RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 IL7RP16871 459 aa11.79□□□□□ -0.52
XRCC3-208ENST00000554811 GCNT7Q6ZNI0 430 aa11.79□□□□□ -0.52
XRCC3-208ENST00000554811 GALNT5Q7Z7M9 940 aa11.79□□□□□ -0.52
XRCC3-208ENST00000554811 CPSF7Q8N684 471 aaKnown RBP11.79□□□□□ -0.52
XRCC3-208ENST00000554811 EEF1AKMT1Q8WVE0 214 aa11.79□□□□□ -0.52
XRCC3-208ENST00000554811 SLCO4A1Q96BD0 722 aa11.79□□□□□ -0.52
XRCC3-208ENST00000554811 MS4A4AQ96JQ5 239 aa11.79□□□□□ -0.52
XRCC3-208ENST00000554811 ZFYVE28Q9HCC9 887 aa11.79□□□□□ -0.52
XRCC3-208ENST00000554811 CMTM6Q9NX76 183 aa11.79□□□□□ -0.52
XRCC3-208ENST00000554811 VPS4AQ9UN37 437 aa11.79□□□□□ -0.52
XRCC3-208ENST00000554811 SDK1Q7Z5N4 2213 aa11.78□□□□□ -0.52
XRCC3-208ENST00000554811 A0A087WXM4 84 aa11.78□□□□□ -0.52
XRCC3-208ENST00000554811 C2orf81A6NN90 581 aa11.78□□□□□ -0.52
XRCC3-208ENST00000554811 UPK3BL1B0FP48 263 aa11.78□□□□□ -0.52
XRCC3-208ENST00000554811 UPK3BL2E5RIL1 263 aa11.78□□□□□ -0.52
XRCC3-208ENST00000554811 HS6ST1O60243 411 aa11.78□□□□□ -0.52
XRCC3-208ENST00000554811 SLC22A3O75751 556 aa11.78□□□□□ -0.52
XRCC3-208ENST00000554811 ASGR1P07306 291 aa11.78□□□□□ -0.52
XRCC3-208ENST00000554811 CDK4P11802 303 aa11.78□□□□□ -0.52
XRCC3-208ENST00000554811 MERTKQ12866 999 aa11.78□□□□□ -0.52
XRCC3-208ENST00000554811 ARHGEF7Q14155 803 aa11.78□□□□□ -0.52
XRCC3-208ENST00000554811 MAPK11Q15759 364 aa11.78□□□□□ -0.52
XRCC3-208ENST00000554811 C11orf91Q3C1V1 193 aa11.78□□□□□ -0.52
XRCC3-208ENST00000554811 USP50Q70EL3 339 aaPredicted RBP11.78□□□□□ -0.52
XRCC3-208ENST00000554811 DCP1BQ8IZD4 617 aaKnown RBP11.78□□□□□ -0.52
XRCC3-208ENST00000554811 ITFG1Q8TB96 612 aa11.78□□□□□ -0.52
XRCC3-208ENST00000554811 C12orf43Q96C57 262 aaKnown RBP11.78□□□□□ -0.52
XRCC3-208ENST00000554811 MYEOVQ96EZ4 313 aa11.78□□□□□ -0.52
XRCC3-208ENST00000554811 TRIM62Q9BVG3 475 aa11.78□□□□□ -0.52
XRCC3-208ENST00000554811 TREX1Q9NSU2 369 aa11.78□□□□□ -0.52
XRCC3-208ENST00000554811 AASSQ9UDR5 926 aa11.78□□□□□ -0.52
XRCC3-208ENST00000554811 ABT1Q9ULW3 272 aaKnown RBP11.78□□□□□ -0.52
XRCC3-208ENST00000554811 CNTRLQ7Z7A1 2325 aa11.78□□□□□ -0.52
XRCC3-208ENST00000554811 SYCE1LA8MT33 242 aa11.78□□□□□ -0.52
XRCC3-208ENST00000554811 ZNF682O95780 498 aa11.78□□□□□ -0.52
XRCC3-208ENST00000554811 CYBBP04839 570 aa11.78□□□□□ -0.52
XRCC3-208ENST00000554811 CAPN1P07384 714 aa11.78□□□□□ -0.52
XRCC3-208ENST00000554811 HSPA7P48741 367 aa11.78□□□□□ -0.52
XRCC3-208ENST00000554811 GNA12Q03113 381 aa11.78□□□□□ -0.52
XRCC3-208ENST00000554811 ANKDD1AQ495B1 522 aa11.78□□□□□ -0.52
XRCC3-208ENST00000554811 PERM1Q5SV97 790 aa11.78□□□□□ -0.52
XRCC3-208ENST00000554811 GLYATQ6IB77 296 aa11.78□□□□□ -0.52
XRCC3-208ENST00000554811 ZNF549Q6P9A3 640 aa11.78□□□□□ -0.52
XRCC3-208ENST00000554811 MON1AQ86VX9 555 aa11.78□□□□□ -0.52
XRCC3-208ENST00000554811 GIPC3Q8TF64 312 aa11.78□□□□□ -0.52
XRCC3-208ENST00000554811 AURKBQ96GD4 344 aaPredicted RBP11.78□□□□□ -0.52
XRCC3-208ENST00000554811 CDKN2AIPNLQ96HQ2 116 aa11.78□□□□□ -0.52
XRCC3-208ENST00000554811 HAPLN3Q96S86 360 aa11.78□□□□□ -0.52
XRCC3-208ENST00000554811 BEGAINQ9BUH8 593 aa11.78□□□□□ -0.52
XRCC3-208ENST00000554811 CHID1Q9BWS9 393 aa11.78□□□□□ -0.52
XRCC3-208ENST00000554811 FAM124BQ9H5Z6 455 aaPredicted RBP11.78□□□□□ -0.52
XRCC3-208ENST00000554811 GIT1Q9Y2X7 761 aa11.78□□□□□ -0.52
XRCC3-208ENST00000554811 PCDHB5Q9Y5E4 795 aa11.78□□□□□ -0.52
XRCC3-208ENST00000554811 PAPPA2Q9BXP8 1791 aa11.78□□□□□ -0.52
XRCC3-208ENST00000554811 TARM1B6A8C7 271 aa11.78□□□□□ -0.52
XRCC3-208ENST00000554811 RSL1D1O76021 490 aaKnown RBP11.78□□□□□ -0.52
XRCC3-208ENST00000554811 RHOCP08134 193 aa11.78□□□□□ -0.52
XRCC3-208ENST00000554811 ZNF865P0CJ78 1059 aaPredicted RBP11.78□□□□□ -0.52
XRCC3-208ENST00000554811 CD1DP15813 335 aa11.78□□□□□ -0.52
XRCC3-208ENST00000554811 ZNF37AP17032 561 aaPredicted RBP11.78□□□□□ -0.52
XRCC3-208ENST00000554811 GKP32189 559 aa11.78□□□□□ -0.52
XRCC3-208ENST00000554811 HTR6P50406 440 aa11.78□□□□□ -0.52
XRCC3-208ENST00000554811 HERC3Q15034 1050 aa11.78□□□□□ -0.52
XRCC3-208ENST00000554811 CPSF6Q16630 551 aaKnown RBP eCLIP11.78□□□□□ -0.52
XRCC3-208ENST00000554811 ATXN7L2Q5T6C5 722 aaPredicted RBP11.78□□□□□ -0.52
XRCC3-208ENST00000554811 KCTD8Q6ZWB6 473 aa11.78□□□□□ -0.52
XRCC3-208ENST00000554811 PGBD5Q8N414 524 aa11.78□□□□□ -0.52
XRCC3-208ENST00000554811 ITCHQ96J02 903 aa11.78□□□□□ -0.52
XRCC3-208ENST00000554811 C9orf16Q9BUW7 83 aa11.78□□□□□ -0.52
XRCC3-208ENST00000554811 ARHGAP39Q9C0H5 1083 aa11.78□□□□□ -0.52
XRCC3-208ENST00000554811 MEAF6Q9HAF1 191 aa11.78□□□□□ -0.52
XRCC3-208ENST00000554811 WWOXQ9NZC7 414 aa11.78□□□□□ -0.52
XRCC3-208ENST00000554811 SPO11Q9Y5K1 396 aa11.78□□□□□ -0.52
XRCC3-208ENST00000554811 RPP40O75818 363 aaKnown RBP11.77□□□□□ -0.53
XRCC3-208ENST00000554811 DNAJB2P25686 324 aa11.77□□□□□ -0.53
XRCC3-208ENST00000554811 RGRP47804 291 aa11.77□□□□□ -0.53
XRCC3-208ENST00000554811 OR4D2P58180 307 aa11.77□□□□□ -0.53
XRCC3-208ENST00000554811 CHRNB3Q05901 458 aa11.77□□□□□ -0.53
XRCC3-208ENST00000554811 GRM2Q14416 872 aa11.77□□□□□ -0.53
XRCC3-208ENST00000554811 SLC44A4Q53GD3 710 aa11.77□□□□□ -0.53
XRCC3-208ENST00000554811 PRSS55Q6UWB4 352 aaPredicted RBP11.77□□□□□ -0.53
XRCC3-208ENST00000554811 BHLHA9Q7RTU4 235 aa11.77□□□□□ -0.53
XRCC3-208ENST00000554811 IMP4Q96G21 291 aaKnown RBP11.77□□□□□ -0.53
XRCC3-208ENST00000554811 SLC30A3Q99726 388 aa11.77□□□□□ -0.53
XRCC3-208ENST00000554811 SMOC2Q9H3U7 446 aa11.77□□□□□ -0.53
XRCC3-208ENST00000554811 NOL6Q9H6R4 1146 aaKnown RBP11.77□□□□□ -0.53
XRCC3-208ENST00000554811 SMURF2Q9HAU4 748 aa11.77□□□□□ -0.53
XRCC3-208ENST00000554811 FANCEQ9HB96 536 aa11.77□□□□□ -0.53
XRCC3-208ENST00000554811 UBA2Q9UBT2 640 aaPredicted RBP11.77□□□□□ -0.53
XRCC3-208ENST00000554811 LRFN2Q9ULH4 789 aa11.77□□□□□ -0.53
XRCC3-208ENST00000554811 BOLA2-SMG1P6H3BVE0 249 aa11.77□□□□□ -0.53
XRCC3-208ENST00000554811 SLC7A4O43246 635 aa11.77□□□□□ -0.53
XRCC3-208ENST00000554811 SNAP91O60641 907 aa11.77□□□□□ -0.53
XRCC3-208ENST00000554811 ALPIP09923 528 aa11.77□□□□□ -0.53
XRCC3-208ENST00000554811 ZNF182P17025 639 aaPredicted RBP11.77□□□□□ -0.53
XRCC3-208ENST00000554811 RPL9P32969 192 aaKnown RBP11.77□□□□□ -0.53
XRCC3-208ENST00000554811 LEPRP48357 1165 aaKnown RBP11.77□□□□□ -0.53
XRCC3-208ENST00000554811 POLR2JP52435 117 aaKnown RBP11.77□□□□□ -0.53
XRCC3-208ENST00000554811 LCP2Q13094 533 aa11.77□□□□□ -0.53
XRCC3-208ENST00000554811 PTGR1Q14914 329 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms