RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 TMPRSS3P57727 454 aa11.72□□□□□ -0.53
VRK1-204ENST00000555351 CCDC173Q0VFZ6 552 aa11.72□□□□□ -0.53
VRK1-204ENST00000555351 BIRC2Q13490 618 aa11.72□□□□□ -0.53
VRK1-204ENST00000555351 KIR2DS5Q14953 304 aa11.72□□□□□ -0.53
VRK1-204ENST00000555351 PCSK7Q16549 785 aa11.72□□□□□ -0.53
VRK1-204ENST00000555351 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.72□□□□□ -0.53
VRK1-204ENST00000555351 ITPRIPL1Q6GPH6 555 aa11.72□□□□□ -0.53
VRK1-204ENST00000555351 RAD9BQ6WBX8 426 aa11.72□□□□□ -0.53
VRK1-204ENST00000555351 PID1Q7Z2X4 250 aa11.72□□□□□ -0.53
VRK1-204ENST00000555351 TRIM74Q86UV6 250 aa11.72□□□□□ -0.53
VRK1-204ENST00000555351 ZC3H18Q86VM9 953 aaKnown RBP11.72□□□□□ -0.53
VRK1-204ENST00000555351 PHYKPLQ8IUZ5 450 aa11.72□□□□□ -0.53
VRK1-204ENST00000555351 ZNF567Q8N184 647 aa11.72□□□□□ -0.53
VRK1-204ENST00000555351 Q8N9G6 341 aaPredicted RBP11.72□□□□□ -0.53
VRK1-204ENST00000555351 LRRC57Q8N9N7 239 aa11.72□□□□□ -0.53
VRK1-204ENST00000555351 GPR26Q8NDV2 337 aa11.72□□□□□ -0.53
VRK1-204ENST00000555351 KRT35Q92764 455 aa11.72□□□□□ -0.53
VRK1-204ENST00000555351 GLYATL1Q969I3 302 aa11.72□□□□□ -0.53
VRK1-204ENST00000555351 HAUS1Q96CS2 278 aa11.72□□□□□ -0.53
VRK1-204ENST00000555351 UBL7Q96S82 380 aaPredicted RBP11.72□□□□□ -0.53
VRK1-204ENST00000555351 BAG1Q99933 345 aaPredicted RBP11.72□□□□□ -0.53
VRK1-204ENST00000555351 SPATA16Q9BXB7 569 aa11.72□□□□□ -0.53
VRK1-204ENST00000555351 EPB41L1Q9H4G0 881 aa11.72□□□□□ -0.53
VRK1-204ENST00000555351 STN1Q9H668 368 aaKnown RBP11.72□□□□□ -0.53
VRK1-204ENST00000555351 EPB41L5Q9HCM4 733 aa11.72□□□□□ -0.53
VRK1-204ENST00000555351 AKAP7Q9P0M2 348 aaPredicted RBP11.72□□□□□ -0.53
VRK1-204ENST00000555351 KLHL8Q9P2G9 620 aaPredicted RBP11.72□□□□□ -0.53
VRK1-204ENST00000555351 REXO2Q9Y3B8 237 aaKnown RBP11.72□□□□□ -0.53
VRK1-204ENST00000555351 OAS3Q9Y6K5 1087 aaKnown RBP11.72□□□□□ -0.53
VRK1-204ENST00000555351 LAMA5O15230 3695 aa11.72□□□□□ -0.53
VRK1-204ENST00000555351 ZFC3H1O60293 1989 aaKnown RBP11.71□□□□□ -0.53
VRK1-204ENST00000555351 SCN8AQ9UQD0 1980 aa11.71□□□□□ -0.53
VRK1-204ENST00000555351 IGHV1OR21-1A0A087WYE8 117 aa11.71□□□□□ -0.53
VRK1-204ENST00000555351 A6NCN8 305 aa11.71□□□□□ -0.53
VRK1-204ENST00000555351 MIF4GDA9UHW6 222 aaKnown RBP11.71□□□□□ -0.53
VRK1-204ENST00000555351 CASC3O15234 703 aaKnown RBP11.71□□□□□ -0.53
VRK1-204ENST00000555351 PPM1DO15297 605 aa11.71□□□□□ -0.53
VRK1-204ENST00000555351 GRID2O43424 1007 aa11.71□□□□□ -0.53
VRK1-204ENST00000555351 KCNJ13O60928 360 aa11.71□□□□□ -0.53
VRK1-204ENST00000555351 TJP3O95049 919 aa11.71□□□□□ -0.53
VRK1-204ENST00000555351 JMJD7P0C870 316 aa11.71□□□□□ -0.53
VRK1-204ENST00000555351 F3P13726 295 aa11.71□□□□□ -0.53
VRK1-204ENST00000555351 BPIP17213 487 aa11.71□□□□□ -0.53
VRK1-204ENST00000555351 CD82P27701 267 aa11.71□□□□□ -0.53
VRK1-204ENST00000555351 CD1CP29017 333 aa11.71□□□□□ -0.53
VRK1-204ENST00000555351 GEMP55040 296 aa11.71□□□□□ -0.53
VRK1-204ENST00000555351 SLC1A5Q15758 541 aa11.71□□□□□ -0.53
VRK1-204ENST00000555351 MAP9Q49MG5 647 aa11.71□□□□□ -0.53
VRK1-204ENST00000555351 SIRPB2Q5JXA9 342 aa11.71□□□□□ -0.53
VRK1-204ENST00000555351 IYDQ6PHW0 289 aa11.71□□□□□ -0.53
VRK1-204ENST00000555351 MARK2Q7KZI7 788 aaKnown RBP11.71□□□□□ -0.53
VRK1-204ENST00000555351 CHST15Q7LFX5 561 aaPredicted RBP11.71□□□□□ -0.53
VRK1-204ENST00000555351 GPR155Q7Z3F1 870 aa11.71□□□□□ -0.53
VRK1-204ENST00000555351 KDELC2Q7Z4H8 507 aa11.71□□□□□ -0.53
VRK1-204ENST00000555351 CDKL3Q8IVW4 592 aaPredicted RBP11.71□□□□□ -0.53
VRK1-204ENST00000555351 SFTPA2Q8IWL1 248 aa11.71□□□□□ -0.53
VRK1-204ENST00000555351 SYCE1Q8N0S2 351 aa11.71□□□□□ -0.53
VRK1-204ENST00000555351 OR4D9Q8NGE8 314 aa11.71□□□□□ -0.53
VRK1-204ENST00000555351 BRSK1Q8TDC3 778 aa11.71□□□□□ -0.53
VRK1-204ENST00000555351 MRGPRX2Q96LB1 330 aa11.71□□□□□ -0.53
VRK1-204ENST00000555351 TIMM29Q9BSF4 260 aa11.71□□□□□ -0.53
VRK1-204ENST00000555351 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.71□□□□□ -0.53
VRK1-204ENST00000555351 OSBPL8Q9BZF1 889 aa11.71□□□□□ -0.53
VRK1-204ENST00000555351 FOXP3Q9BZS1 431 aa11.71□□□□□ -0.53
VRK1-204ENST00000555351 GBA3Q9H227 469 aa11.71□□□□□ -0.53
VRK1-204ENST00000555351 SUDS3Q9H7L9 328 aaPredicted RBP11.71□□□□□ -0.53
VRK1-204ENST00000555351 UCK1Q9HA47 277 aa11.71□□□□□ -0.53
VRK1-204ENST00000555351 PDP2Q9P2J9 529 aa11.71□□□□□ -0.53
VRK1-204ENST00000555351 ATXN10Q9UBB4 475 aa11.71□□□□□ -0.53
VRK1-204ENST00000555351 RALYQ9UKM9 306 aaKnown RBP11.71□□□□□ -0.53
VRK1-204ENST00000555351 TFR2Q9UP52 801 aa11.71□□□□□ -0.53
VRK1-204ENST00000555351 SHOC2Q9UQ13 582 aa11.71□□□□□ -0.53
VRK1-204ENST00000555351 AAR2Q9Y312 384 aaKnown RBP11.71□□□□□ -0.53
VRK1-204ENST00000555351 IGSF10Q6WRI0 2623 aa11.7□□□□□ -0.54
VRK1-204ENST00000555351 H7C0C1 242 aa11.7□□□□□ -0.54
VRK1-204ENST00000555351 KMOO15229 486 aa11.7□□□□□ -0.54
VRK1-204ENST00000555351 STK10O94804 968 aaKnown RBP11.7□□□□□ -0.54
VRK1-204ENST00000555351 PIRTP0C851 137 aa11.7□□□□□ -0.54
VRK1-204ENST00000555351 ALDH4A1P30038 563 aa11.7□□□□□ -0.54
VRK1-204ENST00000555351 ATP5OP48047 213 aa11.7□□□□□ -0.54
VRK1-204ENST00000555351 LIMK2P53671 638 aa11.7□□□□□ -0.54
VRK1-204ENST00000555351 EPHA4P54764 986 aa11.7□□□□□ -0.54
VRK1-204ENST00000555351 NAP1L1P55209 391 aaKnown RBP11.7□□□□□ -0.54
VRK1-204ENST00000555351 OR1D5P58170 312 aa11.7□□□□□ -0.54
VRK1-204ENST00000555351 KIF5AQ12840 1032 aa11.7□□□□□ -0.54
VRK1-204ENST00000555351 CCDC181Q5TID7 509 aa11.7□□□□□ -0.54
VRK1-204ENST00000555351 WDR74Q6RFH5 385 aaPredicted RBP11.7□□□□□ -0.54
VRK1-204ENST00000555351 WASH2PQ6VEQ5 465 aa11.7□□□□□ -0.54
VRK1-204ENST00000555351 ADGRG6Q86SQ4 1221 aa11.7□□□□□ -0.54
VRK1-204ENST00000555351 KIAA1328Q86T90 577 aa11.7□□□□□ -0.54
VRK1-204ENST00000555351 SLC9B2Q86UD5 537 aa11.7□□□□□ -0.54
VRK1-204ENST00000555351 GAS2L3Q86XJ1 694 aa11.7□□□□□ -0.54
VRK1-204ENST00000555351 TMEM139Q8IV31 216 aa11.7□□□□□ -0.54
VRK1-204ENST00000555351 TTC30BQ8N4P2 665 aa11.7□□□□□ -0.54
VRK1-204ENST00000555351 TTC13Q8NBP0 860 aa11.7□□□□□ -0.54
VRK1-204ENST00000555351 ACTL9Q8TC94 416 aa11.7□□□□□ -0.54
VRK1-204ENST00000555351 SLC37A2Q8TED4 501 aa11.7□□□□□ -0.54
VRK1-204ENST00000555351 PATE1Q8WXA2 126 aa11.7□□□□□ -0.54
VRK1-204ENST00000555351 WBP1Q96G27 269 aa11.7□□□□□ -0.54
VRK1-204ENST00000555351 OXNAD1Q96HP4 312 aaPredicted RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms