RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 LDLRAP1Q5SW96 308 aa13.68□□□□□ -0.22
VPS33B-206ENST00000557358 FAM182AQ5T1J6 154 aa13.68□□□□□ -0.22
VPS33B-206ENST00000557358 CERCAMQ5T4B2 595 aa13.68□□□□□ -0.22
VPS33B-206ENST00000557358 C4orf22Q6V702 233 aa13.68□□□□□ -0.22
VPS33B-206ENST00000557358 CHST15Q7LFX5 561 aaPredicted RBP13.68□□□□□ -0.22
VPS33B-206ENST00000557358 CCNJLQ8IV13 435 aa13.68□□□□□ -0.22
VPS33B-206ENST00000557358 LSMEM2Q8N112 164 aa13.68□□□□□ -0.22
VPS33B-206ENST00000557358 C17orf53Q8N3J3 647 aaPredicted RBP13.68□□□□□ -0.22
VPS33B-206ENST00000557358 CCL4L1Q8NHW4 92 aa13.68□□□□□ -0.22
VPS33B-206ENST00000557358 SLC35B2Q8TB61 432 aa13.68□□□□□ -0.22
VPS33B-206ENST00000557358 DTX3LQ8TDB6 740 aa13.68□□□□□ -0.22
VPS33B-206ENST00000557358 VPS35Q96QK1 796 aa13.68□□□□□ -0.22
VPS33B-206ENST00000557358 GFM1Q96RP9 751 aaKnown RBP13.68□□□□□ -0.22
VPS33B-206ENST00000557358 ZMYND15Q9H091 742 aa13.68□□□□□ -0.22
VPS33B-206ENST00000557358 OR2AG1Q9H205 316 aa13.68□□□□□ -0.22
VPS33B-206ENST00000557358 CAAP1Q9H8G2 361 aa13.68□□□□□ -0.22
VPS33B-206ENST00000557358 AKAP7Q9P0M2 348 aaPredicted RBP13.68□□□□□ -0.22
VPS33B-206ENST00000557358 LRIT1Q9P2V4 623 aa13.68□□□□□ -0.22
VPS33B-206ENST00000557358 SPO11Q9Y5K1 396 aa13.68□□□□□ -0.22
VPS33B-206ENST00000557358 U3KQA8 63 aa13.68□□□□□ -0.22
VPS33B-206ENST00000557358 ZFC3H1O60293 1989 aaKnown RBP13.67□□□□□ -0.22
VPS33B-206ENST00000557358 OR5K4A6NMS3 321 aa13.67□□□□□ -0.22
VPS33B-206ENST00000557358 KMOO15229 486 aa13.67□□□□□ -0.22
VPS33B-206ENST00000557358 NUAK1O60285 661 aa13.67□□□□□ -0.22
VPS33B-206ENST00000557358 CEP104O60308 925 aa13.67□□□□□ -0.22
VPS33B-206ENST00000557358 CDK14O94921 469 aa13.67□□□□□ -0.22
VPS33B-206ENST00000557358 RALBP11234 206 aa13.67□□□□□ -0.22
VPS33B-206ENST00000557358 ACP5P13686 325 aa13.67□□□□□ -0.22
VPS33B-206ENST00000557358 AK4P27144 223 aaPredicted RBP13.67□□□□□ -0.22
VPS33B-206ENST00000557358 CYP4F3Q08477 520 aa13.67□□□□□ -0.22
VPS33B-206ENST00000557358 INSCQ1MX18 579 aa13.67□□□□□ -0.22
VPS33B-206ENST00000557358 CDCP2Q5VXM1 449 aa13.67□□□□□ -0.22
VPS33B-206ENST00000557358 RANBP10Q6VN20 620 aa13.67□□□□□ -0.22
VPS33B-206ENST00000557358 GSTA5Q7RTV2 222 aa13.67□□□□□ -0.22
VPS33B-206ENST00000557358 LRRTM4Q86VH4 590 aa13.67□□□□□ -0.22
VPS33B-206ENST00000557358 SH3KBP1Q96B97 665 aa13.67□□□□□ -0.22
VPS33B-206ENST00000557358 EID2BQ96D98 161 aa13.67□□□□□ -0.22
VPS33B-206ENST00000557358 TMEM74Q96NL1 305 aa13.67□□□□□ -0.22
VPS33B-206ENST00000557358 WDR24Q96S15 920 aa13.67□□□□□ -0.22
VPS33B-206ENST00000557358 NAP1L3Q99457 506 aaPredicted RBP13.67□□□□□ -0.22
VPS33B-206ENST00000557358 LRRN3Q9H3W5 708 aa13.67□□□□□ -0.22
VPS33B-206ENST00000557358 IL17CQ9P0M4 197 aa13.67□□□□□ -0.22
VPS33B-206ENST00000557358 ATXN10Q9UBB4 475 aa13.67□□□□□ -0.22
VPS33B-206ENST00000557358 DKK4Q9UBT3 224 aa13.67□□□□□ -0.22
VPS33B-206ENST00000557358 ZMIZ1Q9ULJ6 1067 aa13.67□□□□□ -0.22
VPS33B-206ENST00000557358 CNOT6Q9ULM6 557 aaKnown RBP13.67□□□□□ -0.22
VPS33B-206ENST00000557358 R3HDM2Q9Y2K5 976 aaKnown RBP13.67□□□□□ -0.22
VPS33B-206ENST00000557358 CACNA1BQ00975 2339 aa13.66□□□□□ -0.22
VPS33B-206ENST00000557358 AURKAO14965 403 aa13.66□□□□□ -0.22
VPS33B-206ENST00000557358 LIASO43766 372 aa13.66□□□□□ -0.22
VPS33B-206ENST00000557358 KIF5CO60282 957 aa13.66□□□□□ -0.22
VPS33B-206ENST00000557358 NOBOXO60393 691 aa13.66□□□□□ -0.22
VPS33B-206ENST00000557358 KCNJ13O60928 360 aa13.66□□□□□ -0.22
VPS33B-206ENST00000557358 DNAJC6O75061 913 aa13.66□□□□□ -0.22
VPS33B-206ENST00000557358 USP12O75317 370 aa13.66□□□□□ -0.22
VPS33B-206ENST00000557358 ECEL1O95672 775 aa13.66□□□□□ -0.22
VPS33B-206ENST00000557358 RPLP0P05388 317 aaKnown RBP13.66□□□□□ -0.22
VPS33B-206ENST00000557358 MSH3P20585 1137 aa13.66□□□□□ -0.22
VPS33B-206ENST00000557358 RBMS1P29558 406 aaKnown RBP13.66□□□□□ -0.22
VPS33B-206ENST00000557358 AKT1P31749 480 aa13.66□□□□□ -0.22
VPS33B-206ENST00000557358 ADRA1AP35348 466 aa13.66□□□□□ -0.22
VPS33B-206ENST00000557358 GPR3P46089 330 aa13.66□□□□□ -0.22
VPS33B-206ENST00000557358 HLTFQ14527 1009 aaKnown RBP eCLIP13.66□□□□□ -0.22
VPS33B-206ENST00000557358 CCNG2Q16589 344 aa13.66□□□□□ -0.22
VPS33B-206ENST00000557358 LONRF2Q1L5Z9 754 aa13.66□□□□□ -0.22
VPS33B-206ENST00000557358 ISXQ2M1V0 245 aa13.66□□□□□ -0.22
VPS33B-206ENST00000557358 PERM1Q5SV97 790 aa13.66□□□□□ -0.22
VPS33B-206ENST00000557358 KCTD16Q68DU8 428 aa13.66□□□□□ -0.22
VPS33B-206ENST00000557358 FAM151BQ6UXP7 276 aa13.66□□□□□ -0.22
VPS33B-206ENST00000557358 PPP1R21Q6ZMI0 780 aa13.66□□□□□ -0.22
VPS33B-206ENST00000557358 TRAPPC5Q8IUR0 188 aa13.66□□□□□ -0.22
VPS33B-206ENST00000557358 TTC30BQ8N4P2 665 aa13.66□□□□□ -0.22
VPS33B-206ENST00000557358 Q8N9G6 341 aaPredicted RBP13.66□□□□□ -0.22
VPS33B-206ENST00000557358 DNAAF3Q8N9W5 541 aa13.66□□□□□ -0.22
VPS33B-206ENST00000557358 HEXDCQ8WVB3 486 aa13.66□□□□□ -0.22
VPS33B-206ENST00000557358 C1orf54Q8WWF1 131 aa13.66□□□□□ -0.22
VPS33B-206ENST00000557358 ATG4AQ8WYN0 398 aa13.66□□□□□ -0.22
VPS33B-206ENST00000557358 ULK4Q96C45 1275 aa13.66□□□□□ -0.22
VPS33B-206ENST00000557358 DCUN1D1Q96GG9 259 aa13.66□□□□□ -0.22
VPS33B-206ENST00000557358 AHCYL2Q96HN2 611 aaKnown RBP13.66□□□□□ -0.22
VPS33B-206ENST00000557358 C19orf43Q9BQ61 176 aa13.66□□□□□ -0.22
VPS33B-206ENST00000557358 APOL2Q9BQE5 337 aa13.66□□□□□ -0.22
VPS33B-206ENST00000557358 TMEM121BQ9BXQ6 578 aaPredicted RBP13.66□□□□□ -0.22
VPS33B-206ENST00000557358 OSGEPL1Q9H4B0 414 aa13.66□□□□□ -0.22
VPS33B-206ENST00000557358 IL26Q9NPH9 171 aa13.66□□□□□ -0.22
VPS33B-206ENST00000557358 SPATS2LQ9NUQ6 558 aaKnown RBP13.66□□□□□ -0.22
VPS33B-206ENST00000557358 PAK5Q9P286 719 aa13.66□□□□□ -0.22
VPS33B-206ENST00000557358 JRKLQ9Y4A0 524 aa13.66□□□□□ -0.22
VPS33B-206ENST00000557358 OAS3Q9Y6K5 1087 aaKnown RBP13.66□□□□□ -0.22
VPS33B-206ENST00000557358 TCRBV7S2A1N4TA0A589 114 aa13.65□□□□□ -0.22
VPS33B-206ENST00000557358 CFAP99D6REC4 459 aa13.65□□□□□ -0.22
VPS33B-206ENST00000557358 SNX2O60749 519 aa13.65□□□□□ -0.22
VPS33B-206ENST00000557358 PRAMEF1O95521 474 aa13.65□□□□□ -0.22
VPS33B-206ENST00000557358 AP2A1O95782 977 aa13.65□□□□□ -0.22
VPS33B-206ENST00000557358 FGGP02679 453 aa13.65□□□□□ -0.22
VPS33B-206ENST00000557358 FUCA1P04066 466 aa13.65□□□□□ -0.22
VPS33B-206ENST00000557358 ZNF8P17098 575 aaPredicted RBP13.65□□□□□ -0.22
VPS33B-206ENST00000557358 ITGALP20701 1170 aa13.65□□□□□ -0.22
VPS33B-206ENST00000557358 ALDH4A1P30038 563 aa13.65□□□□□ -0.22
VPS33B-206ENST00000557358 CLDN6P56747 220 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms