RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 ASMTLO95671 621 aa14.19□□□□□ -0.14
CHMP4BP1-201ENST00000556017 PYGLP06737 847 aa14.19□□□□□ -0.14
CHMP4BP1-201ENST00000556017 ANKRD34CP0C6C1 535 aa14.19□□□□□ -0.14
CHMP4BP1-201ENST00000556017 FAM228BP0C875 321 aa14.19□□□□□ -0.14
CHMP4BP1-201ENST00000556017 ACP5P13686 325 aa14.19□□□□□ -0.14
CHMP4BP1-201ENST00000556017 PBX1P40424 430 aa14.19□□□□□ -0.14
CHMP4BP1-201ENST00000556017 EPHA4P54764 986 aa14.19□□□□□ -0.14
CHMP4BP1-201ENST00000556017 GBE1Q04446 702 aa14.19□□□□□ -0.14
CHMP4BP1-201ENST00000556017 ABHD18Q0P651 414 aa14.19□□□□□ -0.14
CHMP4BP1-201ENST00000556017 CRTC2Q53ET0 693 aaPredicted RBP14.19□□□□□ -0.14
CHMP4BP1-201ENST00000556017 LYSMD3Q7Z3D4 306 aa14.19□□□□□ -0.14
CHMP4BP1-201ENST00000556017 NSMCE1Q8WV22 266 aa14.19□□□□□ -0.14
CHMP4BP1-201ENST00000556017 STARD8Q92502 1023 aa14.19□□□□□ -0.14
CHMP4BP1-201ENST00000556017 ABHD17AQ96GS6 310 aa14.19□□□□□ -0.14
CHMP4BP1-201ENST00000556017 AHCYL2Q96HN2 611 aaKnown RBP14.19□□□□□ -0.14
CHMP4BP1-201ENST00000556017 PLEKHG4BQ96PX9 1271 aa14.19□□□□□ -0.14
CHMP4BP1-201ENST00000556017 TRIB3Q96RU7 358 aa14.19□□□□□ -0.14
CHMP4BP1-201ENST00000556017 BRD8Q9H0E9 1235 aa14.19□□□□□ -0.14
CHMP4BP1-201ENST00000556017 GPN2Q9H9Y4 310 aaPredicted RBP14.19□□□□□ -0.14
CHMP4BP1-201ENST00000556017 PCDH9Q9HC56 1237 aa14.19□□□□□ -0.14
CHMP4BP1-201ENST00000556017 ARFGAP3Q9NP61 516 aa14.19□□□□□ -0.14
CHMP4BP1-201ENST00000556017 ANKMY1Q9P2S6 941 aa14.19□□□□□ -0.14
CHMP4BP1-201ENST00000556017 ATXN10Q9UBB4 475 aa14.19□□□□□ -0.14
CHMP4BP1-201ENST00000556017 CPNE7Q9UBL6 633 aa14.19□□□□□ -0.14
CHMP4BP1-201ENST00000556017 AMACRQ9UHK6 382 aa14.19□□□□□ -0.14
CHMP4BP1-201ENST00000556017 SLC30A1Q9Y6M5 507 aa14.19□□□□□ -0.14
CHMP4BP1-201ENST00000556017 TNRC6AQ8NDV7 1962 aaKnown RBP14.19□□□□□ -0.14
CHMP4BP1-201ENST00000556017 SPTBN1Q01082 2364 aaKnown RBP14.18□□□□□ -0.14
CHMP4BP1-201ENST00000556017 PRRC2CQ9Y520 2896 aaKnown RBP14.18□□□□□ -0.14
CHMP4BP1-201ENST00000556017 LILRA5A6NI73 299 aa14.18□□□□□ -0.14
CHMP4BP1-201ENST00000556017 ANKRD66B4E2M5 251 aa14.18□□□□□ -0.14
CHMP4BP1-201ENST00000556017 ZNF8P17098 575 aaPredicted RBP14.18□□□□□ -0.14
CHMP4BP1-201ENST00000556017 CCNCP24863 283 aa14.18□□□□□ -0.14
CHMP4BP1-201ENST00000556017 ZNF165P49910 485 aa14.18□□□□□ -0.14
CHMP4BP1-201ENST00000556017 CLCNKAP51800 687 aa14.18□□□□□ -0.14
CHMP4BP1-201ENST00000556017 TAS2R40P59535 323 aa14.18□□□□□ -0.14
CHMP4BP1-201ENST00000556017 RPL26P61254 145 aaKnown RBP14.18□□□□□ -0.14
CHMP4BP1-201ENST00000556017 ITKQ08881 620 aa14.18□□□□□ -0.14
CHMP4BP1-201ENST00000556017 ZBTB17Q13105 803 aa14.18□□□□□ -0.14
CHMP4BP1-201ENST00000556017 UBAP2LQ14157 1087 aaKnown RBP14.18□□□□□ -0.14
CHMP4BP1-201ENST00000556017 IQCB1Q15051 598 aa14.18□□□□□ -0.14
CHMP4BP1-201ENST00000556017 KHDC1Q4VXA5 237 aaKnown RBP14.18□□□□□ -0.14
CHMP4BP1-201ENST00000556017 ANKRD20A8PQ5CZ79 823 aa14.18□□□□□ -0.14
CHMP4BP1-201ENST00000556017 FIGNQ5HY92 759 aa14.18□□□□□ -0.14
CHMP4BP1-201ENST00000556017 CEACAM20Q6UY09 585 aa14.18□□□□□ -0.14
CHMP4BP1-201ENST00000556017 GPR26Q8NDV2 337 aa14.18□□□□□ -0.14
CHMP4BP1-201ENST00000556017 LPCAT1Q8NF37 534 aa14.18□□□□□ -0.14
CHMP4BP1-201ENST00000556017 C9orf43Q8TAL5 461 aaPredicted RBP14.18□□□□□ -0.14
CHMP4BP1-201ENST00000556017 ZPBPQ9BS86 351 aa14.18□□□□□ -0.14
CHMP4BP1-201ENST00000556017 HERPUD2Q9BSE4 406 aa14.18□□□□□ -0.14
CHMP4BP1-201ENST00000556017 NUP85Q9BW27 656 aa14.18□□□□□ -0.14
CHMP4BP1-201ENST00000556017 FAM83DQ9H4H8 585 aa14.18□□□□□ -0.14
CHMP4BP1-201ENST00000556017 ZNF624Q9P2J8 865 aaPredicted RBP14.18□□□□□ -0.14
CHMP4BP1-201ENST00000556017 KLHL3Q9UH77 587 aa14.18□□□□□ -0.14
CHMP4BP1-201ENST00000556017 IP6K2Q9UHH9 426 aa14.18□□□□□ -0.14
CHMP4BP1-201ENST00000556017 ANAPC2Q9UJX6 822 aa14.18□□□□□ -0.14
CHMP4BP1-201ENST00000556017 TMPRSS11EQ9UL52 423 aa14.18□□□□□ -0.14
CHMP4BP1-201ENST00000556017 RPL26L1Q9UNX3 145 aaKnown RBP14.18□□□□□ -0.14
CHMP4BP1-201ENST00000556017 ICE1Q9Y2F5 2266 aa14.18□□□□□ -0.14
CHMP4BP1-201ENST00000556017 KIR2DS5A0A0G2JLQ3 304 aa14.17□□□□□ -0.14
CHMP4BP1-201ENST00000556017 A0A0G2JNG1 304 aa14.17□□□□□ -0.14
CHMP4BP1-201ENST00000556017 C1orf232A0A0U1RR37 186 aa14.17□□□□□ -0.14
CHMP4BP1-201ENST00000556017 KIR2DS3K7RE56 304 aa14.17□□□□□ -0.14
CHMP4BP1-201ENST00000556017 CHUKO15111 745 aa14.17□□□□□ -0.14
CHMP4BP1-201ENST00000556017 GRID2O43424 1007 aa14.17□□□□□ -0.14
CHMP4BP1-201ENST00000556017 BRAFP15056 766 aa14.17□□□□□ -0.14
CHMP4BP1-201ENST00000556017 NR1D1P20393 614 aa14.17□□□□□ -0.14
CHMP4BP1-201ENST00000556017 CES1P23141 567 aa14.17□□□□□ -0.14
CHMP4BP1-201ENST00000556017 SLC19A1P41440 591 aa14.17□□□□□ -0.14
CHMP4BP1-201ENST00000556017 EPHB1P54762 984 aa14.17□□□□□ -0.14
CHMP4BP1-201ENST00000556017 SH3BP2P78314 561 aa14.17□□□□□ -0.14
CHMP4BP1-201ENST00000556017 MAP7Q14244 749 aa14.17□□□□□ -0.14
CHMP4BP1-201ENST00000556017 KIR2DS5Q14953 304 aa14.17□□□□□ -0.14
CHMP4BP1-201ENST00000556017 IFI16Q16666 785 aaKnown RBP14.17□□□□□ -0.14
CHMP4BP1-201ENST00000556017 DEFB109BQ30KR1 87 aa14.17□□□□□ -0.14
CHMP4BP1-201ENST00000556017 CCDC183Q5T5S1 534 aa14.17□□□□□ -0.14
CHMP4BP1-201ENST00000556017 ZNF547Q8IVP9 402 aa14.17□□□□□ -0.14
CHMP4BP1-201ENST00000556017 NDUFAF2Q8N183 169 aa14.17□□□□□ -0.14
CHMP4BP1-201ENST00000556017 APOBEC4Q8WW27 367 aaKnown RBP14.17□□□□□ -0.14
CHMP4BP1-201ENST00000556017 TADA1Q96BN2 335 aa14.17□□□□□ -0.14
CHMP4BP1-201ENST00000556017 C9orf72Q96LT7 481 aa14.17□□□□□ -0.14
CHMP4BP1-201ENST00000556017 ZNF670Q9BS34 389 aa14.17□□□□□ -0.14
CHMP4BP1-201ENST00000556017 CARD9Q9H257 536 aa14.17□□□□□ -0.14
CHMP4BP1-201ENST00000556017 RMI1Q9H9A7 625 aa14.17□□□□□ -0.14
CHMP4BP1-201ENST00000556017 UCK1Q9HA47 277 aa14.17□□□□□ -0.14
CHMP4BP1-201ENST00000556017 KCNMB2Q9Y691 235 aa14.17□□□□□ -0.14
CHMP4BP1-201ENST00000556017 UNC79Q9P2D8 2635 aa14.16□□□□□ -0.14
CHMP4BP1-201ENST00000556017 KCNK1O00180 336 aa14.16□□□□□ -0.14
CHMP4BP1-201ENST00000556017 POLR1CO15160 346 aaPredicted RBP14.16□□□□□ -0.14
CHMP4BP1-201ENST00000556017 SNX2O60749 519 aa14.16□□□□□ -0.14
CHMP4BP1-201ENST00000556017 XRCC1P18887 633 aaPredicted RBP14.16□□□□□ -0.14
CHMP4BP1-201ENST00000556017 CD86P42081 329 aa14.16□□□□□ -0.14
CHMP4BP1-201ENST00000556017 MAPK9P45984 424 aa14.16□□□□□ -0.14
CHMP4BP1-201ENST00000556017 LEPRP48357 1165 aaKnown RBP14.16□□□□□ -0.14
CHMP4BP1-201ENST00000556017 KRT81Q14533 505 aa14.16□□□□□ -0.14
CHMP4BP1-201ENST00000556017 TMEM26Q6ZUK4 368 aa14.16□□□□□ -0.14
CHMP4BP1-201ENST00000556017 C11orf96Q7Z7L8 435 aa14.16□□□□□ -0.14
CHMP4BP1-201ENST00000556017 ADGRG6Q86SQ4 1221 aa14.16□□□□□ -0.14
CHMP4BP1-201ENST00000556017 SLC9B2Q86UD5 537 aa14.16□□□□□ -0.14
CHMP4BP1-201ENST00000556017 SH3KBP1Q96B97 665 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms