RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 IFI35P80217 286 aaPredicted RBP7.7□□□□□ -1.18
ABCD4-220ENST00000553998 RAD51Q06609 339 aa7.7□□□□□ -1.18
ABCD4-220ENST00000553998 ADCY2Q08462 1091 aa7.7□□□□□ -1.18
ABCD4-220ENST00000553998 NSUN2Q08J23 767 aaKnown RBP eCLIP7.7□□□□□ -1.18
ABCD4-220ENST00000553998 LBRQ14739 615 aaKnown RBP7.7□□□□□ -1.18
ABCD4-220ENST00000553998 PRKD1Q15139 912 aaPredicted RBP7.7□□□□□ -1.18
ABCD4-220ENST00000553998 NOMO1Q15155 1222 aa7.7□□□□□ -1.18
ABCD4-220ENST00000553998 UGP2Q16851 508 aa7.7□□□□□ -1.18
ABCD4-220ENST00000553998 LACTB2Q53H82 288 aaPredicted RBP7.7□□□□□ -1.18
ABCD4-220ENST00000553998 RALGPS1Q5JS13 557 aa7.7□□□□□ -1.18
ABCD4-220ENST00000553998 MARC1Q5VT66 337 aa7.7□□□□□ -1.18
ABCD4-220ENST00000553998 PAPD7Q5XG87 772 aaKnown RBP7.7□□□□□ -1.18
ABCD4-220ENST00000553998 HIST2H2BCQ6DN03 193 aa7.7□□□□□ -1.18
ABCD4-220ENST00000553998 TCTN3Q6NUS6 607 aa7.7□□□□□ -1.18
ABCD4-220ENST00000553998 AADACL2Q6P093 401 aa7.7□□□□□ -1.18
ABCD4-220ENST00000553998 ARHGAP36Q6ZRI8 547 aa7.7□□□□□ -1.18
ABCD4-220ENST00000553998 TAF8Q7Z7C8 310 aa7.7□□□□□ -1.18
ABCD4-220ENST00000553998 RASGEF1CQ8N431 466 aa7.7□□□□□ -1.18
ABCD4-220ENST00000553998 RYBPQ8N488 228 aaPredicted RBP7.7□□□□□ -1.18
ABCD4-220ENST00000553998 TEX26Q8N6G2 289 aa7.7□□□□□ -1.18
ABCD4-220ENST00000553998 BMPERQ8N8U9 685 aa7.7□□□□□ -1.18
ABCD4-220ENST00000553998 CCNYQ8ND76 341 aa7.7□□□□□ -1.18
ABCD4-220ENST00000553998 AGBL5Q8NDL9 886 aa7.7□□□□□ -1.18
ABCD4-220ENST00000553998 OR4D9Q8NGE8 314 aa7.7□□□□□ -1.18
ABCD4-220ENST00000553998 TFB1MQ8WVM0 346 aaKnown RBP7.7□□□□□ -1.18
ABCD4-220ENST00000553998 FUBP1Q96AE4 644 aaKnown RBP7.7□□□□□ -1.18
ABCD4-220ENST00000553998 HAUS1Q96CS2 278 aa7.7□□□□□ -1.18
ABCD4-220ENST00000553998 CCDC74BQ96LY2 380 aa7.7□□□□□ -1.18
ABCD4-220ENST00000553998 GDAP1L1Q96MZ0 367 aa7.7□□□□□ -1.18
ABCD4-220ENST00000553998 TEFMQ96QE5 360 aaKnown RBP7.7□□□□□ -1.18
ABCD4-220ENST00000553998 PSKH2Q96QS6 385 aa7.7□□□□□ -1.18
ABCD4-220ENST00000553998 WDR24Q96S15 920 aa7.7□□□□□ -1.18
ABCD4-220ENST00000553998 NAP1L3Q99457 506 aaPredicted RBP7.7□□□□□ -1.18
ABCD4-220ENST00000553998 NAPGQ99747 312 aaPredicted RBP7.7□□□□□ -1.18
ABCD4-220ENST00000553998 DPYSL5Q9BPU6 564 aa7.7□□□□□ -1.18
ABCD4-220ENST00000553998 FERMT1Q9BQL6 677 aa7.7□□□□□ -1.18
ABCD4-220ENST00000553998 NUDT22Q9BRQ3 303 aa7.7□□□□□ -1.18
ABCD4-220ENST00000553998 HERPUD2Q9BSE4 406 aa7.7□□□□□ -1.18
ABCD4-220ENST00000553998 WRAP53Q9BUR4 548 aaKnown RBP7.7□□□□□ -1.18
ABCD4-220ENST00000553998 CINPQ9BW66 212 aaPredicted RBP7.7□□□□□ -1.18
ABCD4-220ENST00000553998 TMEM168Q9H0V1 697 aa7.7□□□□□ -1.18
ABCD4-220ENST00000553998 RDH14Q9HBH5 336 aa7.7□□□□□ -1.18
ABCD4-220ENST00000553998 FGF22Q9HCT0 170 aa7.7□□□□□ -1.18
ABCD4-220ENST00000553998 SPATS2LQ9NUQ6 558 aaKnown RBP7.7□□□□□ -1.18
ABCD4-220ENST00000553998 KCNK4Q9NYG8 393 aa7.7□□□□□ -1.18
ABCD4-220ENST00000553998 SNX12Q9UMY4 172 aa7.7□□□□□ -1.18
ABCD4-220ENST00000553998 COQ6Q9Y2Z9 468 aa7.7□□□□□ -1.18
ABCD4-220ENST00000553998 SCN8AQ9UQD0 1980 aa7.7□□□□□ -1.18
ABCD4-220ENST00000553998 SPTBN1Q01082 2364 aaKnown RBP7.69□□□□□ -1.18
ABCD4-220ENST00000553998 PRR19A6NJB7 356 aa7.69□□□□□ -1.18
ABCD4-220ENST00000553998 KIF2AO00139 706 aaPredicted RBP7.69□□□□□ -1.18
ABCD4-220ENST00000553998 DUX1O43812 170 aa7.69□□□□□ -1.18
ABCD4-220ENST00000553998 CEP104O60308 925 aa7.69□□□□□ -1.18
ABCD4-220ENST00000553998 IGSF6O95976 241 aa7.69□□□□□ -1.18
ABCD4-220ENST00000553998 THRAP10827 490 aa7.69□□□□□ -1.18
ABCD4-220ENST00000553998 CCNB1P14635 433 aa7.69□□□□□ -1.18
ABCD4-220ENST00000553998 PECAM1P16284 738 aaPredicted RBP7.69□□□□□ -1.18
ABCD4-220ENST00000553998 CES1P23141 567 aa7.69□□□□□ -1.18
ABCD4-220ENST00000553998 KELP23276 732 aa7.69□□□□□ -1.18
ABCD4-220ENST00000553998 MMP13P45452 471 aa7.69□□□□□ -1.18
ABCD4-220ENST00000553998 LIG3P49916 1009 aa7.69□□□□□ -1.18
ABCD4-220ENST00000553998 RAB15P59190 212 aa7.69□□□□□ -1.18
ABCD4-220ENST00000553998 MC1RQ01726 317 aa7.69□□□□□ -1.18
ABCD4-220ENST00000553998 OTUD4Q01804 1114 aaKnown RBP7.69□□□□□ -1.18
ABCD4-220ENST00000553998 ABHD18Q0P651 414 aa7.69□□□□□ -1.18
ABCD4-220ENST00000553998 CDC20Q12834 499 aa7.69□□□□□ -1.18
ABCD4-220ENST00000553998 ZNF235Q14590 738 aa7.69□□□□□ -1.18
ABCD4-220ENST00000553998 GRM3Q14832 879 aa7.69□□□□□ -1.18
ABCD4-220ENST00000553998 LLGL1Q15334 1064 aa7.69□□□□□ -1.18
ABCD4-220ENST00000553998 CYTH1Q15438 398 aa7.69□□□□□ -1.18
ABCD4-220ENST00000553998 MAP9Q49MG5 647 aa7.69□□□□□ -1.18
ABCD4-220ENST00000553998 LRRC73Q5JTD7 316 aa7.69□□□□□ -1.18
ABCD4-220ENST00000553998 ATXN7L2Q5T6C5 722 aaPredicted RBP7.69□□□□□ -1.18
ABCD4-220ENST00000553998 DCAF12Q5T6F0 453 aa7.69□□□□□ -1.18
ABCD4-220ENST00000553998 CAPRIN2Q6IMN6 1127 aaKnown RBP7.69□□□□□ -1.18
ABCD4-220ENST00000553998 NPNTQ6UXI9 565 aa7.69□□□□□ -1.18
ABCD4-220ENST00000553998 NRROSQ86YC3 692 aa7.69□□□□□ -1.18
ABCD4-220ENST00000553998 CDKL3Q8IVW4 592 aaPredicted RBP7.69□□□□□ -1.18
ABCD4-220ENST00000553998 C17orf53Q8N3J3 647 aaPredicted RBP7.69□□□□□ -1.18
ABCD4-220ENST00000553998 NETO2Q8NC67 525 aa7.69□□□□□ -1.18
ABCD4-220ENST00000553998 PLA2G15Q8NCC3 412 aa7.69□□□□□ -1.18
ABCD4-220ENST00000553998 GALNT11Q8NCW6 608 aa7.69□□□□□ -1.18
ABCD4-220ENST00000553998 RCBTB1Q8NDN9 531 aa7.69□□□□□ -1.18
ABCD4-220ENST00000553998 CCL4L1Q8NHW4 92 aa7.69□□□□□ -1.18
ABCD4-220ENST00000553998 SLC35B2Q8TB61 432 aa7.69□□□□□ -1.18
ABCD4-220ENST00000553998 ACTL9Q8TC94 416 aa7.69□□□□□ -1.18
ABCD4-220ENST00000553998 ACTRT1Q8TDG2 376 aa7.69□□□□□ -1.18
ABCD4-220ENST00000553998 ZNF641Q96N77 438 aaPredicted RBP7.69□□□□□ -1.18
ABCD4-220ENST00000553998 QKIQ96PU8 341 aaKnown RBP eCLIP7.69□□□□□ -1.18
ABCD4-220ENST00000553998 TUBGCP5Q96RT8 1024 aa7.69□□□□□ -1.18
ABCD4-220ENST00000553998 OSBPL9Q96SU4 736 aa7.69□□□□□ -1.18
ABCD4-220ENST00000553998 VAT1Q99536 393 aa7.69□□□□□ -1.18
ABCD4-220ENST00000553998 MGME1Q9BQP7 344 aa7.69□□□□□ -1.18
ABCD4-220ENST00000553998 ZPBPQ9BS86 351 aa7.69□□□□□ -1.18
ABCD4-220ENST00000553998 DPEP2Q9H4A9 486 aa7.69□□□□□ -1.18
ABCD4-220ENST00000553998 PCDH12Q9NPG4 1184 aa7.69□□□□□ -1.18
ABCD4-220ENST00000553998 MRPL40Q9NQ50 206 aaKnown RBP7.69□□□□□ -1.18
ABCD4-220ENST00000553998 HOMER3Q9NSC5 361 aa7.69□□□□□ -1.18
ABCD4-220ENST00000553998 CUEDC1Q9NWM3 386 aaPredicted RBP7.69□□□□□ -1.18
ABCD4-220ENST00000553998 LHX3Q9UBR4 397 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms