RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 DOK6Q6PKX4 331 aa10.52□□□□□ -0.73
SHMT2-215ENST00000554656 USP53Q70EK8 1073 aa10.52□□□□□ -0.73
SHMT2-215ENST00000554656 VSIG1Q86XK7 387 aa10.52□□□□□ -0.73
SHMT2-215ENST00000554656 SLC13A5Q86YT5 568 aaPredicted RBP10.52□□□□□ -0.73
SHMT2-215ENST00000554656 RCOR2Q8IZ40 523 aa10.52□□□□□ -0.73
SHMT2-215ENST00000554656 TEX26Q8N6G2 289 aa10.52□□□□□ -0.73
SHMT2-215ENST00000554656 RCBTB1Q8NDN9 531 aa10.52□□□□□ -0.73
SHMT2-215ENST00000554656 TEKT4Q8WW24 435 aa10.52□□□□□ -0.73
SHMT2-215ENST00000554656 EXTL1Q92935 676 aa10.52□□□□□ -0.73
SHMT2-215ENST00000554656 SCAMP4Q969E2 229 aa10.52□□□□□ -0.73
SHMT2-215ENST00000554656 SGF29Q96ES7 293 aa10.52□□□□□ -0.73
SHMT2-215ENST00000554656 SCRN2Q96FV2 425 aa10.52□□□□□ -0.73
SHMT2-215ENST00000554656 CCDC74BQ96LY2 380 aa10.52□□□□□ -0.73
SHMT2-215ENST00000554656 GSDMCQ9BYG8 508 aa10.52□□□□□ -0.73
SHMT2-215ENST00000554656 ABCG8Q9H221 673 aa10.52□□□□□ -0.73
SHMT2-215ENST00000554656 NT5MQ9NPB1 228 aa10.52□□□□□ -0.73
SHMT2-215ENST00000554656 TRNAU1APQ9NX07 287 aaKnown RBP10.52□□□□□ -0.73
SHMT2-215ENST00000554656 TMEM9Q9P0T7 183 aa10.52□□□□□ -0.73
SHMT2-215ENST00000554656 CD84Q9UIB8 345 aa10.52□□□□□ -0.73
SHMT2-215ENST00000554656 ZNF106Q9H2Y7 1883 aaKnown RBP10.52□□□□□ -0.73
SHMT2-215ENST00000554656 UBR5O95071 2799 aaPredicted RBP10.52□□□□□ -0.73
SHMT2-215ENST00000554656 HECTD1Q9ULT8 2610 aa10.52□□□□□ -0.73
SHMT2-215ENST00000554656 A0A1W2PQ67 120 aa10.51□□□□□ -0.73
SHMT2-215ENST00000554656 GOLGA6CA6NDK9 693 aa10.51□□□□□ -0.73
SHMT2-215ENST00000554656 GOLGA6BA6NDN3 693 aa10.51□□□□□ -0.73
SHMT2-215ENST00000554656 CYSRT1A8MQ03 144 aa10.51□□□□□ -0.73
SHMT2-215ENST00000554656 RHPN2P1A8MT19 583 aa10.51□□□□□ -0.73
SHMT2-215ENST00000554656 ZNF487B1APH4 448 aa10.51□□□□□ -0.73
SHMT2-215ENST00000554656 PPM1DO15297 605 aa10.51□□□□□ -0.73
SHMT2-215ENST00000554656 MAP3K6O95382 1288 aa10.51□□□□□ -0.73
SHMT2-215ENST00000554656 EML2O95834 649 aa10.51□□□□□ -0.73
SHMT2-215ENST00000554656 PRLP01236 227 aa10.51□□□□□ -0.73
SHMT2-215ENST00000554656 GOLGA6DP0CG33 693 aa10.51□□□□□ -0.73
SHMT2-215ENST00000554656 PYGMP11217 842 aa10.51□□□□□ -0.73
SHMT2-215ENST00000554656 FGF3P11487 239 aaPredicted RBP10.51□□□□□ -0.73
SHMT2-215ENST00000554656 CYP2A6P11509 494 aaPredicted RBP10.51□□□□□ -0.73
SHMT2-215ENST00000554656 ALDH4A1P30038 563 aa10.51□□□□□ -0.73
SHMT2-215ENST00000554656 TAS2R40P59535 323 aa10.51□□□□□ -0.73
SHMT2-215ENST00000554656 CYP4F2P78329 520 aa10.51□□□□□ -0.73
SHMT2-215ENST00000554656 NFKB2Q00653 900 aa10.51□□□□□ -0.73
SHMT2-215ENST00000554656 DSC2Q02487 901 aa10.51□□□□□ -0.73
SHMT2-215ENST00000554656 DPTQ07507 201 aa10.51□□□□□ -0.73
SHMT2-215ENST00000554656 CYP1B1Q16678 543 aa10.51□□□□□ -0.73
SHMT2-215ENST00000554656 LONRF2Q1L5Z9 754 aa10.51□□□□□ -0.73
SHMT2-215ENST00000554656 BOLA3Q53S33 107 aa10.51□□□□□ -0.73
SHMT2-215ENST00000554656 ARMC12Q5T9G4 340 aa10.51□□□□□ -0.73
SHMT2-215ENST00000554656 MARC1Q5VT66 337 aa10.51□□□□□ -0.73
SHMT2-215ENST00000554656 NKAIN2Q5VXU1 208 aa10.51□□□□□ -0.73
SHMT2-215ENST00000554656 LRRC66Q68CR7 880 aa10.51□□□□□ -0.73
SHMT2-215ENST00000554656 ALG1LQ6GMV1 187 aa10.51□□□□□ -0.73
SHMT2-215ENST00000554656 WDR93Q6P2C0 686 aa10.51□□□□□ -0.73
SHMT2-215ENST00000554656 ADAMTSL4Q6UY14 1074 aa10.51□□□□□ -0.73
SHMT2-215ENST00000554656 PIM3Q86V86 326 aa10.51□□□□□ -0.73
SHMT2-215ENST00000554656 NOA1Q8NC60 698 aaKnown RBP10.51□□□□□ -0.73
SHMT2-215ENST00000554656 FAM71BQ8TC56 605 aa10.51□□□□□ -0.73
SHMT2-215ENST00000554656 LRRN4Q8WUT4 740 aa10.51□□□□□ -0.73
SHMT2-215ENST00000554656 MAML1Q92585 1016 aa10.51□□□□□ -0.73
SHMT2-215ENST00000554656 TMEM159Q96B96 161 aa10.51□□□□□ -0.73
SHMT2-215ENST00000554656 MS4A14Q96JA4 679 aa10.51□□□□□ -0.73
SHMT2-215ENST00000554656 AGAP2Q99490 1192 aa10.51□□□□□ -0.73
SHMT2-215ENST00000554656 CMKLR1Q99788 373 aa10.51□□□□□ -0.73
SHMT2-215ENST00000554656 SEMA3CQ99985 751 aa10.51□□□□□ -0.73
SHMT2-215ENST00000554656 HOMER3Q9NSC5 361 aa10.51□□□□□ -0.73
SHMT2-215ENST00000554656 ARGLU1Q9NWB6 273 aaPredicted RBP10.51□□□□□ -0.73
SHMT2-215ENST00000554656 GOLGA6AQ9NYA3 693 aa10.51□□□□□ -0.73
SHMT2-215ENST00000554656 RAB21Q9UL25 225 aa10.51□□□□□ -0.73
SHMT2-215ENST00000554656 TMEM98Q9Y2Y6 226 aa10.51□□□□□ -0.73
SHMT2-215ENST00000554656 PTPN13Q12923 2485 aa10.5□□□□□ -0.73
SHMT2-215ENST00000554656 IGHV1OR21-1A0A087WYE8 117 aa10.5□□□□□ -0.73
SHMT2-215ENST00000554656 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.5□□□□□ -0.73
SHMT2-215ENST00000554656 SLC28A2O43868 658 aa10.5□□□□□ -0.73
SHMT2-215ENST00000554656 FAM87AP0C7U9 286 aa10.5□□□□□ -0.73
SHMT2-215ENST00000554656 ITGB6P18564 788 aa10.5□□□□□ -0.73
SHMT2-215ENST00000554656 GARSP41250 739 aaKnown RBP10.5□□□□□ -0.73
SHMT2-215ENST00000554656 ACTR1BP42025 376 aa10.5□□□□□ -0.73
SHMT2-215ENST00000554656 GPR1P46091 355 aa10.5□□□□□ -0.73
SHMT2-215ENST00000554656 STC1P52823 247 aa10.5□□□□□ -0.73
SHMT2-215ENST00000554656 LIMK2P53671 638 aa10.5□□□□□ -0.73
SHMT2-215ENST00000554656 CDH6P55285 790 aa10.5□□□□□ -0.73
SHMT2-215ENST00000554656 ACTR1AP61163 376 aa10.5□□□□□ -0.73
SHMT2-215ENST00000554656 PTSQ03393 145 aa10.5□□□□□ -0.73
SHMT2-215ENST00000554656 C2orf54Q08AI8 447 aa10.5□□□□□ -0.73
SHMT2-215ENST00000554656 GALNT2Q10471 571 aa10.5□□□□□ -0.73
SHMT2-215ENST00000554656 NFATC3Q12968 1075 aa10.5□□□□□ -0.73
SHMT2-215ENST00000554656 DHX34Q14147 1143 aaKnown RBP10.5□□□□□ -0.73
SHMT2-215ENST00000554656 DPYSL3Q14195 570 aa10.5□□□□□ -0.73
SHMT2-215ENST00000554656 BRD3Q15059 726 aa10.5□□□□□ -0.73
SHMT2-215ENST00000554656 ATP13A4Q4VNC1 1196 aa10.5□□□□□ -0.73
SHMT2-215ENST00000554656 PYCR3Q53H96 274 aa10.5□□□□□ -0.73
SHMT2-215ENST00000554656 ODF2Q5BJF6 829 aa10.5□□□□□ -0.73
SHMT2-215ENST00000554656 RALGPS1Q5JS13 557 aa10.5□□□□□ -0.73
SHMT2-215ENST00000554656 MANEAQ5SRI9 462 aa10.5□□□□□ -0.73
SHMT2-215ENST00000554656 FAM182AQ5T1J6 154 aa10.5□□□□□ -0.73
SHMT2-215ENST00000554656 NCBP2-AS2Q69YL0 99 aa10.5□□□□□ -0.73
SHMT2-215ENST00000554656 C8orf74Q6P047 294 aa10.5□□□□□ -0.73
SHMT2-215ENST00000554656 USP45Q70EL2 814 aa10.5□□□□□ -0.73
SHMT2-215ENST00000554656 MAATS1Q7Z4T9 603 aa10.5□□□□□ -0.73
SHMT2-215ENST00000554656 ZNF761Q86XN6 746 aaPredicted RBP10.5□□□□□ -0.73
SHMT2-215ENST00000554656 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.5□□□□□ -0.73
SHMT2-215ENST00000554656 ARRDC2Q8TBH0 407 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms