RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 ST14Q9Y5Y6 855 aa5.35□□□□□ -1.55
HOXB3-213ENST00000552000 NSD1Q96L73 2696 aaPredicted RBP5.35□□□□□ -1.55
HOXB3-213ENST00000552000 GTF3C1Q12789 2109 aa5.35□□□□□ -1.55
HOXB3-213ENST00000552000 DNAJC13O75165 2243 aa5.34□□□□□ -1.55
HOXB3-213ENST00000552000 CXorf51AA0A1B0GTR3 108 aa5.34□□□□□ -1.55
HOXB3-213ENST00000552000 TSPAN11A1L157 253 aa5.34□□□□□ -1.55
HOXB3-213ENST00000552000 ANKRD62A6NC57 917 aa5.34□□□□□ -1.55
HOXB3-213ENST00000552000 ZSCAN5CA6NGD5 496 aaPredicted RBP5.34□□□□□ -1.55
HOXB3-213ENST00000552000 A8MX80 341 aa5.34□□□□□ -1.55
HOXB3-213ENST00000552000 P4HA2O15460 535 aa5.34□□□□□ -1.55
HOXB3-213ENST00000552000 KDELR3O43731 214 aa5.34□□□□□ -1.55
HOXB3-213ENST00000552000 KRT86O43790 486 aa5.34□□□□□ -1.55
HOXB3-213ENST00000552000 RAMP2O60895 175 aa5.34□□□□□ -1.55
HOXB3-213ENST00000552000 CREG1O75629 220 aa5.34□□□□□ -1.55
HOXB3-213ENST00000552000 KIAA0754O94854 1291 aa5.34□□□□□ -1.55
HOXB3-213ENST00000552000 F9P00740 461 aa5.34□□□□□ -1.55
HOXB3-213ENST00000552000 CEACAM5P06731 702 aa5.34□□□□□ -1.55
HOXB3-213ENST00000552000 ELFN1P0C7U0 828 aa5.34□□□□□ -1.55
HOXB3-213ENST00000552000 MYCLP1P12525 358 aaPredicted RBP5.34□□□□□ -1.55
HOXB3-213ENST00000552000 CASP14P31944 242 aa5.34□□□□□ -1.55
HOXB3-213ENST00000552000 TRIM23P36406 574 aa5.34□□□□□ -1.55
HOXB3-213ENST00000552000 ACTR1BP42025 376 aa5.34□□□□□ -1.55
HOXB3-213ENST00000552000 MAPK9P45984 424 aa5.34□□□□□ -1.55
HOXB3-213ENST00000552000 LEPRP48357 1165 aaKnown RBP5.34□□□□□ -1.55
HOXB3-213ENST00000552000 POLD2P49005 469 aa5.34□□□□□ -1.55
HOXB3-213ENST00000552000 MAPKAPK2P49137 400 aa5.34□□□□□ -1.55
HOXB3-213ENST00000552000 CCL11P51671 97 aa5.34□□□□□ -1.55
HOXB3-213ENST00000552000 NDUFA8P51970 172 aa5.34□□□□□ -1.55
HOXB3-213ENST00000552000 SNX16P57768 344 aa5.34□□□□□ -1.55
HOXB3-213ENST00000552000 ACTR1AP61163 376 aa5.34□□□□□ -1.55
HOXB3-213ENST00000552000 TAGLNQ01995 201 aaKnown RBP5.34□□□□□ -1.55
HOXB3-213ENST00000552000 FOXM1Q08050 763 aa5.34□□□□□ -1.55
HOXB3-213ENST00000552000 RALGDSQ12967 914 aa5.34□□□□□ -1.55
HOXB3-213ENST00000552000 SEMA5AQ13591 1074 aa5.34□□□□□ -1.55
HOXB3-213ENST00000552000 DNASE1L3Q13609 305 aa5.34□□□□□ -1.55
HOXB3-213ENST00000552000 MAP7Q14244 749 aa5.34□□□□□ -1.55
HOXB3-213ENST00000552000 ACOX1Q15067 660 aa5.34□□□□□ -1.55
HOXB3-213ENST00000552000 KRTAP21-3Q3LHN1 58 aa5.34□□□□□ -1.55
HOXB3-213ENST00000552000 SLC25A52Q3SY17 297 aa5.34□□□□□ -1.55
HOXB3-213ENST00000552000 CCDC40Q4G0X9 1142 aa5.34□□□□□ -1.55
HOXB3-213ENST00000552000 ACBD5Q5T8D3 534 aaPredicted RBP5.34□□□□□ -1.55
HOXB3-213ENST00000552000 JMJD6Q6NYC1 403 aaPredicted RBP5.34□□□□□ -1.55
HOXB3-213ENST00000552000 PNCKQ6P2M8 343 aa5.34□□□□□ -1.55
HOXB3-213ENST00000552000 GJB7Q6PEY0 223 aa5.34□□□□□ -1.55
HOXB3-213ENST00000552000 DOK6Q6PKX4 331 aa5.34□□□□□ -1.55
HOXB3-213ENST00000552000 LIPIQ6XZB0 460 aa5.34□□□□□ -1.55
HOXB3-213ENST00000552000 KRBA2Q6ZNG9 492 aa5.34□□□□□ -1.55
HOXB3-213ENST00000552000 SLC47A2Q86VL8 602 aa5.34□□□□□ -1.55
HOXB3-213ENST00000552000 NLRP14Q86W24 1093 aa5.34□□□□□ -1.55
HOXB3-213ENST00000552000 CAMK1DQ8IU85 385 aa5.34□□□□□ -1.55
HOXB3-213ENST00000552000 APLFQ8IW19 511 aaPredicted RBP5.34□□□□□ -1.55
HOXB3-213ENST00000552000 PAF1Q8N7H5 531 aa5.34□□□□□ -1.55
HOXB3-213ENST00000552000 Q8NA96 180 aa5.34□□□□□ -1.55
HOXB3-213ENST00000552000 NT5C3BQ969T7 300 aa5.34□□□□□ -1.55
HOXB3-213ENST00000552000 C19orf60Q96EN9 201 aa5.34□□□□□ -1.55
HOXB3-213ENST00000552000 STAMBPL1Q96FJ0 436 aa5.34□□□□□ -1.55
HOXB3-213ENST00000552000 PGAP3Q96FM1 320 aaPredicted RBP5.34□□□□□ -1.55
HOXB3-213ENST00000552000 FAM46AQ96IP4 442 aaKnown RBP5.34□□□□□ -1.55
HOXB3-213ENST00000552000 ELMO2Q96JJ3 720 aa5.34□□□□□ -1.55
HOXB3-213ENST00000552000 SLC38A3Q99624 504 aa5.34□□□□□ -1.55
HOXB3-213ENST00000552000 MAGEB5Q9BZ81 275 aa5.34□□□□□ -1.55
HOXB3-213ENST00000552000 MAGEH1Q9H213 219 aa5.34□□□□□ -1.55
HOXB3-213ENST00000552000 PHPT1Q9NRX4 125 aaPredicted RBP5.34□□□□□ -1.55
HOXB3-213ENST00000552000 TMEM248Q9NWD8 314 aa5.34□□□□□ -1.55
HOXB3-213ENST00000552000 TRNAU1APQ9NX07 287 aaKnown RBP5.34□□□□□ -1.55
HOXB3-213ENST00000552000 PPARGC1AQ9UBK2 798 aaKnown RBP5.34□□□□□ -1.55
HOXB3-213ENST00000552000 LHX3Q9UBR4 397 aa5.34□□□□□ -1.55
HOXB3-213ENST00000552000 LNPEPQ9UIQ6 1025 aa5.34□□□□□ -1.55
HOXB3-213ENST00000552000 ITGB1BP2Q9UKP3 347 aa5.34□□□□□ -1.55
HOXB3-213ENST00000552000 SUFUQ9UMX1 484 aa5.34□□□□□ -1.55
HOXB3-213ENST00000552000 TRIM33Q9UPN9 1127 aa5.34□□□□□ -1.55
HOXB3-213ENST00000552000 ENTPD4Q9Y227 616 aa5.34□□□□□ -1.55
HOXB3-213ENST00000552000 GOLGA6CA6NDK9 693 aa5.33□□□□□ -1.56
HOXB3-213ENST00000552000 GOLGA6BA6NDN3 693 aa5.33□□□□□ -1.56
HOXB3-213ENST00000552000 ANKUB1A6NFN9 424 aa5.33□□□□□ -1.56
HOXB3-213ENST00000552000 ARGFXA6NJG6 315 aa5.33□□□□□ -1.56
HOXB3-213ENST00000552000 BECN2A8MW95 431 aa5.33□□□□□ -1.56
HOXB3-213ENST00000552000 FAM72CH0Y354 149 aa5.33□□□□□ -1.56
HOXB3-213ENST00000552000 GOLGA8SH3BPF8 625 aa5.33□□□□□ -1.56
HOXB3-213ENST00000552000 BUB1BO60566 1050 aaPredicted RBP5.33□□□□□ -1.56
HOXB3-213ENST00000552000 LRCH4O75427 683 aa5.33□□□□□ -1.56
HOXB3-213ENST00000552000 CBX6O95503 412 aa5.33□□□□□ -1.56
HOXB3-213ENST00000552000 F13A1P00488 732 aa5.33□□□□□ -1.56
HOXB3-213ENST00000552000 GOLGA6DP0CG33 693 aa5.33□□□□□ -1.56
HOXB3-213ENST00000552000 ZSCAN22P10073 491 aaPredicted RBP5.33□□□□□ -1.56
HOXB3-213ENST00000552000 JUNBP17275 347 aaPredicted RBP5.33□□□□□ -1.56
HOXB3-213ENST00000552000 GM2AP17900 193 aa5.33□□□□□ -1.56
HOXB3-213ENST00000552000 NFKBIAP25963 317 aa5.33□□□□□ -1.56
HOXB3-213ENST00000552000 ERCC5P28715 1186 aaPredicted RBP5.33□□□□□ -1.56
HOXB3-213ENST00000552000 FLT3P36888 993 aa5.33□□□□□ -1.56
HOXB3-213ENST00000552000 ADCY8P40145 1251 aa5.33□□□□□ -1.56
HOXB3-213ENST00000552000 SEPHS1P49903 392 aa5.33□□□□□ -1.56
HOXB3-213ENST00000552000 ATP11AP98196 1134 aa5.33□□□□□ -1.56
HOXB3-213ENST00000552000 NFATC2Q13469 925 aa5.33□□□□□ -1.56
HOXB3-213ENST00000552000 PEX6Q13608 980 aa5.33□□□□□ -1.56
HOXB3-213ENST00000552000 CYTH1Q15438 398 aa5.33□□□□□ -1.56
HOXB3-213ENST00000552000 RAB6CQ53S08 254 aa5.33□□□□□ -1.56
HOXB3-213ENST00000552000 INO80DQ53TQ3 878 aaPredicted RBP5.33□□□□□ -1.56
HOXB3-213ENST00000552000 ZRANB3Q5FWF4 1079 aa5.33□□□□□ -1.56
HOXB3-213ENST00000552000 FAM102AQ5T9C2 384 aaPredicted RBP5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms