RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 PSEN2P49810 448 aa11.32□□□□□ -0.6
SRP54-213ENST00000556994 RENBPP51606 427 aa11.32□□□□□ -0.6
SRP54-213ENST00000556994 ADARB1P78563 741 aaKnown RBP11.32□□□□□ -0.6
SRP54-213ENST00000556994 GALNT3Q14435 633 aa11.32□□□□□ -0.6
SRP54-213ENST00000556994 LDLRAP1Q5SW96 308 aa11.32□□□□□ -0.6
SRP54-213ENST00000556994 UGT3A1Q6NUS8 523 aa11.32□□□□□ -0.6
SRP54-213ENST00000556994 SCD5Q86SK9 330 aa11.32□□□□□ -0.6
SRP54-213ENST00000556994 TBC1D21Q8IYX1 336 aa11.32□□□□□ -0.6
SRP54-213ENST00000556994 CENPSQ8N2Z9 138 aa11.32□□□□□ -0.6
SRP54-213ENST00000556994 PGBD5Q8N414 524 aa11.32□□□□□ -0.6
SRP54-213ENST00000556994 SLC15A4Q8N697 577 aa11.32□□□□□ -0.6
SRP54-213ENST00000556994 ZBTB8BQ8NAP8 495 aaPredicted RBP11.32□□□□□ -0.6
SRP54-213ENST00000556994 TRIM54Q9BYV2 358 aa11.32□□□□□ -0.6
SRP54-213ENST00000556994 ADNPQ9H2P0 1102 aa11.32□□□□□ -0.6
SRP54-213ENST00000556994 FAM105AQ9NUU6 356 aa11.32□□□□□ -0.6
SRP54-213ENST00000556994 INTS10Q9NVR2 710 aaKnown RBP11.32□□□□□ -0.6
SRP54-213ENST00000556994 OSER1Q9NX31 292 aa11.32□□□□□ -0.6
SRP54-213ENST00000556994 SELENONQ9NZV5 590 aa11.32□□□□□ -0.6
SRP54-213ENST00000556994 RNF112Q9ULX5 631 aa11.32□□□□□ -0.6
SRP54-213ENST00000556994 COQ6Q9Y2Z9 468 aa11.32□□□□□ -0.6
SRP54-213ENST00000556994 C1orf232A0A0U1RR37 186 aa11.32□□□□□ -0.6
SRP54-213ENST00000556994 A0A1W2PQH9 124 aa11.32□□□□□ -0.6
SRP54-213ENST00000556994 RSL1D1O76021 490 aaKnown RBP11.32□□□□□ -0.6
SRP54-213ENST00000556994 PAPSS2O95340 614 aaPredicted RBP11.32□□□□□ -0.6
SRP54-213ENST00000556994 ALBP02768 609 aa11.32□□□□□ -0.6
SRP54-213ENST00000556994 FCGR1AP12314 374 aa11.32□□□□□ -0.6
SRP54-213ENST00000556994 IL12AP29459 219 aa11.32□□□□□ -0.6
SRP54-213ENST00000556994 FMO4P31512 558 aa11.32□□□□□ -0.6
SRP54-213ENST00000556994 TSNQ15631 228 aaKnown RBP11.32□□□□□ -0.6
SRP54-213ENST00000556994 AAK1Q2M2I8 961 aa11.32□□□□□ -0.6
SRP54-213ENST00000556994 CCNYL2Q5T2Q4 361 aa11.32□□□□□ -0.6
SRP54-213ENST00000556994 FAM171BQ6P995 826 aa11.32□□□□□ -0.6
SRP54-213ENST00000556994 SLC2A7Q6PXP3 512 aa11.32□□□□□ -0.6
SRP54-213ENST00000556994 PAQR3Q6TCH7 311 aa11.32□□□□□ -0.6
SRP54-213ENST00000556994 USP51Q70EK9 711 aa11.32□□□□□ -0.6
SRP54-213ENST00000556994 CIR1Q86X95 450 aaPredicted RBP11.32□□□□□ -0.6
SRP54-213ENST00000556994 FBXO39Q8N4B4 442 aa11.32□□□□□ -0.6
SRP54-213ENST00000556994 TTC16Q8NEE8 873 aa11.32□□□□□ -0.6
SRP54-213ENST00000556994 OR2T11Q8NH01 316 aa11.32□□□□□ -0.6
SRP54-213ENST00000556994 SNX19Q92543 992 aa11.32□□□□□ -0.6
SRP54-213ENST00000556994 PPP1R2P1Q96PQ5 205 aa11.32□□□□□ -0.6
SRP54-213ENST00000556994 HBEGFQ99075 208 aa11.32□□□□□ -0.6
SRP54-213ENST00000556994 SP110Q9HB58 689 aa11.32□□□□□ -0.6
SRP54-213ENST00000556994 PFDN4Q9NQP4 134 aa11.32□□□□□ -0.6
SRP54-213ENST00000556994 CPA4Q9UI42 421 aa11.32□□□□□ -0.6
SRP54-213ENST00000556994 ZNF225Q9UK10 706 aa11.32□□□□□ -0.6
SRP54-213ENST00000556994 KANSL1LA0AUZ9 987 aa11.31□□□□□ -0.6
SRP54-213ENST00000556994 FUOMA2VDF0 154 aa11.31□□□□□ -0.6
SRP54-213ENST00000556994 CDC7O00311 574 aa11.31□□□□□ -0.6
SRP54-213ENST00000556994 SYNCRIPO60506 623 aaKnown RBP11.31□□□□□ -0.6
SRP54-213ENST00000556994 NOL3O60936 208 aaKnown RBP11.31□□□□□ -0.6
SRP54-213ENST00000556994 CBFA2T3O75081 653 aa11.31□□□□□ -0.6
SRP54-213ENST00000556994 SLC22A3O75751 556 aa11.31□□□□□ -0.6
SRP54-213ENST00000556994 CTSHP09668 335 aa11.31□□□□□ -0.6
SRP54-213ENST00000556994 OR4Q2P0C623 313 aa11.31□□□□□ -0.6
SRP54-213ENST00000556994 ATXN1LP0C7T5 689 aaKnown RBP11.31□□□□□ -0.6
SRP54-213ENST00000556994 CCNA2P20248 432 aa11.31□□□□□ -0.6
SRP54-213ENST00000556994 FUT4P22083 530 aa11.31□□□□□ -0.6
SRP54-213ENST00000556994 TTKP33981 857 aa11.31□□□□□ -0.6
SRP54-213ENST00000556994 SLC26A3P40879 764 aa11.31□□□□□ -0.6
SRP54-213ENST00000556994 HLCSP50747 726 aa11.31□□□□□ -0.6
SRP54-213ENST00000556994 MLLT10P55197 1068 aa11.31□□□□□ -0.6
SRP54-213ENST00000556994 MLLT6P55198 1093 aaPredicted RBP11.31□□□□□ -0.6
SRP54-213ENST00000556994 YWHAHQ04917 246 aaPredicted RBP11.31□□□□□ -0.6
SRP54-213ENST00000556994 PIGFQ07326 219 aa11.31□□□□□ -0.6
SRP54-213ENST00000556994 LCP2Q13094 533 aa11.31□□□□□ -0.6
SRP54-213ENST00000556994 RCAN2Q14206 197 aa11.31□□□□□ -0.6
SRP54-213ENST00000556994 SELPLGQ14242 412 aa11.31□□□□□ -0.6
SRP54-213ENST00000556994 UPP1Q16831 310 aa11.31□□□□□ -0.6
SRP54-213ENST00000556994 GLYATQ6IB77 296 aa11.31□□□□□ -0.6
SRP54-213ENST00000556994 GALNT18Q6P9A2 607 aa11.31□□□□□ -0.6
SRP54-213ENST00000556994 PTRH1Q86Y79 214 aaKnown RBP11.31□□□□□ -0.6
SRP54-213ENST00000556994 SCN4BQ8IWT1 228 aa11.31□□□□□ -0.6
SRP54-213ENST00000556994 ERLEC1Q96DZ1 483 aa11.31□□□□□ -0.6
SRP54-213ENST00000556994 GLT1D1Q96MS3 346 aa11.31□□□□□ -0.6
SRP54-213ENST00000556994 ASB2Q96Q27 587 aa11.31□□□□□ -0.6
SRP54-213ENST00000556994 CSF3RQ99062 836 aa11.31□□□□□ -0.6
SRP54-213ENST00000556994 LHPPQ9H008 270 aa11.31□□□□□ -0.6
SRP54-213ENST00000556994 ING2Q9H160 280 aa11.31□□□□□ -0.6
SRP54-213ENST00000556994 SMOC2Q9H3U7 446 aa11.31□□□□□ -0.6
SRP54-213ENST00000556994 NTN4Q9HB63 628 aa11.31□□□□□ -0.6
SRP54-213ENST00000556994 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.31□□□□□ -0.6
SRP54-213ENST00000556994 GALPQ9UBC7 116 aa11.31□□□□□ -0.6
SRP54-213ENST00000556994 ST3GAL5Q9UNP4 418 aa11.31□□□□□ -0.6
SRP54-213ENST00000556994 ECI2O75521 394 aa11.31□□□□□ -0.6
SRP54-213ENST00000556994 PORP16435 677 aaPredicted RBP11.31□□□□□ -0.6
SRP54-213ENST00000556994 IL7RP16871 459 aa11.31□□□□□ -0.6
SRP54-213ENST00000556994 POLR2JP52435 117 aaKnown RBP11.31□□□□□ -0.6
SRP54-213ENST00000556994 IST1P53990 364 aa11.31□□□□□ -0.6
SRP54-213ENST00000556994 RELAQ04206 551 aa11.31□□□□□ -0.6
SRP54-213ENST00000556994 PPP1R8Q12972 351 aaKnown RBP11.31□□□□□ -0.6
SRP54-213ENST00000556994 ITGADQ13349 1161 aa11.31□□□□□ -0.6
SRP54-213ENST00000556994 BFSP2Q13515 415 aa11.31□□□□□ -0.6
SRP54-213ENST00000556994 NR1D2Q14995 579 aa11.31□□□□□ -0.6
SRP54-213ENST00000556994 MOGQ16653 247 aa11.31□□□□□ -0.6
SRP54-213ENST00000556994 GRAMD4Q6IC98 578 aa11.31□□□□□ -0.6
SRP54-213ENST00000556994 AGMOQ6ZNB7 445 aa11.31□□□□□ -0.6
SRP54-213ENST00000556994 ZNF467Q7Z7K2 595 aaPredicted RBP11.31□□□□□ -0.6
SRP54-213ENST00000556994 SYVN1Q86TM6 617 aa11.31□□□□□ -0.6
SRP54-213ENST00000556994 TLK2Q86UE8 772 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms