RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 CFL1P23528 166 aaKnown RBP8.79□□□□□ -1
SYNE3-205ENST00000557275 AIF1P55008 147 aa8.79□□□□□ -1
SYNE3-205ENST00000557275 MANFP55145 182 aaKnown RBP8.79□□□□□ -1
SYNE3-205ENST00000557275 ACVR2BQ13705 512 aa8.79□□□□□ -1
SYNE3-205ENST00000557275 GNASQ5JWF2 1037 aa8.79□□□□□ -1
SYNE3-205ENST00000557275 LDHDQ86WU2 507 aa8.79□□□□□ -1
SYNE3-205ENST00000557275 SOHLH2Q9NX45 425 aa8.79□□□□□ -1
SYNE3-205ENST00000557275 IKZF2Q9UKS7 526 aa8.79□□□□□ -1
SYNE3-205ENST00000557275 ISPDA4D126 451 aa8.79□□□□□ -1
SYNE3-205ENST00000557275 FAM196BA6NMK8 535 aa8.79□□□□□ -1
SYNE3-205ENST00000557275 MTHFRP42898 656 aa8.79□□□□□ -1
SYNE3-205ENST00000557275 TTI2Q6NXR4 508 aa8.79□□□□□ -1
SYNE3-205ENST00000557275 DUS1LQ6P1R4 473 aaKnown RBP8.79□□□□□ -1
SYNE3-205ENST00000557275 RAB9BQ9NP90 201 aa8.79□□□□□ -1
SYNE3-205ENST00000557275 NANSQ9NR45 359 aa8.79□□□□□ -1
SYNE3-205ENST00000557275 J3QR89 54 aa8.79□□□□□ -1
SYNE3-205ENST00000557275 NKRFO15226 690 aaKnown RBP eCLIP8.79□□□□□ -1
SYNE3-205ENST00000557275 ATE1O95260 518 aa8.79□□□□□ -1
SYNE3-205ENST00000557275 HOXB9P17482 250 aaPredicted RBP8.79□□□□□ -1
SYNE3-205ENST00000557275 TXNL4AP83876 142 aaKnown RBP8.79□□□□□ -1
SYNE3-205ENST00000557275 STXBP5Q5T5C0 1151 aa8.79□□□□□ -1
SYNE3-205ENST00000557275 DCDC5Q6ZRR9 648 aa8.79□□□□□ -1
SYNE3-205ENST00000557275 TPGS1Q6ZTW0 290 aa8.79□□□□□ -1
SYNE3-205ENST00000557275 LINGO2Q7L985 606 aa8.79□□□□□ -1
SYNE3-205ENST00000557275 ADGRD2Q7Z7M1 963 aa8.79□□□□□ -1
SYNE3-205ENST00000557275 GLB1L3Q8NCI6 653 aaPredicted RBP8.79□□□□□ -1
SYNE3-205ENST00000557275 OR2T12Q8NG77 320 aa8.79□□□□□ -1
SYNE3-205ENST00000557275 LGR6Q9HBX8 967 aa8.79□□□□□ -1
SYNE3-205ENST00000557275 PLK2Q9NYY3 685 aa8.79□□□□□ -1
SYNE3-205ENST00000557275 NUFIP1Q9UHK0 495 aaKnown RBP8.79□□□□□ -1
SYNE3-205ENST00000557275 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.79□□□□□ -1
SYNE3-205ENST00000557275 KERAO60938 352 aa8.79□□□□□ -1
SYNE3-205ENST00000557275 OXSR1O95747 527 aaPredicted RBP8.79□□□□□ -1
SYNE3-205ENST00000557275 PIGKQ92643 395 aa8.79□□□□□ -1
SYNE3-205ENST00000557275 CGRRF1Q99675 332 aa8.79□□□□□ -1
SYNE3-205ENST00000557275 OR2B2Q9GZK3 357 aa8.79□□□□□ -1
SYNE3-205ENST00000557275 AGPAT3Q9NRZ7 376 aa8.79□□□□□ -1
SYNE3-205ENST00000557275 OVOS2A0A0G2JMS6 1433 aa8.79□□□□□ -1
SYNE3-205ENST00000557275 OVOS2A0A0J9YW53 1432 aa8.79□□□□□ -1
SYNE3-205ENST00000557275 OVOS2Q6IE36 1432 aa8.79□□□□□ -1
SYNE3-205ENST00000557275 HGFP14210 728 aa8.79□□□□□ -1
SYNE3-205ENST00000557275 PKNOX1P55347 436 aa8.79□□□□□ -1
SYNE3-205ENST00000557275 INTS6LQ5JSJ4 861 aaKnown RBP8.79□□□□□ -1
SYNE3-205ENST00000557275 ASB12Q8WXK4 309 aa8.79□□□□□ -1
SYNE3-205ENST00000557275 COL26A1Q96A83 441 aa8.79□□□□□ -1
SYNE3-205ENST00000557275 CENPNQ96H22 339 aaPredicted RBP8.79□□□□□ -1
SYNE3-205ENST00000557275 EBNA1BP2Q99848 306 aaKnown RBP8.79□□□□□ -1
SYNE3-205ENST00000557275 KATNBL1Q9H079 304 aa8.79□□□□□ -1
SYNE3-205ENST00000557275 OR2B6P58173 313 aa8.79□□□□□ -1
SYNE3-205ENST00000557275 DENND1CQ8IV53 801 aa8.79□□□□□ -1
SYNE3-205ENST00000557275 ZNF565Q8N9K5 539 aa8.79□□□□□ -1
SYNE3-205ENST00000557275 DYNLL2Q96FJ2 89 aa8.79□□□□□ -1
SYNE3-205ENST00000557275 HEPHQ9BQS7 1158 aa8.79□□□□□ -1
SYNE3-205ENST00000557275 ZNF69Q9UC07 566 aa8.79□□□□□ -1
SYNE3-205ENST00000557275 C17orf102A2RUQ5 167 aa8.79□□□□□ -1
SYNE3-205ENST00000557275 VAPBO95292 243 aa8.79□□□□□ -1
SYNE3-205ENST00000557275 UROSP10746 265 aa8.79□□□□□ -1
SYNE3-205ENST00000557275 CD247P20963 164 aa8.79□□□□□ -1
SYNE3-205ENST00000557275 RPL21P46778 160 aaKnown RBP8.79□□□□□ -1
SYNE3-205ENST00000557275 CAND1Q86VP6 1230 aaKnown RBP8.79□□□□□ -1
SYNE3-205ENST00000557275 RBFAQ8N0V3 343 aa8.79□□□□□ -1
SYNE3-205ENST00000557275 TAS2R3Q9NYW6 316 aa8.79□□□□□ -1
SYNE3-205ENST00000557275 AFDNP55196 1824 aaKnown RBP8.79□□□□□ -1
SYNE3-205ENST00000557275 ABCA9Q8IUA7 1624 aa8.79□□□□□ -1
SYNE3-205ENST00000557275 ENTPD6O75354 484 aa8.79□□□□□ -1
SYNE3-205ENST00000557275 SNCGO76070 127 aa8.79□□□□□ -1
SYNE3-205ENST00000557275 C6orf222P0C671 652 aaPredicted RBP8.79□□□□□ -1
SYNE3-205ENST00000557275 PTPN6P29350 595 aa8.79□□□□□ -1
SYNE3-205ENST00000557275 ZNF527Q8NB42 609 aa8.79□□□□□ -1
SYNE3-205ENST00000557275 KXD1Q9BQD3 176 aa8.79□□□□□ -1
SYNE3-205ENST00000557275 RPL36Q9Y3U8 105 aaKnown RBP8.79□□□□□ -1
SYNE3-205ENST00000557275 ARAP3Q8WWN8 1544 aa8.78□□□□□ -1
SYNE3-205ENST00000557275 TET3O43151 1660 aa8.78□□□□□ -1
SYNE3-205ENST00000557275 A0A0A0MRY4 1105 aa8.78□□□□□ -1
SYNE3-205ENST00000557275 PRORSD1PA6NEY8 169 aa8.78□□□□□ -1
SYNE3-205ENST00000557275 GTF2F2P13984 249 aa8.78□□□□□ -1
SYNE3-205ENST00000557275 USP4Q13107 963 aa8.78□□□□□ -1
SYNE3-205ENST00000557275 PRKD1Q15139 912 aaPredicted RBP8.78□□□□□ -1
SYNE3-205ENST00000557275 XKR4Q5GH76 650 aa8.78□□□□□ -1
SYNE3-205ENST00000557275 PI16Q6UXB8 463 aa8.78□□□□□ -1
SYNE3-205ENST00000557275 SPATA13Q96N96 652 aa8.78□□□□□ -1
SYNE3-205ENST00000557275 DBIP07108 87 aaKnown RBP8.78□□□□□ -1
SYNE3-205ENST00000557275 ACO1P21399 889 aaKnown RBP8.78□□□□□ -1
SYNE3-205ENST00000557275 SULT2A1Q06520 285 aa8.78□□□□□ -1
SYNE3-205ENST00000557275 MPPE1Q53F39 396 aa8.78□□□□□ -1
SYNE3-205ENST00000557275 RBM48Q5RL73 367 aaKnown RBP8.78□□□□□ -1
SYNE3-205ENST00000557275 PCSK9Q8NBP7 692 aaKnown RBP8.78□□□□□ -1
SYNE3-205ENST00000557275 NINJ1Q92982 152 aa8.78□□□□□ -1
SYNE3-205ENST00000557275 C2orf74A8MZ97 194 aa8.78□□□□□ -1
SYNE3-205ENST00000557275 TBX4P57082 545 aa8.78□□□□□ -1
SYNE3-205ENST00000557275 CA9Q16790 459 aa8.78□□□□□ -1
SYNE3-205ENST00000557275 CXorf57Q6NSI4 855 aaKnown RBP8.78□□□□□ -1
SYNE3-205ENST00000557275 EFCAB12Q6NXP0 572 aa8.78□□□□□ -1
SYNE3-205ENST00000557275 DPAGT1Q9H3H5 408 aa8.78□□□□□ -1
SYNE3-205ENST00000557275 TPK1Q9H3S4 243 aa8.78□□□□□ -1
SYNE3-205ENST00000557275 DBNDD1Q9H9R9 158 aa8.78□□□□□ -1
SYNE3-205ENST00000557275 SPG21Q9NZD8 308 aa8.78□□□□□ -1
SYNE3-205ENST00000557275 DNAJB4Q9UDY4 337 aa8.78□□□□□ -1
SYNE3-205ENST00000557275 C17orf113A0A1B0GUU1 675 aa8.78□□□□□ -1
SYNE3-205ENST00000557275 POLRMTO00411 1230 aaKnown RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms