RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 NAT6Q93015 286 aa13.54□□□□□ -0.24
SNX6-203ENST00000555416 GLYATL1Q969I3 302 aa13.54□□□□□ -0.24
SNX6-203ENST00000555416 RTP4Q96DX8 246 aa13.54□□□□□ -0.24
SNX6-203ENST00000555416 ZSCAN5AQ9BUG6 496 aa13.54□□□□□ -0.24
SNX6-203ENST00000555416 GSDMCQ9BYG8 508 aa13.54□□□□□ -0.24
SNX6-203ENST00000555416 ABCG4Q9H172 646 aa13.54□□□□□ -0.24
SNX6-203ENST00000555416 OR2AG1Q9H205 316 aa13.54□□□□□ -0.24
SNX6-203ENST00000555416 TRABDQ9H4I3 376 aa13.54□□□□□ -0.24
SNX6-203ENST00000555416 UGT1A7Q9HAW7 530 aa13.54□□□□□ -0.24
SNX6-203ENST00000555416 UGT1A10Q9HAW8 530 aa13.54□□□□□ -0.24
SNX6-203ENST00000555416 UGT1A8Q9HAW9 530 aa13.54□□□□□ -0.24
SNX6-203ENST00000555416 PIH1D1Q9NWS0 290 aaKnown RBP13.54□□□□□ -0.24
SNX6-203ENST00000555416 VPS18Q9P253 973 aa13.54□□□□□ -0.24
SNX6-203ENST00000555416 SLC23A2Q9UGH3 650 aa13.54□□□□□ -0.24
SNX6-203ENST00000555416 NTN3O00634 580 aaPredicted RBP13.53□□□□□ -0.24
SNX6-203ENST00000555416 NUAK1O60285 661 aa13.53□□□□□ -0.24
SNX6-203ENST00000555416 CSO75390 466 aaKnown RBP13.53□□□□□ -0.24
SNX6-203ENST00000555416 SLC25A14O95258 325 aaPredicted RBP13.53□□□□□ -0.24
SNX6-203ENST00000555416 ECEL1O95672 775 aa13.53□□□□□ -0.24
SNX6-203ENST00000555416 CXCR5P32302 372 aa13.53□□□□□ -0.24
SNX6-203ENST00000555416 ACTR1BP42025 376 aa13.53□□□□□ -0.24
SNX6-203ENST00000555416 ACTR1AP61163 376 aa13.53□□□□□ -0.24
SNX6-203ENST00000555416 CCL7P80098 99 aa13.53□□□□□ -0.24
SNX6-203ENST00000555416 PARP6Q2NL67 630 aa13.53□□□□□ -0.24
SNX6-203ENST00000555416 CERCAMQ5T4B2 595 aa13.53□□□□□ -0.24
SNX6-203ENST00000555416 FAM151BQ6UXP7 276 aa13.53□□□□□ -0.24
SNX6-203ENST00000555416 ARHGEF18Q6ZSZ5 1173 aa13.53□□□□□ -0.24
SNX6-203ENST00000555416 CHST15Q7LFX5 561 aaPredicted RBP13.53□□□□□ -0.24
SNX6-203ENST00000555416 TMPRSS9Q7Z410 1059 aa13.53□□□□□ -0.24
SNX6-203ENST00000555416 CACTIN-AS1Q8N1I8 211 aa13.53□□□□□ -0.24
SNX6-203ENST00000555416 PDCD7Q8N8D1 485 aaKnown RBP13.53□□□□□ -0.24
SNX6-203ENST00000555416 ZDHHC1Q8WTX9 485 aa13.53□□□□□ -0.24
SNX6-203ENST00000555416 NAT14Q8WUY8 206 aa13.53□□□□□ -0.24
SNX6-203ENST00000555416 PLEKHG4BQ96PX9 1271 aa13.53□□□□□ -0.24
SNX6-203ENST00000555416 ALS2CR12Q96Q35 445 aa13.53□□□□□ -0.24
SNX6-203ENST00000555416 SRPK1Q96SB4 655 aaKnown RBP13.53□□□□□ -0.24
SNX6-203ENST00000555416 TBL1YQ9BQ87 522 aa13.53□□□□□ -0.24
SNX6-203ENST00000555416 FERMT1Q9BQL6 677 aa13.53□□□□□ -0.24
SNX6-203ENST00000555416 CDH19Q9H159 772 aa13.53□□□□□ -0.24
SNX6-203ENST00000555416 CARD9Q9H257 536 aa13.53□□□□□ -0.24
SNX6-203ENST00000555416 TRIM39Q9HCM9 518 aa13.53□□□□□ -0.24
SNX6-203ENST00000555416 EVA1BQ9NVM1 165 aa13.53□□□□□ -0.24
SNX6-203ENST00000555416 HACD3Q9P035 362 aa13.53□□□□□ -0.24
SNX6-203ENST00000555416 KCNK6Q9Y257 313 aa13.53□□□□□ -0.24
SNX6-203ENST00000555416 AAR2Q9Y312 384 aaKnown RBP13.53□□□□□ -0.24
SNX6-203ENST00000555416 ZFC3H1O60293 1989 aaKnown RBP13.52□□□□□ -0.24
SNX6-203ENST00000555416 CACNA1BQ00975 2339 aa13.52□□□□□ -0.24
SNX6-203ENST00000555416 TRBV23OR9-2A0A075B6M9 112 aa13.52□□□□□ -0.25
SNX6-203ENST00000555416 TMEM8BA6NDV4 472 aa13.52□□□□□ -0.25
SNX6-203ENST00000555416 SRRM3A6NNA2 597 aaPredicted RBP13.52□□□□□ -0.25
SNX6-203ENST00000555416 CCL22O00626 93 aa13.52□□□□□ -0.25
SNX6-203ENST00000555416 KRT37O76014 449 aa13.52□□□□□ -0.25
SNX6-203ENST00000555416 ACP5P13686 325 aa13.52□□□□□ -0.25
SNX6-203ENST00000555416 TPH1P17752 444 aa13.52□□□□□ -0.25
SNX6-203ENST00000555416 PRPSAP1Q14558 356 aa13.52□□□□□ -0.25
SNX6-203ENST00000555416 ISXQ2M1V0 245 aa13.52□□□□□ -0.25
SNX6-203ENST00000555416 CRTC3Q6UUV7 619 aa13.52□□□□□ -0.25
SNX6-203ENST00000555416 B3GNT8Q7Z7M8 397 aa13.52□□□□□ -0.25
SNX6-203ENST00000555416 PROSER1Q86XN7 944 aa13.52□□□□□ -0.25
SNX6-203ENST00000555416 ZNF547Q8IVP9 402 aa13.52□□□□□ -0.25
SNX6-203ENST00000555416 ARL14Q8N4G2 192 aa13.52□□□□□ -0.25
SNX6-203ENST00000555416 TRIM58Q8NG06 486 aa13.52□□□□□ -0.25
SNX6-203ENST00000555416 OR13C4Q8NGS5 318 aa13.52□□□□□ -0.25
SNX6-203ENST00000555416 CCDC97Q96F63 343 aaPredicted RBP13.52□□□□□ -0.25
SNX6-203ENST00000555416 CCDC86Q9H6F5 360 aaKnown RBP13.52□□□□□ -0.25
SNX6-203ENST00000555416 SYNDIG1Q9H7V2 258 aa13.52□□□□□ -0.25
SNX6-203ENST00000555416 ARNT2Q9HBZ2 717 aa13.52□□□□□ -0.25
SNX6-203ENST00000555416 RAD18Q9NS91 495 aa13.52□□□□□ -0.25
SNX6-203ENST00000555416 LRIT1Q9P2V4 623 aa13.52□□□□□ -0.25
SNX6-203ENST00000555416 TBC1D29Q9UFV1 150 aa13.52□□□□□ -0.25
SNX6-203ENST00000555416 ATXN7L1Q9ULK2 861 aaPredicted RBP13.52□□□□□ -0.25
SNX6-203ENST00000555416 ENTPD2Q9Y5L3 495 aa13.52□□□□□ -0.25
SNX6-203ENST00000555416 KIF26BQ2KJY2 2108 aa13.52□□□□□ -0.25
SNX6-203ENST00000555416 A6NCN8 305 aa13.51□□□□□ -0.25
SNX6-203ENST00000555416 CHUKO15111 745 aa13.51□□□□□ -0.25
SNX6-203ENST00000555416 PPM1DO15297 605 aa13.51□□□□□ -0.25
SNX6-203ENST00000555416 GRID2O43424 1007 aa13.51□□□□□ -0.25
SNX6-203ENST00000555416 B4GAT1O43505 415 aa13.51□□□□□ -0.25
SNX6-203ENST00000555416 RPLP0P05388 317 aaKnown RBP13.51□□□□□ -0.25
SNX6-203ENST00000555416 ZSCAN5DPP0CG00 497 aa13.51□□□□□ -0.25
SNX6-203ENST00000555416 GLB1P16278 677 aa13.51□□□□□ -0.25
SNX6-203ENST00000555416 SPAM1P38567 509 aa13.51□□□□□ -0.25
SNX6-203ENST00000555416 TNNT3P45378 269 aaPredicted RBP13.51□□□□□ -0.25
SNX6-203ENST00000555416 ZNF140P52738 457 aaPredicted RBP13.51□□□□□ -0.25
SNX6-203ENST00000555416 XIAPP98170 497 aa13.51□□□□□ -0.25
SNX6-203ENST00000555416 B4GALNT1Q00973 533 aa13.51□□□□□ -0.25
SNX6-203ENST00000555416 RTP5Q14D33 572 aa13.51□□□□□ -0.25
SNX6-203ENST00000555416 TAF1AQ15573 450 aaPredicted RBP13.51□□□□□ -0.25
SNX6-203ENST00000555416 PLA2G4EQ3MJ16 856 aa13.51□□□□□ -0.25
SNX6-203ENST00000555416 PDPK2PQ6A1A2 396 aa13.51□□□□□ -0.25
SNX6-203ENST00000555416 RBM44Q6ZP01 1051 aaKnown RBP13.51□□□□□ -0.25
SNX6-203ENST00000555416 ZNF438Q7Z4V0 828 aa13.51□□□□□ -0.25
SNX6-203ENST00000555416 SPRED1Q7Z699 444 aa13.51□□□□□ -0.25
SNX6-203ENST00000555416 PHYKPLQ8IUZ5 450 aa13.51□□□□□ -0.25
SNX6-203ENST00000555416 CCNJLQ8IV13 435 aa13.51□□□□□ -0.25
SNX6-203ENST00000555416 OR4K2Q8NGD2 314 aa13.51□□□□□ -0.25
SNX6-203ENST00000555416 ATXN7L3BQ96GX2 97 aa13.51□□□□□ -0.25
SNX6-203ENST00000555416 VPS35Q96QK1 796 aa13.51□□□□□ -0.25
SNX6-203ENST00000555416 FKBPLQ9UIM3 349 aa13.51□□□□□ -0.25
SNX6-203ENST00000555416 APPL1Q9UKG1 709 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms