RNA–Protein interactions for RNA: ENST00000555985.5

LINC00648-202, long intergenic non-protein coding RNA 648, humanhuman

TSL 2 BASIC

Gene LINC00648, Length 2,885 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-202ENST00000555985 WSCD2Q2TBF2 565 aa3.9□□□□□ -1.78
LINC00648-202ENST00000555985 POM121L1PQ3SYA9 428 aa3.9□□□□□ -1.78
LINC00648-202ENST00000555985 WASHC2DQ5SRD0 308 aa3.9□□□□□ -1.78
LINC00648-202ENST00000555985 MEI1Q5TIA1 1274 aa3.9□□□□□ -1.78
LINC00648-202ENST00000555985 ESRP1Q6NXG1 681 aaKnown RBP3.9□□□□□ -1.78
LINC00648-202ENST00000555985 LAYNQ6UX15 382 aa3.9□□□□□ -1.78
LINC00648-202ENST00000555985 CCDC80Q76M96 950 aa3.9□□□□□ -1.78
LINC00648-202ENST00000555985 ZNF765Q7L2R6 523 aa3.9□□□□□ -1.78
LINC00648-202ENST00000555985 TMC3Q7Z5M5 1100 aa3.9□□□□□ -1.78
LINC00648-202ENST00000555985 RAB44Q7Z6P3 723 aaPredicted RBP3.9□□□□□ -1.78
LINC00648-202ENST00000555985 HOOK3Q86VS8 718 aa3.9□□□□□ -1.78
LINC00648-202ENST00000555985 DCP2Q8IU60 420 aaKnown RBP3.9□□□□□ -1.78
LINC00648-202ENST00000555985 NAXDQ8IW45 347 aa3.9□□□□□ -1.78
LINC00648-202ENST00000555985 KLHL7Q8IXQ5 586 aa3.9□□□□□ -1.78
LINC00648-202ENST00000555985 SLC25A45Q8N413 288 aa3.9□□□□□ -1.78
LINC00648-202ENST00000555985 SLC35B2Q8TB61 432 aa3.9□□□□□ -1.78
LINC00648-202ENST00000555985 DTX3LQ8TDB6 740 aa3.9□□□□□ -1.78
LINC00648-202ENST00000555985 SCRN2Q96FV2 425 aa3.9□□□□□ -1.78
LINC00648-202ENST00000555985 PGM2Q96G03 612 aa3.9□□□□□ -1.78
LINC00648-202ENST00000555985 HIC2Q96JB3 615 aa3.9□□□□□ -1.78
LINC00648-202ENST00000555985 SERAC1Q96JX3 654 aa3.9□□□□□ -1.78
LINC00648-202ENST00000555985 TEKT5Q96M29 485 aa3.9□□□□□ -1.78
LINC00648-202ENST00000555985 C19orf43Q9BQ61 176 aa3.9□□□□□ -1.78
LINC00648-202ENST00000555985 CCDC28BQ9BUN5 200 aa3.9□□□□□ -1.78
LINC00648-202ENST00000555985 CINPQ9BW66 212 aaPredicted RBP3.9□□□□□ -1.78
LINC00648-202ENST00000555985 SP110Q9HB58 689 aa3.9□□□□□ -1.78
LINC00648-202ENST00000555985 FAM114A2Q9NRY5 505 aa3.9□□□□□ -1.78
LINC00648-202ENST00000555985 NMRK1Q9NWW6 199 aa3.9□□□□□ -1.78
LINC00648-202ENST00000555985 PAIP2BQ9ULR5 123 aaKnown RBP3.9□□□□□ -1.78
LINC00648-202ENST00000555985 PHTF1Q9UMS5 762 aa3.9□□□□□ -1.78
LINC00648-202ENST00000555985 CA5BQ9Y2D0 317 aa3.9□□□□□ -1.78
LINC00648-202ENST00000555985 ARL2BPQ9Y2Y0 163 aa3.9□□□□□ -1.78
LINC00648-202ENST00000555985 ADAMTS20P59510 1910 aa3.9□□□□□ -1.78
LINC00648-202ENST00000555985 TBC1D3DA0A087WVF3 549 aa3.9□□□□□ -1.79
LINC00648-202ENST00000555985 TBC1D3IA0A087WXS9 549 aa3.9□□□□□ -1.79
LINC00648-202ENST00000555985 TBC1D3EA0A087X179 549 aa3.9□□□□□ -1.79
LINC00648-202ENST00000555985 TBC1D3KA0A087X1G2 549 aa3.9□□□□□ -1.79
LINC00648-202ENST00000555985 A0A0J9YYE9 177 aa3.9□□□□□ -1.79
LINC00648-202ENST00000555985 MED19A0JLT2 244 aaPredicted RBP3.9□□□□□ -1.79
LINC00648-202ENST00000555985 TBC1D3FA6NER0 549 aaPredicted RBP3.9□□□□□ -1.79
LINC00648-202ENST00000555985 CAPN8A6NHC0 703 aa3.9□□□□□ -1.79
LINC00648-202ENST00000555985 NPIPB15A6NHN6 443 aaPredicted RBP3.9□□□□□ -1.79
LINC00648-202ENST00000555985 TBC1D3LB9A6J9 549 aa3.9□□□□□ -1.79
LINC00648-202ENST00000555985 APOC4-APOC2K7ER74 178 aa3.9□□□□□ -1.79
LINC00648-202ENST00000555985 GIPC1O14908 333 aa3.9□□□□□ -1.79
LINC00648-202ENST00000555985 DAPK3O43293 454 aa3.9□□□□□ -1.79
LINC00648-202ENST00000555985 HNRNPRO43390 633 aaKnown RBP3.9□□□□□ -1.79
LINC00648-202ENST00000555985 TRBC1P01850 177 aa3.9□□□□□ -1.79
LINC00648-202ENST00000555985 APOC2P02655 101 aa3.9□□□□□ -1.79
LINC00648-202ENST00000555985 CSF2P04141 144 aa3.9□□□□□ -1.79
LINC00648-202ENST00000555985 ATXN1LP0C7T5 689 aaKnown RBP3.9□□□□□ -1.79
LINC00648-202ENST00000555985 TBC1D3HP0C7X1 549 aa3.9□□□□□ -1.79
LINC00648-202ENST00000555985 KRT10P13645 584 aa3.9□□□□□ -1.79
LINC00648-202ENST00000555985 C6P13671 934 aa3.9□□□□□ -1.79
LINC00648-202ENST00000555985 IDO1P14902 403 aa3.9□□□□□ -1.79
LINC00648-202ENST00000555985 NME1P15531 152 aaKnown RBP3.9□□□□□ -1.79
LINC00648-202ENST00000555985 MX2P20592 715 aa3.9□□□□□ -1.79
LINC00648-202ENST00000555985 VAMP1P23763 118 aa3.9□□□□□ -1.79
LINC00648-202ENST00000555985 SERPINA4P29622 427 aa3.9□□□□□ -1.79
LINC00648-202ENST00000555985 VIPR1P32241 457 aa3.9□□□□□ -1.79
LINC00648-202ENST00000555985 VHLP40337 213 aa3.9□□□□□ -1.79
LINC00648-202ENST00000555985 STC1P52823 247 aa3.9□□□□□ -1.79
LINC00648-202ENST00000555985 KIAA1024LP59773 190 aa3.9□□□□□ -1.79
LINC00648-202ENST00000555985 YPEL5P62699 121 aa3.9□□□□□ -1.79
LINC00648-202ENST00000555985 FOXK2Q01167 660 aa3.9□□□□□ -1.79
LINC00648-202ENST00000555985 OCRLQ01968 901 aa3.9□□□□□ -1.79
LINC00648-202ENST00000555985 DSC2Q02487 901 aa3.9□□□□□ -1.79
LINC00648-202ENST00000555985 ELP6Q0PNE2 266 aa3.9□□□□□ -1.79
LINC00648-202ENST00000555985 PTPRRQ15256 657 aa3.9□□□□□ -1.79
LINC00648-202ENST00000555985 IRF4Q15306 451 aa3.9□□□□□ -1.79
LINC00648-202ENST00000555985 KBTBD12Q3ZCT8 623 aa3.9□□□□□ -1.79
LINC00648-202ENST00000555985 CCDC92Q53HC0 331 aaPredicted RBP3.9□□□□□ -1.79
LINC00648-202ENST00000555985 TEX44Q53QW1 395 aa3.9□□□□□ -1.79
LINC00648-202ENST00000555985 MARC1Q5VT66 337 aa3.9□□□□□ -1.79
LINC00648-202ENST00000555985 KCTD11Q693B1 232 aa3.9□□□□□ -1.79
LINC00648-202ENST00000555985 TBC1D3GQ6DHY5 549 aa3.9□□□□□ -1.79
LINC00648-202ENST00000555985 TBC1D3CQ6IPX1 549 aa3.9□□□□□ -1.79
LINC00648-202ENST00000555985 AADACL2Q6P093 401 aa3.9□□□□□ -1.79
LINC00648-202ENST00000555985 XKR5Q6UX68 686 aa3.9□□□□□ -1.79
LINC00648-202ENST00000555985 NCCRP1Q6ZVX7 275 aaPredicted RBP3.9□□□□□ -1.79
LINC00648-202ENST00000555985 TBC1D3Q8IZP1 549 aaPredicted RBP3.9□□□□□ -1.79
LINC00648-202ENST00000555985 CACTIN-AS1Q8N1I8 211 aa3.9□□□□□ -1.79
LINC00648-202ENST00000555985 AGGF1Q8N302 714 aaeCLIP3.9□□□□□ -1.79
LINC00648-202ENST00000555985 ARL10Q8N8L6 244 aa3.9□□□□□ -1.79
LINC00648-202ENST00000555985 FAM181AQ8N9Y4 354 aa3.9□□□□□ -1.79
LINC00648-202ENST00000555985 C12orf50Q8NA57 414 aaPredicted RBP3.9□□□□□ -1.79
LINC00648-202ENST00000555985 FAM13CQ8NE31 585 aa3.9□□□□□ -1.79
LINC00648-202ENST00000555985 OR13H1Q8NG92 308 aa3.9□□□□□ -1.79
LINC00648-202ENST00000555985 LRRN4Q8WUT4 740 aa3.9□□□□□ -1.79
LINC00648-202ENST00000555985 COX14Q96I36 57 aa3.9□□□□□ -1.79
LINC00648-202ENST00000555985 ELF4Q99607 663 aaPredicted RBP3.9□□□□□ -1.79
LINC00648-202ENST00000555985 CALN1Q9BXU9 219 aa3.9□□□□□ -1.79
LINC00648-202ENST00000555985 TEX101Q9BY14 249 aa3.9□□□□□ -1.79
LINC00648-202ENST00000555985 SLC25A51Q9H1U9 297 aa3.9□□□□□ -1.79
LINC00648-202ENST00000555985 LRMDAQ9H2I8 198 aa3.9□□□□□ -1.79
LINC00648-202ENST00000555985 GAREM1Q9H706 876 aa3.9□□□□□ -1.79
LINC00648-202ENST00000555985 CAAP1Q9H8G2 361 aa3.9□□□□□ -1.79
LINC00648-202ENST00000555985 ETNK1Q9HBU6 452 aa3.9□□□□□ -1.79
LINC00648-202ENST00000555985 SAE1Q9UBE0 346 aaPredicted RBP3.9□□□□□ -1.79
LINC00648-202ENST00000555985 STOML1Q9UBI4 398 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms