RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 CBWD6Q4V339 395 aa5.23□□□□□ -1.57
SRP54-211ENST00000556445 CBWD3Q5JTY5 395 aa5.23□□□□□ -1.57
SRP54-211ENST00000556445 CBWD5Q5RIA9 395 aa5.23□□□□□ -1.57
SRP54-211ENST00000556445 TEX35Q5T0J7 233 aa5.23□□□□□ -1.57
SRP54-211ENST00000556445 GARNL3Q5VVW2 1013 aa5.23□□□□□ -1.57
SRP54-211ENST00000556445 DPY19L2P1Q6NXN4 242 aa5.23□□□□□ -1.57
SRP54-211ENST00000556445 MTFR2Q6P444 385 aa5.23□□□□□ -1.57
SRP54-211ENST00000556445 MOB2Q70IA6 237 aa5.23□□□□□ -1.57
SRP54-211ENST00000556445 ARMCX2Q7L311 632 aa5.23□□□□□ -1.57
SRP54-211ENST00000556445 TRMT1LQ7Z2T5 733 aaKnown RBP5.23□□□□□ -1.57
SRP54-211ENST00000556445 ZNF677Q86XU0 584 aa5.23□□□□□ -1.57
SRP54-211ENST00000556445 RNF168Q8IYW5 571 aaPredicted RBP5.23□□□□□ -1.57
SRP54-211ENST00000556445 SCML4Q8N228 414 aa5.23□□□□□ -1.57
SRP54-211ENST00000556445 SLC44A3Q8N4M1 653 aa5.23□□□□□ -1.57
SRP54-211ENST00000556445 OR6B3Q8NGW1 331 aa5.23□□□□□ -1.57
SRP54-211ENST00000556445 PPTC7Q8NI37 304 aa5.23□□□□□ -1.57
SRP54-211ENST00000556445 FBXO30Q8TB52 745 aa5.23□□□□□ -1.57
SRP54-211ENST00000556445 CAGE1Q8TC20 777 aa5.23□□□□□ -1.57
SRP54-211ENST00000556445 BRIX1Q8TDN6 353 aaKnown RBP5.23□□□□□ -1.57
SRP54-211ENST00000556445 GRK7Q8WTQ7 553 aa5.23□□□□□ -1.57
SRP54-211ENST00000556445 ZFAND2BQ8WV99 257 aa5.23□□□□□ -1.57
SRP54-211ENST00000556445 CTNNBL1Q8WYA6 563 aaPredicted RBP5.23□□□□□ -1.57
SRP54-211ENST00000556445 KTI12Q96EK9 354 aaPredicted RBP5.23□□□□□ -1.57
SRP54-211ENST00000556445 KLHL32Q96NJ5 620 aa5.23□□□□□ -1.57
SRP54-211ENST00000556445 TRAPPC9Q96Q05 1148 aa5.23□□□□□ -1.57
SRP54-211ENST00000556445 VRK1Q99986 396 aaPredicted RBP5.23□□□□□ -1.57
SRP54-211ENST00000556445 NFKBIZQ9BYH8 718 aa5.23□□□□□ -1.57
SRP54-211ENST00000556445 IMPG2Q9BZV3 1241 aa5.23□□□□□ -1.57
SRP54-211ENST00000556445 TP63Q9H3D4 680 aaPredicted RBP5.23□□□□□ -1.57
SRP54-211ENST00000556445 COPS7BQ9H9Q2 264 aaPredicted RBP5.23□□□□□ -1.57
SRP54-211ENST00000556445 TXNRD2Q9NNW7 524 aa5.23□□□□□ -1.57
SRP54-211ENST00000556445 G6PC2Q9NQR9 355 aa5.23□□□□□ -1.57
SRP54-211ENST00000556445 DKK3Q9UBP4 350 aa5.23□□□□□ -1.57
SRP54-211ENST00000556445 TESQ9UGI8 421 aaKnown RBP5.23□□□□□ -1.57
SRP54-211ENST00000556445 AGO2Q9UKV8 859 aaKnown RBP5.23□□□□□ -1.57
SRP54-211ENST00000556445 HSF4Q9ULV5 492 aa5.23□□□□□ -1.57
SRP54-211ENST00000556445 SLC45A2Q9UMX9 530 aa5.23□□□□□ -1.57
SRP54-211ENST00000556445 LYVE1Q9Y5Y7 322 aa5.23□□□□□ -1.57
SRP54-211ENST00000556445 PLXNA1Q9UIW2 1896 aa5.23□□□□□ -1.57
SRP54-211ENST00000556445 MYH10P35580 1976 aa5.23□□□□□ -1.57
SRP54-211ENST00000556445 PLXNB2O15031 1838 aa5.23□□□□□ -1.57
SRP54-211ENST00000556445 TRPM7Q96QT4 1865 aa5.22□□□□□ -1.57
SRP54-211ENST00000556445 A0A087X0T9 212 aa5.22□□□□□ -1.57
SRP54-211ENST00000556445 A0A0U1RQK1 487 aa5.22□□□□□ -1.57
SRP54-211ENST00000556445 ARHGAP10A1A4S6 786 aa5.22□□□□□ -1.57
SRP54-211ENST00000556445 ZNF320A2RRD8 509 aa5.22□□□□□ -1.57
SRP54-211ENST00000556445 CCDC151A5D8V7 595 aa5.22□□□□□ -1.57
SRP54-211ENST00000556445 TMEM150BA6NC51 233 aa5.22□□□□□ -1.57
SRP54-211ENST00000556445 FAM25EA8MYX2 175 aa5.22□□□□□ -1.57
SRP54-211ENST00000556445 ANKRD63C9JTQ0 380 aa5.22□□□□□ -1.57
SRP54-211ENST00000556445 TAF4O00268 1085 aa5.22□□□□□ -1.57
SRP54-211ENST00000556445 ZNF263O14978 683 aa5.22□□□□□ -1.57
SRP54-211ENST00000556445 CLDN3O15551 220 aa5.22□□□□□ -1.57
SRP54-211ENST00000556445 ZBTB14O43829 449 aa5.22□□□□□ -1.57
SRP54-211ENST00000556445 KERAO60938 352 aa5.22□□□□□ -1.57
SRP54-211ENST00000556445 TOM1L1O75674 476 aa5.22□□□□□ -1.57
SRP54-211ENST00000556445 CELF2O95319 508 aaKnown RBP5.22□□□□□ -1.57
SRP54-211ENST00000556445 NUDT3O95989 172 aa5.22□□□□□ -1.57
SRP54-211ENST00000556445 PGK2P07205 417 aa5.22□□□□□ -1.57
SRP54-211ENST00000556445 FAM228BP0C875 321 aa5.22□□□□□ -1.57
SRP54-211ENST00000556445 TMIGD3P0DMS9 266 aaPredicted RBP5.22□□□□□ -1.57
SRP54-211ENST00000556445 GZMAP12544 262 aa5.22□□□□□ -1.57
SRP54-211ENST00000556445 EGR1P18146 543 aa5.22□□□□□ -1.57
SRP54-211ENST00000556445 TNNI1P19237 187 aa5.22□□□□□ -1.57
SRP54-211ENST00000556445 GLRA2P23416 452 aa5.22□□□□□ -1.57
SRP54-211ENST00000556445 ADSSP30520 456 aa5.22□□□□□ -1.57
SRP54-211ENST00000556445 GRK5P34947 590 aa5.22□□□□□ -1.57
SRP54-211ENST00000556445 PLA2G5P39877 138 aa5.22□□□□□ -1.57
SRP54-211ENST00000556445 GCLMP48507 274 aa5.22□□□□□ -1.57
SRP54-211ENST00000556445 RPS3AP61247 264 aaKnown RBP5.22□□□□□ -1.57
SRP54-211ENST00000556445 GFPT1Q06210 699 aaPredicted RBP5.22□□□□□ -1.57
SRP54-211ENST00000556445 GRB14Q14449 540 aa5.22□□□□□ -1.57
SRP54-211ENST00000556445 SEC23BQ15437 767 aa5.22□□□□□ -1.57
SRP54-211ENST00000556445 MAPKAPK3Q16644 382 aa5.22□□□□□ -1.57
SRP54-211ENST00000556445 FAM187BQ17R55 369 aa5.22□□□□□ -1.57
SRP54-211ENST00000556445 ERCC6LQ2NKX8 1250 aa5.22□□□□□ -1.57
SRP54-211ENST00000556445 C2orf76Q3KRA6 126 aa5.22□□□□□ -1.57
SRP54-211ENST00000556445 CFAP221Q4G0U5 840 aa5.22□□□□□ -1.57
SRP54-211ENST00000556445 GLE1Q53GS7 698 aaKnown RBP5.22□□□□□ -1.57
SRP54-211ENST00000556445 TMTC4Q5T4D3 741 aa5.22□□□□□ -1.57
SRP54-211ENST00000556445 DEPDC1Q5TB30 811 aa5.22□□□□□ -1.57
SRP54-211ENST00000556445 NAA35Q5VZE5 725 aa5.22□□□□□ -1.57
SRP54-211ENST00000556445 INO80CQ6PI98 192 aaPredicted RBP5.22□□□□□ -1.57
SRP54-211ENST00000556445 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.22□□□□□ -1.57
SRP54-211ENST00000556445 KIAA0408Q6ZU52 694 aa5.22□□□□□ -1.57
SRP54-211ENST00000556445 IKBIPQ70UQ0 350 aa5.22□□□□□ -1.57
SRP54-211ENST00000556445 ZNF365Q70YC5 407 aa5.22□□□□□ -1.57
SRP54-211ENST00000556445 ZNF571Q7Z3V5 609 aaPredicted RBP5.22□□□□□ -1.57
SRP54-211ENST00000556445 GPR142Q7Z601 462 aa5.22□□□□□ -1.57
SRP54-211ENST00000556445 PPP1R3BQ86XI6 285 aa5.22□□□□□ -1.57
SRP54-211ENST00000556445 PRIMA1Q86XR5 153 aa5.22□□□□□ -1.57
SRP54-211ENST00000556445 ANKRD13CQ8N6S4 541 aa5.22□□□□□ -1.57
SRP54-211ENST00000556445 LMO3Q8TAP4 145 aa5.22□□□□□ -1.57
SRP54-211ENST00000556445 HSPH1Q92598 858 aa5.22□□□□□ -1.57
SRP54-211ENST00000556445 TMEM143Q96AN5 459 aa5.22□□□□□ -1.57
SRP54-211ENST00000556445 ZNF653Q96CK0 615 aa5.22□□□□□ -1.57
SRP54-211ENST00000556445 PGAP3Q96FM1 320 aaPredicted RBP5.22□□□□□ -1.57
SRP54-211ENST00000556445 APOPT1Q96IL0 206 aa5.22□□□□□ -1.57
SRP54-211ENST00000556445 PBKQ96KB5 322 aa5.22□□□□□ -1.57
SRP54-211ENST00000556445 RUNDC3BQ96NL0 473 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms