RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 C1orf210Q8IVY1 113 aa10.69□□□□□ -0.7
TDP1-211ENST00000555178 DCLK2Q8N568 766 aa10.69□□□□□ -0.7
TDP1-211ENST00000555178 TP53I13Q8NBR0 393 aaPredicted RBP10.69□□□□□ -0.7
TDP1-211ENST00000555178 RAB7BQ96AH8 199 aa10.69□□□□□ -0.7
TDP1-211ENST00000555178 BIRC7Q96CA5 298 aa10.69□□□□□ -0.7
TDP1-211ENST00000555178 LGR4Q9BXB1 951 aa10.69□□□□□ -0.7
TDP1-211ENST00000555178 C1QTNF2Q9BXJ5 285 aa10.69□□□□□ -0.7
TDP1-211ENST00000555178 BTBD1Q9H0C5 482 aa10.69□□□□□ -0.7
TDP1-211ENST00000555178 C12orf65Q9H3J6 166 aaKnown RBP10.69□□□□□ -0.7
TDP1-211ENST00000555178 ASB8Q9H765 288 aa10.69□□□□□ -0.7
TDP1-211ENST00000555178 NCKAP1Q9Y2A7 1128 aa10.69□□□□□ -0.7
TDP1-211ENST00000555178 FANCMQ8IYD8 2048 aa10.69□□□□□ -0.7
TDP1-211ENST00000555178 LRP4O75096 1905 aa10.68□□□□□ -0.7
TDP1-211ENST00000555178 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.68□□□□□ -0.7
TDP1-211ENST00000555178 POM121BA6NF01 834 aa10.68□□□□□ -0.7
TDP1-211ENST00000555178 TNFRSF10AO00220 468 aa10.68□□□□□ -0.7
TDP1-211ENST00000555178 TPP1O14773 563 aa10.68□□□□□ -0.7
TDP1-211ENST00000555178 AXIN1O15169 862 aa10.68□□□□□ -0.7
TDP1-211ENST00000555178 INPP4BO15327 924 aa10.68□□□□□ -0.7
TDP1-211ENST00000555178 TSPAN6O43657 245 aa10.68□□□□□ -0.7
TDP1-211ENST00000555178 SPAG7O75391 227 aa10.68□□□□□ -0.7
TDP1-211ENST00000555178 RFPL1O75677 317 aa10.68□□□□□ -0.7
TDP1-211ENST00000555178 CCR3P51677 355 aa10.68□□□□□ -0.7
TDP1-211ENST00000555178 CREB5Q02930 508 aa10.68□□□□□ -0.7
TDP1-211ENST00000555178 NAB1Q13506 487 aa10.68□□□□□ -0.7
TDP1-211ENST00000555178 TYSND1Q2T9J0 566 aa10.68□□□□□ -0.7
TDP1-211ENST00000555178 PPM1JQ5JR12 505 aa10.68□□□□□ -0.7
TDP1-211ENST00000555178 AGBL2Q5U5Z8 902 aa10.68□□□□□ -0.7
TDP1-211ENST00000555178 ZNF549Q6P9A3 640 aa10.68□□□□□ -0.7
TDP1-211ENST00000555178 LAYNQ6UX15 382 aa10.68□□□□□ -0.7
TDP1-211ENST00000555178 HORMAD1Q86X24 394 aa10.68□□□□□ -0.7
TDP1-211ENST00000555178 SLC41A1Q8IVJ1 513 aa10.68□□□□□ -0.7
TDP1-211ENST00000555178 TMEFF1Q8IYR6 380 aa10.68□□□□□ -0.7
TDP1-211ENST00000555178 RIBC1Q8N443 379 aaPredicted RBP10.68□□□□□ -0.7
TDP1-211ENST00000555178 GPATCH11Q8N954 259 aa10.68□□□□□ -0.7
TDP1-211ENST00000555178 GPR150Q8NGU9 434 aa10.68□□□□□ -0.7
TDP1-211ENST00000555178 LENG8Q96PV6 779 aaPredicted RBP10.68□□□□□ -0.7
TDP1-211ENST00000555178 SRPK1Q96SB4 655 aaKnown RBP10.68□□□□□ -0.7
TDP1-211ENST00000555178 SLC17A9Q9BYT1 436 aa10.68□□□□□ -0.7
TDP1-211ENST00000555178 FAM83DQ9H4H8 585 aa10.68□□□□□ -0.7
TDP1-211ENST00000555178 PKD2L2Q9NZM6 624 aa10.68□□□□□ -0.7
TDP1-211ENST00000555178 SCML1Q9UN30 329 aa10.68□□□□□ -0.7
TDP1-211ENST00000555178 OAS3Q9Y6K5 1087 aaKnown RBP10.68□□□□□ -0.7
TDP1-211ENST00000555178 SLC30A1Q9Y6M5 507 aa10.68□□□□□ -0.7
TDP1-211ENST00000555178 ZFC3H1O60293 1989 aaKnown RBP10.68□□□□□ -0.7
TDP1-211ENST00000555178 IQANK1A0A1B0GTG1 560 aa10.68□□□□□ -0.7
TDP1-211ENST00000555178 UBA6A0AVT1 1052 aaPredicted RBP10.68□□□□□ -0.7
TDP1-211ENST00000555178 H0Y858 1186 aa10.68□□□□□ -0.7
TDP1-211ENST00000555178 TM7SF2O76062 418 aa10.68□□□□□ -0.7
TDP1-211ENST00000555178 FSBPO95073 299 aa10.68□□□□□ -0.7
TDP1-211ENST00000555178 PCCBP05166 539 aa10.68□□□□□ -0.7
TDP1-211ENST00000555178 SNRPAP09012 282 aaKnown RBP10.68□□□□□ -0.7
TDP1-211ENST00000555178 KRT4P19013 534 aa10.68□□□□□ -0.7
TDP1-211ENST00000555178 PMLP29590 882 aa10.68□□□□□ -0.7
TDP1-211ENST00000555178 CD6P30203 668 aa10.68□□□□□ -0.7
TDP1-211ENST00000555178 IGFALSP35858 605 aa10.68□□□□□ -0.7
TDP1-211ENST00000555178 LEPRP48357 1165 aaKnown RBP10.68□□□□□ -0.7
TDP1-211ENST00000555178 CD151P48509 253 aa10.68□□□□□ -0.7
TDP1-211ENST00000555178 B4GALNT1Q00973 533 aa10.68□□□□□ -0.7
TDP1-211ENST00000555178 CACNG1Q06432 222 aa10.68□□□□□ -0.7
TDP1-211ENST00000555178 GPS2Q13227 327 aa10.68□□□□□ -0.7
TDP1-211ENST00000555178 RASA2Q15283 850 aa10.68□□□□□ -0.7
TDP1-211ENST00000555178 IRF4Q15306 451 aa10.68□□□□□ -0.7
TDP1-211ENST00000555178 DBN1Q16643 649 aa10.68□□□□□ -0.7
TDP1-211ENST00000555178 GRTP1Q5TC63 336 aa10.68□□□□□ -0.7
TDP1-211ENST00000555178 MRNIPQ6NTE8 343 aa10.68□□□□□ -0.7
TDP1-211ENST00000555178 MAMSTRQ6ZN01 415 aa10.68□□□□□ -0.7
TDP1-211ENST00000555178 PIM3Q86V86 326 aa10.68□□□□□ -0.7
TDP1-211ENST00000555178 KBTBD6Q86V97 674 aa10.68□□□□□ -0.7
TDP1-211ENST00000555178 SERPINA9Q86WD7 417 aa10.68□□□□□ -0.7
TDP1-211ENST00000555178 CEP97Q8IW35 865 aa10.68□□□□□ -0.7
TDP1-211ENST00000555178 CAMKK1Q8N5S9 505 aa10.68□□□□□ -0.7
TDP1-211ENST00000555178 OR2T34Q8NGX1 318 aa10.68□□□□□ -0.7
TDP1-211ENST00000555178 CALML6Q8TD86 181 aa10.68□□□□□ -0.7
TDP1-211ENST00000555178 CENPTQ96BT3 561 aa10.68□□□□□ -0.7
TDP1-211ENST00000555178 AP2M1Q96CW1 435 aa10.68□□□□□ -0.7
TDP1-211ENST00000555178 NUS1Q96E22 293 aa10.68□□□□□ -0.7
TDP1-211ENST00000555178 OLFM1Q99784 485 aa10.68□□□□□ -0.7
TDP1-211ENST00000555178 SPATA16Q9BXB7 569 aa10.68□□□□□ -0.7
TDP1-211ENST00000555178 RHOJQ9H4E5 214 aa10.68□□□□□ -0.7
TDP1-211ENST00000555178 PPCSQ9HAB8 311 aa10.68□□□□□ -0.7
TDP1-211ENST00000555178 SLC39A10Q9ULF5 831 aa10.68□□□□□ -0.7
TDP1-211ENST00000555178 OR1A2Q9Y585 309 aa10.68□□□□□ -0.7
TDP1-211ENST00000555178 PRSS21Q9Y6M0 314 aa10.68□□□□□ -0.7
TDP1-211ENST00000555178 SPEGQ15772 3267 aa10.67□□□□□ -0.7
TDP1-211ENST00000555178 FAM95CA0A1B0GW59 222 aa10.67□□□□□ -0.7
TDP1-211ENST00000555178 HMGB1P1B2RPK0 211 aaPredicted RBP10.67□□□□□ -0.7
TDP1-211ENST00000555178 POLR3GO15318 223 aaPredicted RBP10.67□□□□□ -0.7
TDP1-211ENST00000555178 PHGDHO43175 533 aaKnown RBP10.67□□□□□ -0.7
TDP1-211ENST00000555178 LAMTOR5O43504 91 aa10.67□□□□□ -0.7
TDP1-211ENST00000555178 HRO43593 1189 aa10.67□□□□□ -0.7
TDP1-211ENST00000555178 DNAJC6O75061 913 aa10.67□□□□□ -0.7
TDP1-211ENST00000555178 KRT37O76014 449 aa10.67□□□□□ -0.7
TDP1-211ENST00000555178 KRT38O76015 456 aa10.67□□□□□ -0.7
TDP1-211ENST00000555178 PYGBP11216 843 aa10.67□□□□□ -0.7
TDP1-211ENST00000555178 OGNP20774 298 aaKnown RBP10.67□□□□□ -0.7
TDP1-211ENST00000555178 CSE1LP55060 971 aaKnown RBP10.67□□□□□ -0.7
TDP1-211ENST00000555178 MPP2Q14168 576 aa10.67□□□□□ -0.7
TDP1-211ENST00000555178 SH2D5Q6ZV89 423 aa10.67□□□□□ -0.7
TDP1-211ENST00000555178 ARMCX6Q7L4S7 300 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms