RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 YWHAHQ04917 246 aaPredicted RBP12.29□□□□□ -0.44
HDAC7-230ENST00000552960 PCBP1Q15365 356 aaKnown RBP eCLIP12.29□□□□□ -0.443e-7■■■■□ 25.7
HDAC7-230ENST00000552960 UGT3A2Q3SY77 523 aa12.29□□□□□ -0.44
HDAC7-230ENST00000552960 SV2CQ496J9 727 aa12.29□□□□□ -0.44
HDAC7-230ENST00000552960 UNC50Q53HI1 259 aa12.29□□□□□ -0.44
HDAC7-230ENST00000552960 ZNF678Q5SXM1 525 aa12.29□□□□□ -0.44
HDAC7-230ENST00000552960 TMEM207Q6UWW9 146 aa12.29□□□□□ -0.44
HDAC7-230ENST00000552960 PACRGLQ8N7B6 248 aa12.29□□□□□ -0.44
HDAC7-230ENST00000552960 LINC01599Q8WXQ3 324 aa12.29□□□□□ -0.44
HDAC7-230ENST00000552960 ZUFSPQ96AP4 578 aa12.29□□□□□ -0.44
HDAC7-230ENST00000552960 NRBF2Q96F24 287 aa12.29□□□□□ -0.44
HDAC7-230ENST00000552960 SLC2A13Q96QE2 648 aa12.29□□□□□ -0.44
HDAC7-230ENST00000552960 HBEGFQ99075 208 aa12.29□□□□□ -0.44
HDAC7-230ENST00000552960 CHID1Q9BWS9 393 aa12.29□□□□□ -0.44
HDAC7-230ENST00000552960 CCDC68Q9H2F9 335 aa12.29□□□□□ -0.44
HDAC7-230ENST00000552960 RGS18Q9NS28 235 aa12.29□□□□□ -0.44
HDAC7-230ENST00000552960 EXD2Q9NVH0 621 aa12.29□□□□□ -0.44
HDAC7-230ENST00000552960 KCTD3Q9Y597 815 aa12.29□□□□□ -0.44
HDAC7-230ENST00000552960 A0A1W2PQ45 241 aaPredicted RBP12.29□□□□□ -0.44
HDAC7-230ENST00000552960 A0A1W2PQY0 241 aa12.29□□□□□ -0.44
HDAC7-230ENST00000552960 AP3B1O00203 1094 aa12.29□□□□□ -0.44
HDAC7-230ENST00000552960 AZIN1O14977 448 aa12.29□□□□□ -0.44
HDAC7-230ENST00000552960 GPR182O15218 404 aa12.29□□□□□ -0.44
HDAC7-230ENST00000552960 XYLBO75191 536 aa12.29□□□□□ -0.44
HDAC7-230ENST00000552960 CDK14O94921 469 aa12.29□□□□□ -0.44
HDAC7-230ENST00000552960 PIRTP0C851 137 aa12.29□□□□□ -0.44
HDAC7-230ENST00000552960 GSTT2P0CG29 244 aa12.29□□□□□ -0.44
HDAC7-230ENST00000552960 GSTT2BP0CG30 244 aa12.29□□□□□ -0.44
HDAC7-230ENST00000552960 GATMP50440 423 aa12.29□□□□□ -0.44
HDAC7-230ENST00000552960 CSRP3P50461 194 aa12.29□□□□□ -0.44
HDAC7-230ENST00000552960 IST1P53990 364 aa12.29□□□□□ -0.44
HDAC7-230ENST00000552960 GEMP55040 296 aa12.29□□□□□ -0.44
HDAC7-230ENST00000552960 SEMA3BQ13214 749 aa12.29□□□□□ -0.44
HDAC7-230ENST00000552960 POLD3Q15054 466 aaPredicted RBP12.29□□□□□ -0.44
HDAC7-230ENST00000552960 PYCR3Q53H96 274 aa12.29□□□□□ -0.44
HDAC7-230ENST00000552960 TRAF7Q6Q0C0 670 aa12.29□□□□□ -0.44
HDAC7-230ENST00000552960 CD300LGQ6UXG3 332 aa12.29□□□□□ -0.44
HDAC7-230ENST00000552960 RNF180Q86T96 592 aa12.29□□□□□ -0.44
HDAC7-230ENST00000552960 TAC4Q86UU9 113 aa12.29□□□□□ -0.44
HDAC7-230ENST00000552960 ZNF420Q8TAQ5 688 aaPredicted RBP12.29□□□□□ -0.44
HDAC7-230ENST00000552960 SNX19Q92543 992 aa12.29□□□□□ -0.44
HDAC7-230ENST00000552960 PTERQ96BW5 349 aa12.29□□□□□ -0.44
HDAC7-230ENST00000552960 TAMM41Q96BW9 452 aa12.29□□□□□ -0.44
HDAC7-230ENST00000552960 KLHL5Q96PQ7 755 aa12.29□□□□□ -0.44
HDAC7-230ENST00000552960 NEURL2Q9BR09 285 aa12.29□□□□□ -0.44
HDAC7-230ENST00000552960 SLC39A8Q9C0K1 460 aa12.29□□□□□ -0.44
HDAC7-230ENST00000552960 LHPPQ9H008 270 aa12.29□□□□□ -0.44
HDAC7-230ENST00000552960 NT5MQ9NPB1 228 aa12.29□□□□□ -0.44
HDAC7-230ENST00000552960 FXYD1O00168 92 aa12.28□□□□□ -0.44
HDAC7-230ENST00000552960 MSI1O43347 362 aaKnown RBP12.28□□□□□ -0.44
HDAC7-230ENST00000552960 KDM1AO60341 852 aa12.28□□□□□ -0.44
HDAC7-230ENST00000552960 ALDH4A1P30038 563 aa12.28□□□□□ -0.44
HDAC7-230ENST00000552960 RFC2P35250 354 aa12.28□□□□□ -0.44
HDAC7-230ENST00000552960 GJA8P48165 433 aa12.28□□□□□ -0.44
HDAC7-230ENST00000552960 ARPP19P56211 112 aa12.28□□□□□ -0.44
HDAC7-230ENST00000552960 ACAP2Q15057 778 aa12.28□□□□□ -0.44
HDAC7-230ENST00000552960 MAPK11Q15759 364 aa12.28□□□□□ -0.44
HDAC7-230ENST00000552960 PLA2G4EQ3MJ16 856 aa12.28□□□□□ -0.44
HDAC7-230ENST00000552960 CCNYL2Q5T2Q4 361 aa12.28□□□□□ -0.44
HDAC7-230ENST00000552960 TFAP2DQ7Z6R9 452 aa12.28□□□□□ -0.44
HDAC7-230ENST00000552960 ITIH5Q86UX2 942 aa12.28□□□□□ -0.44
HDAC7-230ENST00000552960 CCDC97Q96F63 343 aaPredicted RBP12.28□□□□□ -0.44
HDAC7-230ENST00000552960 TSPAN17Q96FV3 270 aa12.28□□□□□ -0.44
HDAC7-230ENST00000552960 PCED1BQ96HM7 432 aa12.28□□□□□ -0.44
HDAC7-230ENST00000552960 FEM1CQ96JP0 617 aa12.28□□□□□ -0.44
HDAC7-230ENST00000552960 TEX37Q96LM6 180 aa12.28□□□□□ -0.44
HDAC7-230ENST00000552960 SMOQ99835 787 aa12.28□□□□□ -0.44
HDAC7-230ENST00000552960 SACM1LQ9NTJ5 587 aa12.28□□□□□ -0.44
HDAC7-230ENST00000552960 MRGBPQ9NV56 204 aa12.28□□□□□ -0.44
HDAC7-230ENST00000552960 TMLHEQ9NVH6 421 aa12.28□□□□□ -0.44
HDAC7-230ENST00000552960 CDH7Q9ULB5 785 aa12.28□□□□□ -0.44
HDAC7-230ENST00000552960 SZT2Q5T011 3432 aa12.28□□□□□ -0.44
HDAC7-230ENST00000552960 A0A1B0GTL3 188 aa12.28□□□□□ -0.44
HDAC7-230ENST00000552960 UBA6A0AVT1 1052 aaPredicted RBP12.28□□□□□ -0.44
HDAC7-230ENST00000552960 SUPT3HB4E1H0 165 aa12.28□□□□□ -0.44
HDAC7-230ENST00000552960 LSM1O15116 133 aaKnown RBP12.28□□□□□ -0.44
HDAC7-230ENST00000552960 PSMD3O43242 534 aa12.28□□□□□ -0.44
HDAC7-230ENST00000552960 E2F6O75461 281 aa12.28□□□□□ -0.44
HDAC7-230ENST00000552960 OR4Q2P0C623 313 aa12.28□□□□□ -0.44
HDAC7-230ENST00000552960 LBPP18428 481 aa12.28□□□□□ -0.44
HDAC7-230ENST00000552960 MLLT10P55197 1068 aa12.28□□□□□ -0.44
HDAC7-230ENST00000552960 BNIP2Q12982 314 aa12.28□□□□□ -0.44
HDAC7-230ENST00000552960 SPIDRQ14159 915 aa12.28□□□□□ -0.44
HDAC7-230ENST00000552960 CARTPTQ16568 116 aa12.28□□□□□ -0.44
HDAC7-230ENST00000552960 UPP1Q16831 310 aa12.28□□□□□ -0.44
HDAC7-230ENST00000552960 TCTN1Q2MV58 587 aa12.28□□□□□ -0.44
HDAC7-230ENST00000552960 PAGE3Q5JUK9 113 aa12.28□□□□□ -0.44
HDAC7-230ENST00000552960 MFSD4BQ5TF39 518 aa12.28□□□□□ -0.44
HDAC7-230ENST00000552960 LIMS2Q7Z4I7 341 aa12.28□□□□□ -0.44
HDAC7-230ENST00000552960 NANOGNBQ7Z5D8 188 aa12.28□□□□□ -0.44
HDAC7-230ENST00000552960 RAB44Q7Z6P3 723 aaPredicted RBP12.28□□□□□ -0.44
HDAC7-230ENST00000552960 ISCA2Q86U28 154 aa12.28□□□□□ -0.44
HDAC7-230ENST00000552960 IGFN1Q86VF2 1251 aa12.28□□□□□ -0.44
HDAC7-230ENST00000552960 SFRP1Q8N474 314 aa12.28□□□□□ -0.44
HDAC7-230ENST00000552960 NUDT8Q8WV74 236 aa12.28□□□□□ -0.44
HDAC7-230ENST00000552960 NTAN1Q96AB6 310 aa12.28□□□□□ -0.44
HDAC7-230ENST00000552960 B3GALT6Q96L58 329 aa12.28□□□□□ -0.44
HDAC7-230ENST00000552960 RTP3Q9BQQ7 232 aa12.28□□□□□ -0.44
HDAC7-230ENST00000552960 RAD21L1Q9H4I0 556 aa12.28□□□□□ -0.44
HDAC7-230ENST00000552960 FAM124BQ9H5Z6 455 aaPredicted RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms