RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 WIPF3A6NGB9 483 aa5.77□□□□□ -1.49
SCFD1-208ENST00000553278 C2CD4BA6NLJ0 364 aa5.77□□□□□ -1.49
SCFD1-208ENST00000553278 SMIM22K7EJ46 135 aa5.77□□□□□ -1.49
SCFD1-208ENST00000553278 PGRMC2O15173 223 aa5.77□□□□□ -1.49
SCFD1-208ENST00000553278 UGDHO60701 494 aa5.77□□□□□ -1.49
SCFD1-208ENST00000553278 OLFM2O95897 454 aa5.77□□□□□ -1.49
SCFD1-208ENST00000553278 VIMP08670 466 aaKnown RBP5.77□□□□□ -1.49
SCFD1-208ENST00000553278 FAM58BPP0C7Q3 252 aa5.77□□□□□ -1.49
SCFD1-208ENST00000553278 CYP2A6P11509 494 aaPredicted RBP5.77□□□□□ -1.49
SCFD1-208ENST00000553278 GAP43P17677 238 aa5.77□□□□□ -1.49
SCFD1-208ENST00000553278 KIF5BP33176 963 aa5.77□□□□□ -1.49
SCFD1-208ENST00000553278 CASP3P42574 277 aa5.77□□□□□ -1.49
SCFD1-208ENST00000553278 NAGLUP54802 743 aa5.77□□□□□ -1.49
SCFD1-208ENST00000553278 ARF5P84085 180 aa5.77□□□□□ -1.49
SCFD1-208ENST00000553278 IL1RL1Q01638 556 aa5.77□□□□□ -1.49
SCFD1-208ENST00000553278 ACSM1Q08AH1 577 aa5.77□□□□□ -1.49
SCFD1-208ENST00000553278 HSPB3Q12988 150 aa5.77□□□□□ -1.49
SCFD1-208ENST00000553278 GRIK2Q13002 908 aa5.77□□□□□ -1.49
SCFD1-208ENST00000553278 NEDD9Q14511 834 aa5.77□□□□□ -1.49
SCFD1-208ENST00000553278 LASP1Q14847 261 aaKnown RBP5.77□□□□□ -1.49
SCFD1-208ENST00000553278 SMN1Q16637 294 aaKnown RBP5.77□□□□□ -1.49
SCFD1-208ENST00000553278 VWC2Q2TAL6 325 aa5.77□□□□□ -1.49
SCFD1-208ENST00000553278 GGNBP1Q5YKI7 109 aa5.77□□□□□ -1.49
SCFD1-208ENST00000553278 FAM91A1Q658Y4 838 aa5.77□□□□□ -1.49
SCFD1-208ENST00000553278 METTL2BQ6P1Q9 378 aaKnown RBP5.77□□□□□ -1.49
SCFD1-208ENST00000553278 ABI3BPQ7Z7G0 1075 aa5.77□□□□□ -1.49
SCFD1-208ENST00000553278 DZIP1Q86YF9 867 aaKnown RBP5.77□□□□□ -1.49
SCFD1-208ENST00000553278 C1QL4Q86Z23 238 aa5.77□□□□□ -1.49
SCFD1-208ENST00000553278 SFTPA2Q8IWL1 248 aa5.77□□□□□ -1.49
SCFD1-208ENST00000553278 PNLDC1Q8NA58 520 aaKnown RBP5.77□□□□□ -1.49
SCFD1-208ENST00000553278 NHLRC2Q8NBF2 726 aa5.77□□□□□ -1.49
SCFD1-208ENST00000553278 AGBL3Q8NEM8 1001 aa5.77□□□□□ -1.49
SCFD1-208ENST00000553278 OSR1Q8TAX0 266 aaPredicted RBP5.77□□□□□ -1.49
SCFD1-208ENST00000553278 GRAPLQ8TC17 118 aaPredicted RBP5.77□□□□□ -1.49
SCFD1-208ENST00000553278 TAS1R2Q8TE23 839 aa5.77□□□□□ -1.49
SCFD1-208ENST00000553278 METTL2AQ96IZ6 378 aaKnown RBP5.77□□□□□ -1.49
SCFD1-208ENST00000553278 MS4A10Q96PG2 267 aa5.77□□□□□ -1.49
SCFD1-208ENST00000553278 NEK1Q96PY6 1258 aa5.77□□□□□ -1.49
SCFD1-208ENST00000553278 PPIL3Q9H2H8 161 aaKnown RBP5.77□□□□□ -1.49
SCFD1-208ENST00000553278 ERAP1Q9NZ08 941 aa5.77□□□□□ -1.49
SCFD1-208ENST00000553278 SEPT10Q9P0V9 454 aa5.77□□□□□ -1.49
SCFD1-208ENST00000553278 SNX7Q9UNH6 387 aa5.77□□□□□ -1.49
SCFD1-208ENST00000553278 MTF2Q9Y483 593 aaPredicted RBP5.77□□□□□ -1.49
SCFD1-208ENST00000553278 EPN1Q9Y6I3 576 aaPredicted RBP5.77□□□□□ -1.49
SCFD1-208ENST00000553278 STON1Q9Y6Q2 735 aa5.77□□□□□ -1.49
SCFD1-208ENST00000553278 ZNF541Q9H0D2 1346 aa5.76□□□□□ -1.49
SCFD1-208ENST00000553278 GCNT3O95395 438 aa5.76□□□□□ -1.49
SCFD1-208ENST00000553278 ADRA2CP18825 462 aa5.76□□□□□ -1.49
SCFD1-208ENST00000553278 MAPK3P27361 379 aaPredicted RBP5.76□□□□□ -1.49
SCFD1-208ENST00000553278 CDC25CP30307 473 aa5.76□□□□□ -1.49
SCFD1-208ENST00000553278 DCTDP32321 178 aa5.76□□□□□ -1.49
SCFD1-208ENST00000553278 HPDP32754 393 aaPredicted RBP5.76□□□□□ -1.49
SCFD1-208ENST00000553278 TNFSF8P32971 234 aa5.76□□□□□ -1.49
SCFD1-208ENST00000553278 SOAT1P35610 550 aa5.76□□□□□ -1.49
SCFD1-208ENST00000553278 NT5C2P49902 561 aa5.76□□□□□ -1.49
SCFD1-208ENST00000553278 METAP2P50579 478 aaKnown RBP eCLIP5.76□□□□□ -1.49
SCFD1-208ENST00000553278 ZNF131P52739 623 aa5.76□□□□□ -1.49
SCFD1-208ENST00000553278 EVCP57679 992 aa5.76□□□□□ -1.49
SCFD1-208ENST00000553278 PPP2R2BQ00005 443 aa5.76□□□□□ -1.49
SCFD1-208ENST00000553278 PPATQ06203 517 aa5.76□□□□□ -1.49
SCFD1-208ENST00000553278 SPOCK1Q08629 439 aa5.76□□□□□ -1.49
SCFD1-208ENST00000553278 FOXI1Q12951 378 aa5.76□□□□□ -1.49
SCFD1-208ENST00000553278 ATP13A5Q4VNC0 1218 aa5.76□□□□□ -1.49
SCFD1-208ENST00000553278 DCAF6Q58WW2 860 aa5.76□□□□□ -1.49
SCFD1-208ENST00000553278 EARS2Q5JPH6 523 aaKnown RBP5.76□□□□□ -1.49
SCFD1-208ENST00000553278 SHEQ5VZ18 495 aa5.76□□□□□ -1.49
SCFD1-208ENST00000553278 PAPD4Q6PIY7 484 aaKnown RBP5.76□□□□□ -1.49
SCFD1-208ENST00000553278 ZBTB49Q6ZSB9 765 aa5.76□□□□□ -1.49
SCFD1-208ENST00000553278 TMEM173Q86WV6 379 aaPredicted RBP5.76□□□□□ -1.49
SCFD1-208ENST00000553278 CHSY1Q86X52 802 aa5.76□□□□□ -1.49
SCFD1-208ENST00000553278 RBFAQ8N0V3 343 aa5.76□□□□□ -1.49
SCFD1-208ENST00000553278 SPATA6LQ8N4H0 392 aa5.76□□□□□ -1.49
SCFD1-208ENST00000553278 OR1J2Q8NGS2 313 aa5.76□□□□□ -1.49
SCFD1-208ENST00000553278 HM13Q8TCT9 377 aa5.76□□□□□ -1.49
SCFD1-208ENST00000553278 TAF4BQ92750 862 aa5.76□□□□□ -1.49
SCFD1-208ENST00000553278 TEKT1Q969V4 418 aa5.76□□□□□ -1.49
SCFD1-208ENST00000553278 SPSB1Q96BD6 273 aa5.76□□□□□ -1.49
SCFD1-208ENST00000553278 LRRC3BQ96PB8 259 aa5.76□□□□□ -1.49
SCFD1-208ENST00000553278 TMEM237Q96Q45 408 aa5.76□□□□□ -1.49
SCFD1-208ENST00000553278 PARK7Q99497 189 aaKnown RBP5.76□□□□□ -1.49
SCFD1-208ENST00000553278 INPP5KQ9BT40 448 aa5.76□□□□□ -1.49
SCFD1-208ENST00000553278 EFHD1Q9BUP0 239 aa5.76□□□□□ -1.49
SCFD1-208ENST00000553278 BDH2Q9BUT1 245 aa5.76□□□□□ -1.49
SCFD1-208ENST00000553278 KRTAP17-1Q9BYP8 105 aa5.76□□□□□ -1.49
SCFD1-208ENST00000553278 TMEM39BQ9GZU3 492 aa5.76□□□□□ -1.49
SCFD1-208ENST00000553278 MKKSQ9NPJ1 570 aaPredicted RBP5.76□□□□□ -1.49
SCFD1-208ENST00000553278 EQTNQ9NQ60 294 aa5.76□□□□□ -1.49
SCFD1-208ENST00000553278 ACSS1Q9NUB1 689 aaPredicted RBP5.76□□□□□ -1.49
SCFD1-208ENST00000553278 HPF1Q9NWY4 346 aa5.76□□□□□ -1.49
SCFD1-208ENST00000553278 STK26Q9P289 416 aa5.76□□□□□ -1.49
SCFD1-208ENST00000553278 STK39Q9UEW8 545 aa5.76□□□□□ -1.49
SCFD1-208ENST00000553278 SPAG9O60271 1321 aaKnown RBP5.75□□□□□ -1.49
SCFD1-208ENST00000553278 TMEM8BA6NDV4 472 aa5.75□□□□□ -1.49
SCFD1-208ENST00000553278 K7ESM1 405 aa5.75□□□□□ -1.49
SCFD1-208ENST00000553278 M0QZ24 198 aa5.75□□□□□ -1.49
SCFD1-208ENST00000553278 CPLX1O14810 134 aa5.75□□□□□ -1.49
SCFD1-208ENST00000553278 SEC22BO75396 215 aa5.75□□□□□ -1.49
SCFD1-208ENST00000553278 CLDN7O95471 211 aa5.75□□□□□ -1.49
SCFD1-208ENST00000553278 EEF2P13639 858 aaKnown RBP5.75□□□□□ -1.49
SCFD1-208ENST00000553278 DDX5P17844 614 aaKnown RBP5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms