RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 MAP9Q49MG5 647 aa18.04■□□□□ 0.48
SHMT2-206ENST00000553529 PHF19Q5T6S3 580 aa18.04■□□□□ 0.48
SHMT2-206ENST00000553529 RAB11FIP2Q7L804 512 aa18.04■□□□□ 0.48
SHMT2-206ENST00000553529 ZNF438Q7Z4V0 828 aa18.04■□□□□ 0.48
SHMT2-206ENST00000553529 ADGRG6Q86SQ4 1221 aa18.04■□□□□ 0.48
SHMT2-206ENST00000553529 WDR36Q8NI36 951 aaKnown RBP18.04■□□□□ 0.48
SHMT2-206ENST00000553529 KIAA1524Q8TCG1 905 aa18.04■□□□□ 0.48
SHMT2-206ENST00000553529 CCHCR1Q8TD31 782 aa18.04■□□□□ 0.48
SHMT2-206ENST00000553529 ZNF578Q96N58 590 aaPredicted RBP18.04■□□□□ 0.48
SHMT2-206ENST00000553529 FCRL3Q96P31 734 aaPredicted RBP18.04■□□□□ 0.48
SHMT2-206ENST00000553529 BAG1Q99933 345 aaPredicted RBP18.04■□□□□ 0.48
SHMT2-206ENST00000553529 CDH19Q9H159 772 aa18.04■□□□□ 0.48
SHMT2-206ENST00000553529 MAGEE1Q9HCI5 957 aa18.04■□□□□ 0.48
SHMT2-206ENST00000553529 PRDM8Q9NQV8 689 aa18.04■□□□□ 0.48
SHMT2-206ENST00000553529 WDR70Q9NW82 654 aa18.04■□□□□ 0.48
SHMT2-206ENST00000553529 KCTD5Q9NXV2 234 aa18.04■□□□□ 0.48
SHMT2-206ENST00000553529 FOXJ2Q9P0K8 574 aa18.04■□□□□ 0.48
SHMT2-206ENST00000553529 RSPH14Q9UHP6 348 aa18.04■□□□□ 0.48
SHMT2-206ENST00000553529 LOXL2Q9Y4K0 774 aa18.04■□□□□ 0.48
SHMT2-206ENST00000553529 KCTD3Q9Y597 815 aa18.04■□□□□ 0.48
SHMT2-206ENST00000553529 PCDHA3Q9Y5H8 950 aa18.04■□□□□ 0.48
SHMT2-206ENST00000553529 BPTFQ12830 3046 aa18.04■□□□□ 0.48
SHMT2-206ENST00000553529 UNC13CQ8NB66 2214 aa18.03■□□□□ 0.48
SHMT2-206ENST00000553529 LOC285095A0A1B0GVY8 99 aa18.03■□□□□ 0.48
SHMT2-206ENST00000553529 PLD2O14939 933 aa18.03■□□□□ 0.48
SHMT2-206ENST00000553529 PJA2O43164 708 aa18.03■□□□□ 0.48
SHMT2-206ENST00000553529 KLK10O43240 276 aa18.03■□□□□ 0.48
SHMT2-206ENST00000553529 CCL4P13236 92 aa18.03■□□□□ 0.48
SHMT2-206ENST00000553529 SPARCL1Q14515 664 aa18.03■□□□□ 0.48
SHMT2-206ENST00000553529 PPP2R5EQ16537 467 aa18.03■□□□□ 0.48
SHMT2-206ENST00000553529 ATP13A5Q4VNC0 1218 aa18.03■□□□□ 0.48
SHMT2-206ENST00000553529 LRRC69Q6ZNQ3 347 aa18.03■□□□□ 0.48
SHMT2-206ENST00000553529 NLRP8Q86W28 1048 aa18.03■□□□□ 0.48
SHMT2-206ENST00000553529 FBXO39Q8N4B4 442 aa18.03■□□□□ 0.48
SHMT2-206ENST00000553529 TAB3Q8N5C8 712 aaPredicted RBP18.03■□□□□ 0.48
SHMT2-206ENST00000553529 CCDC110Q8TBZ0 833 aa18.03■□□□□ 0.48
SHMT2-206ENST00000553529 BLOC1S5Q8TDH9 187 aa18.03■□□□□ 0.48
SHMT2-206ENST00000553529 KCNE4Q8WWG9 221 aa18.03■□□□□ 0.48
SHMT2-206ENST00000553529 RBM41Q96IZ5 413 aaKnown RBP18.03■□□□□ 0.48
SHMT2-206ENST00000553529 FICDQ9BVA6 458 aa18.03■□□□□ 0.48
SHMT2-206ENST00000553529 FAM153AQ9UHL3 310 aa18.03■□□□□ 0.48
SHMT2-206ENST00000553529 R3HDM2Q9Y2K5 976 aaKnown RBP18.03■□□□□ 0.48
SHMT2-206ENST00000553529 CAPN6Q9Y6Q1 641 aa18.03■□□□□ 0.48
SHMT2-206ENST00000553529 A6NCN8 305 aa18.02■□□□□ 0.48
SHMT2-206ENST00000553529 GAPDHSO14556 408 aaPredicted RBP18.02■□□□□ 0.48
SHMT2-206ENST00000553529 DDX3YO15523 660 aaKnown RBP18.02■□□□□ 0.48
SHMT2-206ENST00000553529 RRP8O43159 456 aaKnown RBP18.02■□□□□ 0.48
SHMT2-206ENST00000553529 UGT1A9O60656 530 aa18.02■□□□□ 0.48
SHMT2-206ENST00000553529 UGT1A6P19224 532 aa18.02■□□□□ 0.48
SHMT2-206ENST00000553529 UGT1A1P22309 533 aa18.02■□□□□ 0.48
SHMT2-206ENST00000553529 UGT1A4P22310 534 aa18.02■□□□□ 0.48
SHMT2-206ENST00000553529 CTNNA2P26232 953 aa18.02■□□□□ 0.48
SHMT2-206ENST00000553529 PSMB4P28070 264 aa18.02■□□□□ 0.48
SHMT2-206ENST00000553529 RBMS1P29558 406 aaKnown RBP18.02■□□□□ 0.48
SHMT2-206ENST00000553529 SLC5A2P31639 672 aa18.02■□□□□ 0.48
SHMT2-206ENST00000553529 UGT1A3P35503 534 aa18.02■□□□□ 0.48
SHMT2-206ENST00000553529 NFATC2Q13469 925 aa18.02■□□□□ 0.48
SHMT2-206ENST00000553529 SEPT7Q16181 437 aaKnown RBP18.02■□□□□ 0.48
SHMT2-206ENST00000553529 ZNF569Q5MCW4 686 aa18.02■□□□□ 0.48
SHMT2-206ENST00000553529 PCSK4Q6UW60 755 aa18.02■□□□□ 0.48
SHMT2-206ENST00000553529 KIAA1328Q86T90 577 aa18.02■□□□□ 0.48
SHMT2-206ENST00000553529 JAMLQ86YT9 394 aa18.02■□□□□ 0.48
SHMT2-206ENST00000553529 ZNF547Q8IVP9 402 aa18.02■□□□□ 0.48
SHMT2-206ENST00000553529 ZNF248Q8NDW4 579 aa18.02■□□□□ 0.48
SHMT2-206ENST00000553529 LIN37Q96GY3 246 aaPredicted RBP18.02■□□□□ 0.48
SHMT2-206ENST00000553529 CCDC74BQ96LY2 380 aa18.02■□□□□ 0.48
SHMT2-206ENST00000553529 FCRL5Q96RD9 977 aa18.02■□□□□ 0.48
SHMT2-206ENST00000553529 OSBPL8Q9BZF1 889 aa18.02■□□□□ 0.48
SHMT2-206ENST00000553529 UGT1A7Q9HAW7 530 aa18.02■□□□□ 0.48
SHMT2-206ENST00000553529 UGT1A10Q9HAW8 530 aa18.02■□□□□ 0.48
SHMT2-206ENST00000553529 UGT1A8Q9HAW9 530 aa18.02■□□□□ 0.48
SHMT2-206ENST00000553529 HAUS2Q9NVX0 235 aa18.02■□□□□ 0.48
SHMT2-206ENST00000553529 DNPEPQ9ULA0 475 aa18.02■□□□□ 0.48
SHMT2-206ENST00000553529 DNAJC16Q9Y2G8 782 aa18.02■□□□□ 0.48
SHMT2-206ENST00000553529 PCDHGA8Q9Y5G5 932 aa18.02■□□□□ 0.48
SHMT2-206ENST00000553529 IGHV1OR21-1A0A087WYE8 117 aa18.01■□□□□ 0.47
SHMT2-206ENST00000553529 IGHV5-10-1A0A0J9YXX1 117 aa18.01■□□□□ 0.47
SHMT2-206ENST00000553529 APOC4-APOC2K7ER74 178 aa18.01■□□□□ 0.47
SHMT2-206ENST00000553529 CCL22O00626 93 aa18.01■□□□□ 0.47
SHMT2-206ENST00000553529 GRID2O43424 1007 aa18.01■□□□□ 0.47
SHMT2-206ENST00000553529 NUAK1O60285 661 aa18.01■□□□□ 0.47
SHMT2-206ENST00000553529 PRAMEF10O60809 474 aa18.01■□□□□ 0.47
SHMT2-206ENST00000553529 SLC25A14O95258 325 aaPredicted RBP18.01■□□□□ 0.47
SHMT2-206ENST00000553529 APOC2P02655 101 aa18.01■□□□□ 0.47
SHMT2-206ENST00000553529 CCKBRP32239 447 aa18.01■□□□□ 0.47
SHMT2-206ENST00000553529 ARSDP51689 593 aa18.01■□□□□ 0.47
SHMT2-206ENST00000553529 MAPK10P53779 464 aa18.01■□□□□ 0.47
SHMT2-206ENST00000553529 EIF3EP60228 445 aaKnown RBP18.01■□□□□ 0.47
SHMT2-206ENST00000553529 ERVPABLB-1P60509 514 aa18.01■□□□□ 0.47
SHMT2-206ENST00000553529 CLN3Q13286 438 aa18.01■□□□□ 0.47
SHMT2-206ENST00000553529 NR1D2Q14995 579 aa18.01■□□□□ 0.47
SHMT2-206ENST00000553529 SLC1A5Q15758 541 aa18.01■□□□□ 0.47
SHMT2-206ENST00000553529 CHRNA6Q15825 494 aa18.01■□□□□ 0.47
SHMT2-206ENST00000553529 ARHGAP40Q5TG30 622 aa18.01■□□□□ 0.47
SHMT2-206ENST00000553529 FAM151BQ6UXP7 276 aa18.01■□□□□ 0.47
SHMT2-206ENST00000553529 SFRP1Q8N474 314 aa18.01■□□□□ 0.47
SHMT2-206ENST00000553529 TRAM1L1Q8N609 369 aa18.01■□□□□ 0.47
SHMT2-206ENST00000553529 GLYATL1Q969I3 302 aa18.01■□□□□ 0.47
SHMT2-206ENST00000553529 IL26Q9NPH9 171 aa18.01■□□□□ 0.47
SHMT2-206ENST00000553529 THSD1Q9NS62 852 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms