNI2Q6ZMN8 369 aaPredicted RBP15.13■□□□□ 0.01
NEDD1-213ENST00000557644 MARK2Q7KZI7 788 aaKnown RBP15.13■□□□□ 0.01
NEDD1-213ENST00000557644 PALM2Q8IXS6 379 aa15.13■□□□□ 0.01
NEDD1-213ENST00000557644 FAM174AQ8TBP5 190 aa15.13■□□□□ 0.01
NEDD1-213ENST00000557644 TSACCQ96A04 125 aaPredicted RBP15.13■□□□□ 0.01
NEDD1-213ENST00000557644 PDXPQ96GD0 296 aa15.13■□□□□ 0.01
NEDD1-213ENST00000557644 BOCQ9BWV1 1114 aa15.13■□□□□ 0.01
NEDD1-213ENST00000557644 OR2AG1Q9H205 316 aa15.13■□□□□ 0.01
NEDD1-213ENST00000557644 LRRC4CQ9HCJ2 640 aa15.13■□□□□ 0.01
NEDD1-213ENST00000557644 NCDNQ9UBB6 729 aa15.13■□□□□ 0.01
NEDD1-213ENST00000557644 PROB1E7EW31 1015 aa15.13■□□□□ 0.01
NEDD1-213ENST00000557644 PIAS1O75925 651 aa15.13■□□□□ 0.01
NEDD1-213ENST00000557644 ASMTLO95671 621 aa15.13■□□□□ 0.01
NEDD1-213ENST00000557644 CEACAM5P06731 702 aa15.13■□□□□ 0.01
NEDD1-213ENST00000557644 HOXC4P09017 264 aaPredicted RBP15.13■□□□□ 0.01
NEDD1-213ENST00000557644 ACRV1P26436 265 aa15.13■□□□□ 0.01
NEDD1-213ENST00000557644 HTR1BP28222 390 aa15.13■□□□□ 0.01
NEDD1-213ENST00000557644 EIF2B5Q13144 721 aaKnown RBP15.13■□□□□ 0.01
NEDD1-213ENST00000557644 SF3A2Q15428 464 aaKnown RBP15.13■□□□□ 0.01
NEDD1-213ENST00000557644 DBN1Q16643 649 aa15.13■□□□□ 0.01
NEDD1-213ENST00000557644 GPR33Q49SQ1 333 aa15.13■□□□□ 0.01
NEDD1-213ENST00000557644 FASTKD1Q53R41 847 aaKnown RBP15.13■□□□□ 0.01
NEDD1-213ENST00000557644 HSP90AA5PQ58FG0 334 aa15.13■□□□□ 0.01
NEDD1-213ENST00000557644 MACC1Q6ZN28 852 aa15.13■□□□□ 0.01
NEDD1-213ENST00000557644 ADGRG6Q86SQ4 1221 aa15.13■□□□□ 0.01
NEDD1-213ENST00000557644 OTUD6BQ8N6M0 293 aa15.13■□□□□ 0.01
NEDD1-213ENST00000557644 GPR161Q8N6U8 529 aaKnown RBP15.13■□□□□ 0.01
NEDD1-213ENST00000557644 DDHD1Q8NEL9 900 aa15.13■□□□□ 0.01
NEDD1-213ENST00000557644 OR56A4Q8NGH8 313 aa15.13■□□□□ 0.01
NEDD1-213ENST00000557644 OR2I1PQ8NGU4 316 aa15.13■□□□□ 0.01
NEDD1-213ENST00000557644 SGSM3Q96HU1 749 aa15.13■□□□□ 0.01
NEDD1-213ENST00000557644 SLC17A6Q9P2U8 582 aa15.13■□□□□ 0.01
NEDD1-213ENST00000557644 ATXN10Q9UBB4 475 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms