RNA–Protein interactions for RNA: ENST00000557498.1

ARHGEF40-208, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-208ENST00000557498 KRBA1A5PL33 1030 aa14.36□□□□□ -0.11
ARHGEF40-208ENST00000557498 A6NNZ2 444 aa14.36□□□□□ -0.11
ARHGEF40-208ENST00000557498 PRMT5O14744 637 aaPredicted RBP14.36□□□□□ -0.11
ARHGEF40-208ENST00000557498 RECQL5O94762 991 aaPredicted RBP14.36□□□□□ -0.11
ARHGEF40-208ENST00000557498 RHOBTB1O94844 696 aa14.36□□□□□ -0.11
ARHGEF40-208ENST00000557498 WISP3O95389 354 aaPredicted RBP14.36□□□□□ -0.11
ARHGEF40-208ENST00000557498 TOP3BO95985 862 aaKnown RBP14.36□□□□□ -0.11
ARHGEF40-208ENST00000557498 ESR1P03372 595 aa14.36□□□□□ -0.11
ARHGEF40-208ENST00000557498 COL6A2P12110 1019 aa14.36□□□□□ -0.11
ARHGEF40-208ENST00000557498 TARSP26639 723 aaKnown RBP14.36□□□□□ -0.11
ARHGEF40-208ENST00000557498 GMPRP36959 345 aa14.36□□□□□ -0.11
ARHGEF40-208ENST00000557498 ETV4P43268 484 aa14.36□□□□□ -0.11
ARHGEF40-208ENST00000557498 PGGT1BP53609 377 aa14.36□□□□□ -0.11
ARHGEF40-208ENST00000557498 STARD6P59095 220 aa14.36□□□□□ -0.11
ARHGEF40-208ENST00000557498 GNGT1P63211 74 aa14.36□□□□□ -0.11
ARHGEF40-208ENST00000557498 ZNF460Q14592 562 aa14.36□□□□□ -0.11
ARHGEF40-208ENST00000557498 TUBB8Q3ZCM7 444 aa14.36□□□□□ -0.11
ARHGEF40-208ENST00000557498 TTC31Q49AM3 519 aaPredicted RBP14.36□□□□□ -0.11
ARHGEF40-208ENST00000557498 TTC19Q6DKK2 380 aaPredicted RBP14.36□□□□□ -0.11
ARHGEF40-208ENST00000557498 TMEM92Q6UXU6 159 aa14.36□□□□□ -0.11
ARHGEF40-208ENST00000557498 KYAT3Q6YP21 454 aaKnown RBP14.36□□□□□ -0.11
ARHGEF40-208ENST00000557498 Q6ZS52 159 aa14.36□□□□□ -0.11
ARHGEF40-208ENST00000557498 CCDC91Q7Z6B0 441 aa14.36□□□□□ -0.11
ARHGEF40-208ENST00000557498 LCA5Q86VQ0 697 aa14.36□□□□□ -0.11
ARHGEF40-208ENST00000557498 SYNPOQ8N3V7 929 aa14.36□□□□□ -0.11
ARHGEF40-208ENST00000557498 AP2M1Q96CW1 435 aa14.36□□□□□ -0.11
ARHGEF40-208ENST00000557498 SHDQ96IW2 340 aa14.36□□□□□ -0.11
ARHGEF40-208ENST00000557498 BIRC8Q96P09 236 aa14.36□□□□□ -0.11
ARHGEF40-208ENST00000557498 FAM111AQ96PZ2 611 aa14.36□□□□□ -0.11
ARHGEF40-208ENST00000557498 ZSCAN5AQ9BUG6 496 aa14.36□□□□□ -0.11
ARHGEF40-208ENST00000557498 RIOK2Q9BVS4 552 aaKnown RBP14.36□□□□□ -0.11
ARHGEF40-208ENST00000557498 C12orf65Q9H3J6 166 aaKnown RBP14.36□□□□□ -0.11
ARHGEF40-208ENST00000557498 POPDC3Q9HBV1 291 aa14.36□□□□□ -0.11
ARHGEF40-208ENST00000557498 LTB4R2Q9NPC1 389 aa14.36□□□□□ -0.11
ARHGEF40-208ENST00000557498 FBXL12Q9NXK8 326 aa14.36□□□□□ -0.11
ARHGEF40-208ENST00000557498 TMPRSS11EQ9UL52 423 aa14.36□□□□□ -0.11
ARHGEF40-208ENST00000557498 GRID1Q9ULK0 1009 aa14.36□□□□□ -0.11
ARHGEF40-208ENST00000557498 COQ6Q9Y2Z9 468 aa14.36□□□□□ -0.11
ARHGEF40-208ENST00000557498 ACOT9Q9Y305 439 aa14.36□□□□□ -0.11
ARHGEF40-208ENST00000557498 IGLV3-16A0A075B6K0 115 aa14.35□□□□□ -0.11
ARHGEF40-208ENST00000557498 TCRBV21S2A2A0A5A6 115 aa14.35□□□□□ -0.11
ARHGEF40-208ENST00000557498 CHURC1-FNTBB4DL54 471 aa14.35□□□□□ -0.11
ARHGEF40-208ENST00000557498 SHOX2O60902 331 aaPredicted RBP14.35□□□□□ -0.11
ARHGEF40-208ENST00000557498 ASMTLO95671 621 aa14.35□□□□□ -0.11
ARHGEF40-208ENST00000557498 DHRS4L1P0CG22 281 aa14.35□□□□□ -0.11
ARHGEF40-208ENST00000557498 CD9P21926 228 aa14.35□□□□□ -0.11
ARHGEF40-208ENST00000557498 TIAL1Q01085 375 aaKnown RBP eCLIP14.35□□□□□ -0.11
ARHGEF40-208ENST00000557498 CRY1Q16526 586 aa14.35□□□□□ -0.11
ARHGEF40-208ENST00000557498 GPRC6AQ5T6X5 926 aa14.35□□□□□ -0.11
ARHGEF40-208ENST00000557498 N4BP2L1Q5TBK1 243 aaPredicted RBP14.35□□□□□ -0.11
ARHGEF40-208ENST00000557498 HHATQ5VTY9 493 aa14.35□□□□□ -0.11
ARHGEF40-208ENST00000557498 USP30Q70CQ3 517 aa14.35□□□□□ -0.11
ARHGEF40-208ENST00000557498 PIM3Q86V86 326 aa14.35□□□□□ -0.11
ARHGEF40-208ENST00000557498 UBALD2Q8IYN6 164 aa14.35□□□□□ -0.11
ARHGEF40-208ENST00000557498 PLD6Q8N2A8 252 aaKnown RBP14.35□□□□□ -0.11
ARHGEF40-208ENST00000557498 GANCQ8TET4 914 aa14.35□□□□□ -0.11
ARHGEF40-208ENST00000557498 KCTD4Q8WVF5 259 aa14.35□□□□□ -0.11
ARHGEF40-208ENST00000557498 DYDC1Q8WWB3 177 aa14.35□□□□□ -0.11
ARHGEF40-208ENST00000557498 CCDC97Q96F63 343 aaPredicted RBP14.35□□□□□ -0.11
ARHGEF40-208ENST00000557498 SIPA1Q96FS4 1042 aa14.35□□□□□ -0.11
ARHGEF40-208ENST00000557498 MRGPRX1Q96LB2 322 aa14.35□□□□□ -0.11
ARHGEF40-208ENST00000557498 TSNARE1Q96NA8 513 aa14.35□□□□□ -0.11
ARHGEF40-208ENST00000557498 VPS35Q96QK1 796 aa14.35□□□□□ -0.11
ARHGEF40-208ENST00000557498 COPS8Q99627 209 aa14.35□□□□□ -0.11
ARHGEF40-208ENST00000557498 PAIP2Q9BPZ3 127 aaKnown RBP14.35□□□□□ -0.11
ARHGEF40-208ENST00000557498 BOCQ9BWV1 1114 aa14.35□□□□□ -0.11
ARHGEF40-208ENST00000557498 C1QTNF1Q9BXJ1 281 aa14.35□□□□□ -0.11
ARHGEF40-208ENST00000557498 CLPBQ9H078 707 aa14.35□□□□□ -0.11
ARHGEF40-208ENST00000557498 LMAN1LQ9HAT1 526 aa14.35□□□□□ -0.11
ARHGEF40-208ENST00000557498 GPAMQ9HCL2 828 aa14.35□□□□□ -0.11
ARHGEF40-208ENST00000557498 GNPTGQ9UJJ9 305 aa14.35□□□□□ -0.11
ARHGEF40-208ENST00000557498 EMCNQ9ULC0 261 aa14.35□□□□□ -0.11
ARHGEF40-208ENST00000557498 FZD4Q9ULV1 537 aa14.35□□□□□ -0.11
ARHGEF40-208ENST00000557498 MED16Q9Y2X0 877 aa14.35□□□□□ -0.11
ARHGEF40-208ENST00000557498 SZT2Q5T011 3432 aa14.34□□□□□ -0.11
ARHGEF40-208ENST00000557498 KANSL1LA0AUZ9 987 aa14.34□□□□□ -0.11
ARHGEF40-208ENST00000557498 FADS2P1A8MWK0 482 aa14.34□□□□□ -0.11
ARHGEF40-208ENST00000557498 H3BMM5 538 aa14.34□□□□□ -0.11
ARHGEF40-208ENST00000557498 PLRG1O43660 514 aaKnown RBP14.34□□□□□ -0.11
ARHGEF40-208ENST00000557498 PLIN3O60664 434 aa14.34□□□□□ -0.11
ARHGEF40-208ENST00000557498 NIPSNAP2O75323 286 aa14.34□□□□□ -0.11
ARHGEF40-208ENST00000557498 VPS26AO75436 327 aa14.34□□□□□ -0.11
ARHGEF40-208ENST00000557498 PCDH8O95206 1070 aa14.34□□□□□ -0.11
ARHGEF40-208ENST00000557498 NDUFV2P19404 249 aa14.34□□□□□ -0.11
ARHGEF40-208ENST00000557498 NSG1P42857 185 aa14.34□□□□□ -0.11
ARHGEF40-208ENST00000557498 IL9RQ01113 521 aa14.34□□□□□ -0.11
ARHGEF40-208ENST00000557498 DPTQ07507 201 aa14.34□□□□□ -0.11
ARHGEF40-208ENST00000557498 SFSWAPQ12872 951 aaKnown RBP14.34□□□□□ -0.11
ARHGEF40-208ENST00000557498 PDAP1Q13442 181 aaKnown RBP14.34□□□□□ -0.11
ARHGEF40-208ENST00000557498 UBXN2BQ14CS0 331 aa14.34□□□□□ -0.11
ARHGEF40-208ENST00000557498 TSNAXIP1Q2TAA8 658 aa14.34□□□□□ -0.11
ARHGEF40-208ENST00000557498 SETMARQ53H47 684 aaPredicted RBP14.34□□□□□ -0.11
ARHGEF40-208ENST00000557498 PTRHD1Q6GMV3 140 aaKnown RBP14.34□□□□□ -0.11
ARHGEF40-208ENST00000557498 C16orf46Q6P387 395 aa14.34□□□□□ -0.11
ARHGEF40-208ENST00000557498 KIAA1324Q6UXG2 1013 aaKnown RBP14.34□□□□□ -0.11
ARHGEF40-208ENST00000557498 MACC1Q6ZN28 852 aa14.34□□□□□ -0.11
ARHGEF40-208ENST00000557498 TBC1D1Q86TI0 1168 aaPredicted RBP14.34□□□□□ -0.11
ARHGEF40-208ENST00000557498 KBTBD6Q86V97 674 aa14.34□□□□□ -0.11
ARHGEF40-208ENST00000557498 TAX1BP1Q86VP1 789 aa14.34□□□□□ -0.11
ARHGEF40-208ENST00000557498 NLRP8Q86W28 1048 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms