RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 AAR2Q9Y312 384 aaKnown RBP4.52□□□□□ -1.69
SRP54-212ENST00000556992 HS3ST4Q9Y661 456 aa4.52□□□□□ -1.69
SRP54-212ENST00000556992 MAD1L1Q9Y6D9 718 aa4.52□□□□□ -1.69
SRP54-212ENST00000556992 PRUNE2Q8WUY3 3088 aa4.52□□□□□ -1.69
SRP54-212ENST00000556992 CENPVL1A0A0U1RR11 272 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 TCRBV9S1A1TA0A576 114 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 TCRBV16S1A1N1A0A5B0 115 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 TMEM120BA0PK00 339 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 ERICH4A6NGS2 130 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 DRGXA6NNA5 263 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 SLC38A8A6NNN8 435 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 PRPF4O43172 522 aaKnown RBP eCLIP4.51□□□□□ -1.69
SRP54-212ENST00000556992 FAM155BO75949 473 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 KRT38O76015 456 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 ANXA9O76027 345 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 ALDH1A2O94788 518 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 TMEM63AO94886 807 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 SUN1O94901 812 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 TIMP1P01033 207 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 JCHAINP01591 159 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 POLBP06746 335 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 INHBAP08476 426 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 SNRPAP09012 282 aaKnown RBP4.51□□□□□ -1.69
SRP54-212ENST00000556992 CLTBP09497 229 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 ZDHHC11BP0C7U3 371 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 CCNB1P14635 433 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 CHN1P15882 459 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 PGAM1P18669 254 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 PRKCHP24723 683 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 PTPN3P26045 913 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 CNTFP26441 200 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 SSTR1P30872 391 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 HOXC13P31276 330 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 OR1D2P34982 312 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 ATP5C1P36542 298 aaKnown RBP4.51□□□□□ -1.69
SRP54-212ENST00000556992 GARSP41250 739 aaKnown RBP4.51□□□□□ -1.69
SRP54-212ENST00000556992 MAGEA3P43357 314 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 ALDH1A3P47895 512 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 IFNAR2P48551 515 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 SLC11A2P49281 568 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 CLK3P49761 638 aaKnown RBP4.51□□□□□ -1.69
SRP54-212ENST00000556992 SERPINB9P50453 376 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 RENBPP51606 427 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 SEC24CP53992 1094 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 HNRNPH2P55795 449 aaKnown RBP4.51□□□□□ -1.69
SRP54-212ENST00000556992 IL9RQ01113 521 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 CREMQ03060 361 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 ROM1Q03395 351 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 GAD2Q05329 585 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 TAF10Q12962 218 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 DNAJC3Q13217 504 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 NAB1Q13506 487 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 FRG1Q14331 258 aaKnown RBP4.51□□□□□ -1.69
SRP54-212ENST00000556992 FASTKD3Q14CZ7 662 aaKnown RBP4.51□□□□□ -1.69
SRP54-212ENST00000556992 SEPT7Q16181 437 aaKnown RBP4.51□□□□□ -1.69
SRP54-212ENST00000556992 TAF12Q16514 161 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 ANO4Q32M45 955 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 MGAT5BQ3V5L5 792 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 TRIM60Q495X7 471 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 GAGE13Q4V321 117 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 C10orf120Q5SQS8 335 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 SPOUT1Q5T280 376 aaKnown RBP4.51□□□□□ -1.69
SRP54-212ENST00000556992 GKAP1Q5VSY0 366 aaPredicted RBP4.51□□□□□ -1.69
SRP54-212ENST00000556992 SNX30Q5VWJ9 437 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 TIGD7Q6NT04 549 aaPredicted RBP4.51□□□□□ -1.69
SRP54-212ENST00000556992 FBXO46Q6PJ61 603 aaPredicted RBP4.51□□□□□ -1.69
SRP54-212ENST00000556992 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.51□□□□□ -1.696e-6■■■□□ 19.1
SRP54-212ENST00000556992 TAS1R1Q7RTX1 841 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 DDX53Q86TM3 631 aaKnown RBP4.51□□□□□ -1.69
SRP54-212ENST00000556992 TRABD2AQ86V40 505 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 LRRC6Q86X45 466 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 PRIMA1Q86XR5 153 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 SRRM1Q8IYB3 904 aaKnown RBP4.51□□□□□ -1.69
SRP54-212ENST00000556992 ZNF567Q8N184 647 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 UMODL1-AS1Q8N2C9 162 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 TMEM199Q8N511 208 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 STKLD1Q8NE28 680 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 NSMCE1Q8WV22 266 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 SLC44A1Q8WWI5 657 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 ST8SIA2Q92186 375 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 CDKL2Q92772 493 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 CASP10Q92851 521 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 FATE1Q969F0 183 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 FBXO32Q969P5 355 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 AZIN2Q96A70 460 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 TTC17Q96AE7 1141 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 ARMC5Q96C12 935 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 GRAMD1AQ96CP6 724 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 HDAC11Q96DB2 347 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 MTBPQ96DY7 904 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 STAMBPL1Q96FJ0 436 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 SLC39A13Q96H72 371 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 BTN2A3PQ96KV6 586 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 ZNF558Q96NG5 402 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 PGLYRP2Q96PD5 576 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 SEPT5Q99719 369 aaPredicted RBP4.51□□□□□ -1.69
SRP54-212ENST00000556992 BOCQ9BWV1 1114 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 TTLL2Q9BWV7 592 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 ZYG11BQ9C0D3 744 aa4.51□□□□□ -1.69
SRP54-212ENST00000556992 PRO3102Q9H379 93 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms