RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 IGSF8Q969P0 613 aa6.96□□□□□ -1.29
TDP1-213ENST00000555880 GFM2Q969S9 779 aaKnown RBP6.96□□□□□ -1.29
TDP1-213ENST00000555880 KIAA1191Q96A73 305 aa6.96□□□□□ -1.29
TDP1-213ENST00000555880 LRRC58Q96CX6 371 aa6.96□□□□□ -1.29
TDP1-213ENST00000555880 SLC45A3Q96JT2 553 aa6.96□□□□□ -1.29
TDP1-213ENST00000555880 FAM193BQ96PV7 902 aaPredicted RBP6.96□□□□□ -1.29
TDP1-213ENST00000555880 GPATCH1Q9BRR8 931 aaKnown RBP6.96□□□□□ -1.29
TDP1-213ENST00000555880 NUSAP1Q9BXS6 441 aaKnown RBP6.96□□□□□ -1.29
TDP1-213ENST00000555880 DERL2Q9GZP9 239 aa6.96□□□□□ -1.29
TDP1-213ENST00000555880 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.96□□□□□ -1.29
TDP1-213ENST00000555880 SDR39U1Q9NRG7 319 aaPredicted RBP6.96□□□□□ -1.29
TDP1-213ENST00000555880 DDX18Q9NVP1 670 aaKnown RBP6.96□□□□□ -1.29
TDP1-213ENST00000555880 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.96□□□□□ -1.29
TDP1-213ENST00000555880 RNF11Q9Y3C5 154 aa6.96□□□□□ -1.29
TDP1-213ENST00000555880 A0A087WXM4 84 aa6.96□□□□□ -1.3
TDP1-213ENST00000555880 RNF103-CHMP3A0A140T963 221 aa6.96□□□□□ -1.3
TDP1-213ENST00000555880 LCHNA4D1U4 455 aa6.96□□□□□ -1.3
TDP1-213ENST00000555880 SAC3D1A6NKF1 404 aa6.96□□□□□ -1.3
TDP1-213ENST00000555880 C2orf81A6NN90 581 aa6.96□□□□□ -1.3
TDP1-213ENST00000555880 FAM155AB1AL88 458 aaPredicted RBP6.96□□□□□ -1.3
TDP1-213ENST00000555880 F5H5T6 163 aa6.96□□□□□ -1.3
TDP1-213ENST00000555880 TMEM189-UBE2V1I3L0A0 370 aa6.96□□□□□ -1.3
TDP1-213ENST00000555880 SYN3O14994 580 aa6.96□□□□□ -1.3
TDP1-213ENST00000555880 SNX2O60749 519 aa6.96□□□□□ -1.3
TDP1-213ENST00000555880 VPS26AO75436 327 aa6.96□□□□□ -1.3
TDP1-213ENST00000555880 TRMUO75648 421 aaKnown RBP6.96□□□□□ -1.3
TDP1-213ENST00000555880 MLYCDO95822 493 aa6.96□□□□□ -1.3
TDP1-213ENST00000555880 EOMESO95936 686 aa6.96□□□□□ -1.3
TDP1-213ENST00000555880 CYBBP04839 570 aa6.96□□□□□ -1.3
TDP1-213ENST00000555880 PIRTP0C851 137 aa6.96□□□□□ -1.3
TDP1-213ENST00000555880 CDH2P19022 906 aaPredicted RBP6.96□□□□□ -1.3
TDP1-213ENST00000555880 CAPN3P20807 821 aa6.96□□□□□ -1.3
TDP1-213ENST00000555880 GPR15P49685 360 aa6.96□□□□□ -1.3
TDP1-213ENST00000555880 PRKCQQ04759 706 aa6.96□□□□□ -1.3
TDP1-213ENST00000555880 GRIK2Q13002 908 aa6.96□□□□□ -1.3
TDP1-213ENST00000555880 NFYCQ13952 458 aa6.96□□□□□ -1.3
TDP1-213ENST00000555880 CAPRIN1Q14444 709 aaKnown RBP6.96□□□□□ -1.3
TDP1-213ENST00000555880 GRB7Q14451 532 aa6.96□□□□□ -1.3
TDP1-213ENST00000555880 RBBP7Q16576 425 aa6.96□□□□□ -1.3
TDP1-213ENST00000555880 KCTD21Q4G0X4 260 aa6.96□□□□□ -1.3
TDP1-213ENST00000555880 CTXN3Q4LDR2 81 aa6.96□□□□□ -1.3
TDP1-213ENST00000555880 HMBOX1Q6NT76 420 aa6.96□□□□□ -1.3
TDP1-213ENST00000555880 TTC33Q6PID6 262 aaPredicted RBP6.96□□□□□ -1.3
TDP1-213ENST00000555880 TXNDC11Q6PKC3 985 aa6.96□□□□□ -1.3
TDP1-213ENST00000555880 LPCAT2Q7L5N7 544 aa6.96□□□□□ -1.3
TDP1-213ENST00000555880 GLT6D1Q7Z4J2 308 aa6.96□□□□□ -1.3
TDP1-213ENST00000555880 CIR1Q86X95 450 aaPredicted RBP6.96□□□□□ -1.3
TDP1-213ENST00000555880 SPPL2CQ8IUH8 684 aa6.96□□□□□ -1.3
TDP1-213ENST00000555880 SLC15A3Q8IY34 581 aa6.96□□□□□ -1.3
TDP1-213ENST00000555880 CBR4Q8N4T8 237 aa6.96□□□□□ -1.3
TDP1-213ENST00000555880 MFSD2AQ8NA29 543 aa6.96□□□□□ -1.3
TDP1-213ENST00000555880 FAM47BQ8NA70 645 aa6.96□□□□□ -1.3
TDP1-213ENST00000555880 TRPV1Q8NER1 839 aa6.96□□□□□ -1.3
TDP1-213ENST00000555880 OR13C4Q8NGS5 318 aa6.96□□□□□ -1.3
TDP1-213ENST00000555880 B4GALNT2Q8NHY0 566 aa6.96□□□□□ -1.3
TDP1-213ENST00000555880 RMDN1Q96DB5 314 aa6.96□□□□□ -1.3
TDP1-213ENST00000555880 CENPNQ96H22 339 aaPredicted RBP6.96□□□□□ -1.3
TDP1-213ENST00000555880 HHIPL1Q96JK4 782 aa6.96□□□□□ -1.3
TDP1-213ENST00000555880 ATOH8Q96SQ7 321 aa6.96□□□□□ -1.3
TDP1-213ENST00000555880 SLC29A1Q99808 456 aa6.96□□□□□ -1.3
TDP1-213ENST00000555880 KCTD14Q9BQ13 255 aaPredicted RBP6.96□□□□□ -1.3
TDP1-213ENST00000555880 CINPQ9BW66 212 aaPredicted RBP6.96□□□□□ -1.3
TDP1-213ENST00000555880 SEMA4BQ9NPR2 832 aaPredicted RBP6.96□□□□□ -1.3
TDP1-213ENST00000555880 AGPAT4Q9NRZ5 378 aa6.96□□□□□ -1.3
TDP1-213ENST00000555880 RIC8BQ9NVN3 520 aa6.96□□□□□ -1.3
TDP1-213ENST00000555880 NLE1Q9NVX2 485 aaPredicted RBP6.96□□□□□ -1.3
TDP1-213ENST00000555880 TUBA8Q9NY65 449 aaPredicted RBP6.96□□□□□ -1.3
TDP1-213ENST00000555880 SEPT3Q9UH03 358 aa6.96□□□□□ -1.3
TDP1-213ENST00000555880 POLG2Q9UHN1 485 aa6.96□□□□□ -1.3
TDP1-213ENST00000555880 PTBP2Q9UKA9 531 aaKnown RBP6.96□□□□□ -1.3
TDP1-213ENST00000555880 FAM50BQ9Y247 325 aa6.96□□□□□ -1.3
TDP1-213ENST00000555880 BTRCQ9Y297 605 aa6.96□□□□□ -1.3
TDP1-213ENST00000555880 PRG3Q9Y2Y8 225 aaPredicted RBP6.96□□□□□ -1.3
TDP1-213ENST00000555880 PTGDR2Q9Y5Y4 395 aa6.96□□□□□ -1.3
TDP1-213ENST00000555880 A0A1B0GVG6 124 aa6.95□□□□□ -1.3
TDP1-213ENST00000555880 A0A1W2PP18 115 aa6.95□□□□□ -1.3
TDP1-213ENST00000555880 CCDC154A6NI56 674 aa6.95□□□□□ -1.3
TDP1-213ENST00000555880 OR6C75A6NL08 312 aa6.95□□□□□ -1.3
TDP1-213ENST00000555880 H3BMM5 538 aa6.95□□□□□ -1.3
TDP1-213ENST00000555880 BTN3A1O00481 513 aa6.95□□□□□ -1.3
TDP1-213ENST00000555880 SOCS2O14508 198 aa6.95□□□□□ -1.3
TDP1-213ENST00000555880 STX16O14662 325 aa6.95□□□□□ -1.3
TDP1-213ENST00000555880 ARPC2O15144 300 aa6.95□□□□□ -1.3
TDP1-213ENST00000555880 INPP4BO15327 924 aa6.95□□□□□ -1.3
TDP1-213ENST00000555880 ECI2O75521 394 aa6.95□□□□□ -1.3
TDP1-213ENST00000555880 BAIAP3O94812 1187 aa6.95□□□□□ -1.3
TDP1-213ENST00000555880 BMP10O95393 424 aa6.95□□□□□ -1.3
TDP1-213ENST00000555880 TBX18O95935 607 aa6.95□□□□□ -1.3
TDP1-213ENST00000555880 IGHA2P01877 340 aa6.95□□□□□ -1.3
TDP1-213ENST00000555880 ASGR1P07306 291 aa6.95□□□□□ -1.3
TDP1-213ENST00000555880 UROSP10746 265 aa6.95□□□□□ -1.3
TDP1-213ENST00000555880 CYBAP13498 195 aa6.95□□□□□ -1.3
TDP1-213ENST00000555880 MTHFD2P13995 350 aa6.95□□□□□ -1.3
TDP1-213ENST00000555880 CD46P15529 392 aa6.95□□□□□ -1.3
TDP1-213ENST00000555880 CKMT2P17540 419 aa6.95□□□□□ -1.3
TDP1-213ENST00000555880 TACR2P21452 398 aa6.95□□□□□ -1.3
TDP1-213ENST00000555880 SLC6A2P23975 617 aa6.95□□□□□ -1.3
TDP1-213ENST00000555880 HOXD10P28358 340 aa6.95□□□□□ -1.3
TDP1-213ENST00000555880 FMO4P31512 558 aa6.95□□□□□ -1.3
TDP1-213ENST00000555880 ACVRL1P37023 503 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms