RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 SDK2Q58EX2 2172 aa11.76□□□□□ -0.53
CKAP4-202ENST00000552828 A0A0J9YYE9 177 aa11.75□□□□□ -0.53
CKAP4-202ENST00000552828 GOLGA6CA6NDK9 693 aa11.75□□□□□ -0.53
CKAP4-202ENST00000552828 GOLGA6BA6NDN3 693 aa11.75□□□□□ -0.53
CKAP4-202ENST00000552828 EFCAB7A8K855 629 aa11.75□□□□□ -0.53
CKAP4-202ENST00000552828 RAD1O60671 282 aa11.75□□□□□ -0.53
CKAP4-202ENST00000552828 TRBC1P01850 177 aa11.75□□□□□ -0.53
CKAP4-202ENST00000552828 GOLGA6DP0CG33 693 aa11.75□□□□□ -0.53
CKAP4-202ENST00000552828 CTPS1P17812 591 aa11.75□□□□□ -0.53
CKAP4-202ENST00000552828 CES1P23141 567 aa11.75□□□□□ -0.53
CKAP4-202ENST00000552828 IL4RP24394 825 aa11.75□□□□□ -0.53
CKAP4-202ENST00000552828 MAP4P27816 1152 aaKnown RBP11.75□□□□□ -0.53
CKAP4-202ENST00000552828 SERPINB6P35237 376 aa11.75□□□□□ -0.53
CKAP4-202ENST00000552828 CCR10P46092 362 aa11.75□□□□□ -0.53
CKAP4-202ENST00000552828 ARSEP51690 589 aa11.75□□□□□ -0.53
CKAP4-202ENST00000552828 MC2RQ01718 297 aa11.75□□□□□ -0.53
CKAP4-202ENST00000552828 DPYSL3Q14195 570 aa11.75□□□□□ -0.53
CKAP4-202ENST00000552828 ODF2Q5BJF6 829 aa11.75□□□□□ -0.53
CKAP4-202ENST00000552828 LRRC66Q68CR7 880 aa11.75□□□□□ -0.53
CKAP4-202ENST00000552828 ANKS6Q68DC2 871 aa11.75□□□□□ -0.53
CKAP4-202ENST00000552828 C11orf63Q6NUN7 778 aa11.75□□□□□ -0.53
CKAP4-202ENST00000552828 DOK6Q6PKX4 331 aa11.75□□□□□ -0.53
CKAP4-202ENST00000552828 GALNT13Q8IUC8 556 aa11.75□□□□□ -0.53
CKAP4-202ENST00000552828 NDUFAF2Q8N183 169 aa11.75□□□□□ -0.53
CKAP4-202ENST00000552828 OR10G6Q8NH81 332 aa11.75□□□□□ -0.53
CKAP4-202ENST00000552828 EXD1Q8NHP7 514 aa11.75□□□□□ -0.53
CKAP4-202ENST00000552828 SLC37A2Q8TED4 501 aa11.75□□□□□ -0.53
CKAP4-202ENST00000552828 NSMCE1Q8WV22 266 aa11.75□□□□□ -0.53
CKAP4-202ENST00000552828 SCAMP4Q969E2 229 aa11.75□□□□□ -0.53
CKAP4-202ENST00000552828 RTP4Q96DX8 246 aa11.75□□□□□ -0.53
CKAP4-202ENST00000552828 SLC38A3Q99624 504 aa11.75□□□□□ -0.53
CKAP4-202ENST00000552828 ZNF670Q9BS34 389 aa11.75□□□□□ -0.53
CKAP4-202ENST00000552828 ZPBPQ9BS86 351 aa11.75□□□□□ -0.53
CKAP4-202ENST00000552828 LACRTQ9GZZ8 138 aa11.75□□□□□ -0.53
CKAP4-202ENST00000552828 SARS2Q9NP81 518 aaKnown RBP11.75□□□□□ -0.53
CKAP4-202ENST00000552828 FBXO8Q9NRD0 319 aa11.75□□□□□ -0.53
CKAP4-202ENST00000552828 GOLGA6AQ9NYA3 693 aa11.75□□□□□ -0.53
CKAP4-202ENST00000552828 VPS18Q9P253 973 aa11.75□□□□□ -0.53
CKAP4-202ENST00000552828 DUSP10Q9Y6W6 482 aa11.75□□□□□ -0.53
CKAP4-202ENST00000552828 A0A0U1RQS6 177 aa11.74□□□□□ -0.53
CKAP4-202ENST00000552828 LRRD1A4D1F6 860 aa11.74□□□□□ -0.53
CKAP4-202ENST00000552828 A6NCN8 305 aa11.74□□□□□ -0.53
CKAP4-202ENST00000552828 DUX1O43812 170 aa11.74□□□□□ -0.53
CKAP4-202ENST00000552828 DNAJC6O75061 913 aa11.74□□□□□ -0.53
CKAP4-202ENST00000552828 EML2O95834 649 aa11.74□□□□□ -0.53
CKAP4-202ENST00000552828 CD48P09326 243 aa11.74□□□□□ -0.53
CKAP4-202ENST00000552828 TNNT1P13805 278 aa11.74□□□□□ -0.53
CKAP4-202ENST00000552828 KDELR1P24390 212 aa11.74□□□□□ -0.53
CKAP4-202ENST00000552828 CASRP41180 1078 aa11.74□□□□□ -0.53
CKAP4-202ENST00000552828 STC1P52823 247 aa11.74□□□□□ -0.53
CKAP4-202ENST00000552828 MMRN1Q13201 1228 aa11.74□□□□□ -0.53
CKAP4-202ENST00000552828 IHHQ14623 411 aa11.74□□□□□ -0.53
CKAP4-202ENST00000552828 IFI16Q16666 785 aaKnown RBP11.74□□□□□ -0.53
CKAP4-202ENST00000552828 CRTC2Q53ET0 693 aaPredicted RBP11.74□□□□□ -0.53
CKAP4-202ENST00000552828 ANKRD20A8PQ5CZ79 823 aa11.74□□□□□ -0.53
CKAP4-202ENST00000552828 IYDQ6PHW0 289 aa11.74□□□□□ -0.53
CKAP4-202ENST00000552828 DAAM2Q86T65 1068 aa11.74□□□□□ -0.53
CKAP4-202ENST00000552828 TRIM74Q86UV6 250 aa11.74□□□□□ -0.53
CKAP4-202ENST00000552828 FAM129CQ86XR2 697 aa11.74□□□□□ -0.53
CKAP4-202ENST00000552828 NLGN4XQ8N0W4 816 aa11.74□□□□□ -0.53
CKAP4-202ENST00000552828 NLGN4YQ8NFZ3 816 aaPredicted RBP11.74□□□□□ -0.53
CKAP4-202ENST00000552828 RAPGEF5Q92565 580 aa11.74□□□□□ -0.53
CKAP4-202ENST00000552828 FATE1Q969F0 183 aa11.74□□□□□ -0.53
CKAP4-202ENST00000552828 SMIM14Q96QK8 99 aa11.74□□□□□ -0.53
CKAP4-202ENST00000552828 LYSMD1Q96S90 227 aa11.74□□□□□ -0.53
CKAP4-202ENST00000552828 AGAP2Q99490 1192 aa11.74□□□□□ -0.53
CKAP4-202ENST00000552828 EFHD1Q9BUP0 239 aa11.74□□□□□ -0.53
CKAP4-202ENST00000552828 EPN3Q9H201 632 aa11.74□□□□□ -0.53
CKAP4-202ENST00000552828 NT5MQ9NPB1 228 aa11.74□□□□□ -0.53
CKAP4-202ENST00000552828 DDX56Q9NY93 547 aaKnown RBP11.74□□□□□ -0.53
CKAP4-202ENST00000552828 CD84Q9UIB8 345 aa11.74□□□□□ -0.53
CKAP4-202ENST00000552828 ANAPC2Q9UJX6 822 aa11.74□□□□□ -0.53
CKAP4-202ENST00000552828 DNPEPQ9ULA0 475 aa11.74□□□□□ -0.53
CKAP4-202ENST00000552828 CNOT6Q9ULM6 557 aaKnown RBP11.74□□□□□ -0.53
CKAP4-202ENST00000552828 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.74□□□□□ -0.53
CKAP4-202ENST00000552828 HYOU1Q9Y4L1 999 aa11.74□□□□□ -0.53
CKAP4-202ENST00000552828 TMEM184BQ9Y519 407 aaPredicted RBP11.74□□□□□ -0.53
CKAP4-202ENST00000552828 PCYT1BQ9Y5K3 369 aaPredicted RBP11.74□□□□□ -0.53
CKAP4-202ENST00000552828 USP9YO00507 2555 aaPredicted RBP11.74□□□□□ -0.53
CKAP4-202ENST00000552828 CLEC18AA5D8T8 446 aa11.73□□□□□ -0.53
CKAP4-202ENST00000552828 NKX2-8O15522 239 aa11.73□□□□□ -0.53
CKAP4-202ENST00000552828 PSTPIP1O43586 416 aa11.73□□□□□ -0.53
CKAP4-202ENST00000552828 MAP3K6O95382 1288 aa11.73□□□□□ -0.53
CKAP4-202ENST00000552828 PRLP01236 227 aa11.73□□□□□ -0.53
CKAP4-202ENST00000552828 EPHA4P54764 986 aa11.73□□□□□ -0.53
CKAP4-202ENST00000552828 RPL26P61254 145 aaKnown RBP11.73□□□□□ -0.53
CKAP4-202ENST00000552828 FOXK1P85037 733 aa11.73□□□□□ -0.53
CKAP4-202ENST00000552828 HHEXQ03014 270 aa11.73□□□□□ -0.53
CKAP4-202ENST00000552828 ABHD18Q0P651 414 aa11.73□□□□□ -0.53
CKAP4-202ENST00000552828 CLEC18BQ6UXF7 455 aa11.73□□□□□ -0.53
CKAP4-202ENST00000552828 CEACAM20Q6UY09 585 aa11.73□□□□□ -0.53
CKAP4-202ENST00000552828 MARK2Q7KZI7 788 aaKnown RBP11.73□□□□□ -0.53
CKAP4-202ENST00000552828 TIPARPQ7Z3E1 657 aaKnown RBP11.73□□□□□ -0.53
CKAP4-202ENST00000552828 VSIG1Q86XK7 387 aa11.73□□□□□ -0.53
CKAP4-202ENST00000552828 ZNF761Q86XN6 746 aaPredicted RBP11.73□□□□□ -0.53
CKAP4-202ENST00000552828 PTRH1Q86Y79 214 aaKnown RBP11.73□□□□□ -0.53
CKAP4-202ENST00000552828 CLEC18CQ8NCF0 446 aa11.73□□□□□ -0.53
CKAP4-202ENST00000552828 MAML1Q92585 1016 aa11.73□□□□□ -0.53
CKAP4-202ENST00000552828 SH3KBP1Q96B97 665 aa11.73□□□□□ -0.53
CKAP4-202ENST00000552828 AHCYL2Q96HN2 611 aaKnown RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms