RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 LRRC66Q68CR7 880 aa12.39□□□□□ -0.43
PSEN1-221ENST00000557293 TRIM72Q6ZMU5 477 aa12.39□□□□□ -0.43
PSEN1-221ENST00000557293 TMEM26Q6ZUK4 368 aa12.39□□□□□ -0.43
PSEN1-221ENST00000557293 RFX8Q6ZV50 586 aa12.39□□□□□ -0.43
PSEN1-221ENST00000557293 RASGRP3Q8IV61 690 aa12.39□□□□□ -0.43
PSEN1-221ENST00000557293 EXD1Q8NHP7 514 aa12.39□□□□□ -0.43
PSEN1-221ENST00000557293 ZNF599Q96NL3 588 aa12.39□□□□□ -0.43
PSEN1-221ENST00000557293 TGM7Q96PF1 710 aa12.39□□□□□ -0.43
PSEN1-221ENST00000557293 PHF12Q96QT6 1004 aa12.39□□□□□ -0.43
PSEN1-221ENST00000557293 RANBP9Q96S59 729 aa12.39□□□□□ -0.43
PSEN1-221ENST00000557293 PEBP4Q96S96 227 aa12.39□□□□□ -0.43
PSEN1-221ENST00000557293 HERPUD2Q9BSE4 406 aa12.39□□□□□ -0.43
PSEN1-221ENST00000557293 MFRPQ9BY79 579 aa12.39□□□□□ -0.43
PSEN1-221ENST00000557293 BRD8Q9H0E9 1235 aa12.39□□□□□ -0.43
PSEN1-221ENST00000557293 ING2Q9H160 280 aa12.39□□□□□ -0.43
PSEN1-221ENST00000557293 UCK1Q9HA47 277 aa12.39□□□□□ -0.43
PSEN1-221ENST00000557293 VPS18Q9P253 973 aa12.39□□□□□ -0.43
PSEN1-221ENST00000557293 SEMA5BQ9P283 1151 aa12.39□□□□□ -0.43
PSEN1-221ENST00000557293 ZNF624Q9P2J8 865 aaPredicted RBP12.39□□□□□ -0.43
PSEN1-221ENST00000557293 LNPEPQ9UIQ6 1025 aa12.39□□□□□ -0.43
PSEN1-221ENST00000557293 AP4E1Q9UPM8 1137 aa12.39□□□□□ -0.43
PSEN1-221ENST00000557293 OTOGQ6ZRI0 2925 aa12.38□□□□□ -0.43
PSEN1-221ENST00000557293 PRRC2CQ9Y520 2896 aaKnown RBP12.38□□□□□ -0.43
PSEN1-221ENST00000557293 ARGFXA6NJG6 315 aa12.38□□□□□ -0.43
PSEN1-221ENST00000557293 EPHB6O15197 1021 aa12.38□□□□□ -0.43
PSEN1-221ENST00000557293 SNX2O60749 519 aa12.38□□□□□ -0.43
PSEN1-221ENST00000557293 ACP5P13686 325 aa12.38□□□□□ -0.43
PSEN1-221ENST00000557293 PRKCSHP14314 528 aaPredicted RBP12.38□□□□□ -0.43
PSEN1-221ENST00000557293 CASP14P31944 242 aa12.38□□□□□ -0.43
PSEN1-221ENST00000557293 CLCNKAP51800 687 aa12.38□□□□□ -0.43
PSEN1-221ENST00000557293 STC1P52823 247 aa12.38□□□□□ -0.43
PSEN1-221ENST00000557293 MAXP61244 160 aa12.38□□□□□ -0.43
PSEN1-221ENST00000557293 HSP90AA4PQ58FG1 418 aa12.38□□□□□ -0.43
PSEN1-221ENST00000557293 SLC6A19Q695T7 634 aa12.38□□□□□ -0.43
PSEN1-221ENST00000557293 PWWP2BQ6NUJ5 590 aa12.38□□□□□ -0.43
PSEN1-221ENST00000557293 ADAMTS17Q8TE56 1095 aa12.38□□□□□ -0.43
PSEN1-221ENST00000557293 THAP4Q8WY91 577 aa12.38□□□□□ -0.43
PSEN1-221ENST00000557293 MCEEQ96PE7 176 aa12.38□□□□□ -0.43
PSEN1-221ENST00000557293 MGME1Q9BQP7 344 aa12.38□□□□□ -0.43
PSEN1-221ENST00000557293 SNRNP25Q9BV90 132 aaKnown RBP12.38□□□□□ -0.43
PSEN1-221ENST00000557293 DHX35Q9H5Z1 703 aaKnown RBP12.38□□□□□ -0.43
PSEN1-221ENST00000557293 CWC15Q9P013 229 aaKnown RBP12.38□□□□□ -0.43
PSEN1-221ENST00000557293 PCDHGB7Q9Y5F8 929 aa12.38□□□□□ -0.43
PSEN1-221ENST00000557293 ADGRG1Q9Y653 693 aa12.38□□□□□ -0.43
PSEN1-221ENST00000557293 C2CD3Q4AC94 2353 aa12.38□□□□□ -0.43
PSEN1-221ENST00000557293 POLQO75417 2590 aa12.37□□□□□ -0.43
PSEN1-221ENST00000557293 OR5K4A6NMS3 321 aa12.37□□□□□ -0.43
PSEN1-221ENST00000557293 FADS2P1A8MWK0 482 aa12.37□□□□□ -0.43
PSEN1-221ENST00000557293 MAFKO60675 156 aa12.37□□□□□ -0.43
PSEN1-221ENST00000557293 UBXN7O94888 489 aa12.37□□□□□ -0.43
PSEN1-221ENST00000557293 PRLP01236 227 aa12.37□□□□□ -0.43
PSEN1-221ENST00000557293 CALB1P05937 261 aa12.37□□□□□ -0.43
PSEN1-221ENST00000557293 FOLR1P15328 257 aa12.37□□□□□ -0.43
PSEN1-221ENST00000557293 NELFEP18615 380 aaKnown RBP12.37□□□□□ -0.43
PSEN1-221ENST00000557293 PTPN4P29074 926 aa12.37□□□□□ -0.43
PSEN1-221ENST00000557293 SOX5P35711 763 aa12.37□□□□□ -0.43
PSEN1-221ENST00000557293 PTGIRP43119 386 aa12.37□□□□□ -0.43
PSEN1-221ENST00000557293 NSFP46459 744 aaKnown RBP12.37□□□□□ -0.43
PSEN1-221ENST00000557293 HCAR3P49019 387 aa12.37□□□□□ -0.43
PSEN1-221ENST00000557293 KLK7P49862 253 aa12.37□□□□□ -0.43
PSEN1-221ENST00000557293 DPYSQ14117 519 aa12.37□□□□□ -0.43
PSEN1-221ENST00000557293 NR6A1Q15406 480 aa12.37□□□□□ -0.43
PSEN1-221ENST00000557293 PLEKHN1Q494U1 663 aaPredicted RBP12.37□□□□□ -0.43
PSEN1-221ENST00000557293 CRB2Q5IJ48 1285 aa12.37□□□□□ -0.43
PSEN1-221ENST00000557293 ERMARDQ5T6L9 678 aa12.37□□□□□ -0.43
PSEN1-221ENST00000557293 ARMC12Q5T9G4 340 aa12.37□□□□□ -0.43
PSEN1-221ENST00000557293 PRSS42Q7Z5A4 293 aa12.37□□□□□ -0.43
PSEN1-221ENST00000557293 RSC1A1Q92681 617 aa12.37□□□□□ -0.43
PSEN1-221ENST00000557293 SNRNP40Q96DI7 357 aaKnown RBP12.37□□□□□ -0.43
PSEN1-221ENST00000557293 NUDT9Q9BW91 350 aa12.37□□□□□ -0.43
PSEN1-221ENST00000557293 GPR87Q9BY21 358 aa12.37□□□□□ -0.43
PSEN1-221ENST00000557293 STN1Q9H668 368 aaKnown RBP12.37□□□□□ -0.43
PSEN1-221ENST00000557293 ETNK2Q9NVF9 386 aa12.37□□□□□ -0.43
PSEN1-221ENST00000557293 ASF1BQ9NVP2 202 aa12.37□□□□□ -0.43
PSEN1-221ENST00000557293 EPHA6Q9UF33 1036 aa12.37□□□□□ -0.43
PSEN1-221ENST00000557293 SLC23A2Q9UGH3 650 aa12.37□□□□□ -0.43
PSEN1-221ENST00000557293 FARSAQ9Y285 508 aaKnown RBP12.37□□□□□ -0.43
PSEN1-221ENST00000557293 SLC5A6Q9Y289 635 aa12.37□□□□□ -0.43
PSEN1-221ENST00000557293 ZNF451Q9Y4E5 1061 aa12.37□□□□□ -0.43
PSEN1-221ENST00000557293 A0A0J9YYE9 177 aa12.36□□□□□ -0.43
PSEN1-221ENST00000557293 EIF3CLB5ME19 914 aaKnown RBP12.36□□□□□ -0.43
PSEN1-221ENST00000557293 NUAK1O60285 661 aa12.36□□□□□ -0.43
PSEN1-221ENST00000557293 DPM1O60762 260 aa12.36□□□□□ -0.43
PSEN1-221ENST00000557293 CLDN7O95471 211 aa12.36□□□□□ -0.43
PSEN1-221ENST00000557293 TRBC1P01850 177 aa12.36□□□□□ -0.43
PSEN1-221ENST00000557293 MT-ND3P03897 115 aa12.36□□□□□ -0.43
PSEN1-221ENST00000557293 LPOP22079 712 aaPredicted RBP12.36□□□□□ -0.43
PSEN1-221ENST00000557293 GRNP28799 593 aaKnown RBP12.36□□□□□ -0.43
PSEN1-221ENST00000557293 HSPA9P38646 679 aaKnown RBP12.36□□□□□ -0.43
PSEN1-221ENST00000557293 CHRNA6Q15825 494 aa12.36□□□□□ -0.43
PSEN1-221ENST00000557293 RALGPS1Q5JS13 557 aa12.36□□□□□ -0.43
PSEN1-221ENST00000557293 CACHD1Q5VU97 1274 aa12.36□□□□□ -0.43
PSEN1-221ENST00000557293 DNAJC24Q6P3W2 148 aa12.36□□□□□ -0.43
PSEN1-221ENST00000557293 CERS6Q6ZMG9 384 aa12.36□□□□□ -0.43
PSEN1-221ENST00000557293 ZNF517Q6ZMY9 492 aaPredicted RBP12.36□□□□□ -0.43
PSEN1-221ENST00000557293 USP45Q70EL2 814 aa12.36□□□□□ -0.43
PSEN1-221ENST00000557293 SYVN1Q86TM6 617 aa12.36□□□□□ -0.43
PSEN1-221ENST00000557293 PPP1R3BQ86XI6 285 aa12.36□□□□□ -0.43
PSEN1-221ENST00000557293 AOPEPQ8N6M6 819 aa12.36□□□□□ -0.43
PSEN1-221ENST00000557293 FDCSPQ8NFU4 85 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms