RNA–Protein interactions for RNA: ENST00000551544.5

CACNB3-219, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 2,825 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-219ENST00000551544 DCBLD1Q8N8Z6 715 aa12.96□□□□□ -0.34
CACNB3-219ENST00000551544 TEX37Q96LM6 180 aa12.96□□□□□ -0.34
CACNB3-219ENST00000551544 POPDC3Q9HBV1 291 aa12.96□□□□□ -0.34
CACNB3-219ENST00000551544 OLA1Q9NTK5 396 aaKnown RBP12.96□□□□□ -0.34
CACNB3-219ENST00000551544 MED16Q9Y2X0 877 aa12.96□□□□□ -0.34
CACNB3-219ENST00000551544 MANSC4A6NHS7 340 aaPredicted RBP12.95□□□□□ -0.34
CACNB3-219ENST00000551544 F5H5T6 163 aa12.95□□□□□ -0.34
CACNB3-219ENST00000551544 ARPC2O15144 300 aa12.95□□□□□ -0.34
CACNB3-219ENST00000551544 ADAMTS4O75173 837 aa12.95□□□□□ -0.34
CACNB3-219ENST00000551544 SEC24DO94855 1032 aaPredicted RBP12.95□□□□□ -0.34
CACNB3-219ENST00000551544 MAGEA8P43361 318 aa12.95□□□□□ -0.34
CACNB3-219ENST00000551544 RGRP47804 291 aa12.95□□□□□ -0.34
CACNB3-219ENST00000551544 MAPKAPK2P49137 400 aa12.95□□□□□ -0.34
CACNB3-219ENST00000551544 PTPRNQ16849 979 aa12.95□□□□□ -0.34
CACNB3-219ENST00000551544 TYSND1Q2T9J0 566 aa12.95□□□□□ -0.34
CACNB3-219ENST00000551544 ACBD5Q5T8D3 534 aaPredicted RBP12.95□□□□□ -0.34
CACNB3-219ENST00000551544 BLOC1S3Q6QNY0 202 aa12.95□□□□□ -0.34
CACNB3-219ENST00000551544 IFNL1Q8IU54 200 aa12.95□□□□□ -0.34
CACNB3-219ENST00000551544 FIBCD1Q8N539 461 aa12.95□□□□□ -0.34
CACNB3-219ENST00000551544 GIPC2Q8TF65 315 aa12.95□□□□□ -0.34
CACNB3-219ENST00000551544 PEX13Q92968 403 aa12.95□□□□□ -0.34
CACNB3-219ENST00000551544 NSMCE3Q96MG7 304 aa12.95□□□□□ -0.34
CACNB3-219ENST00000551544 ACOX2Q99424 681 aa12.95□□□□□ -0.34
CACNB3-219ENST00000551544 C1orf50Q9BV19 199 aa12.95□□□□□ -0.34
CACNB3-219ENST00000551544 ANKRD60Q9BZ19 345 aa12.95□□□□□ -0.34
CACNB3-219ENST00000551544 CRISPLD1Q9H336 500 aa12.95□□□□□ -0.34
CACNB3-219ENST00000551544 AQP12BA6NM10 295 aa12.95□□□□□ -0.34
CACNB3-219ENST00000551544 INPP4BO15327 924 aa12.95□□□□□ -0.34
CACNB3-219ENST00000551544 SEPT4O43236 478 aa12.95□□□□□ -0.34
CACNB3-219ENST00000551544 TLR5O60602 858 aa12.95□□□□□ -0.34
CACNB3-219ENST00000551544 COQ9O75208 318 aa12.95□□□□□ -0.34
CACNB3-219ENST00000551544 MATN4O95460 622 aa12.95□□□□□ -0.34
CACNB3-219ENST00000551544 HSD17B1P14061 328 aa12.95□□□□□ -0.34
CACNB3-219ENST00000551544 NCK1P16333 377 aa12.95□□□□□ -0.34
CACNB3-219ENST00000551544 FASP25445 335 aa12.95□□□□□ -0.34
CACNB3-219ENST00000551544 KCNK10P57789 538 aa12.95□□□□□ -0.34
CACNB3-219ENST00000551544 CRHR2Q13324 411 aa12.95□□□□□ -0.34
CACNB3-219ENST00000551544 RBBP7Q16576 425 aa12.95□□□□□ -0.34
CACNB3-219ENST00000551544 CYP51A1Q16850 503 aa12.95□□□□□ -0.34
CACNB3-219ENST00000551544 UGT3A1Q6NUS8 523 aa12.95□□□□□ -0.34
CACNB3-219ENST00000551544 EPHX4Q8IUS5 362 aa12.95□□□□□ -0.34
CACNB3-219ENST00000551544 AQP12AQ8IXF9 295 aa12.95□□□□□ -0.34
CACNB3-219ENST00000551544 ZNF786Q8N393 782 aa12.95□□□□□ -0.34
CACNB3-219ENST00000551544 TFAP2CQ92754 450 aa12.95□□□□□ -0.34
CACNB3-219ENST00000551544 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.95□□□□□ -0.34
CACNB3-219ENST00000551544 CYP2S1Q96SQ9 504 aa12.95□□□□□ -0.34
CACNB3-219ENST00000551544 SLC30A3Q99726 388 aa12.95□□□□□ -0.34
CACNB3-219ENST00000551544 CINPQ9BW66 212 aaPredicted RBP12.95□□□□□ -0.34
CACNB3-219ENST00000551544 DERL2Q9GZP9 239 aa12.95□□□□□ -0.34
CACNB3-219ENST00000551544 PIF1Q9H611 641 aa12.95□□□□□ -0.34
CACNB3-219ENST00000551544 LIN28AQ9H9Z2 209 aaKnown RBP12.95□□□□□ -0.34
CACNB3-219ENST00000551544 PDFQ9HBH1 243 aa12.95□□□□□ -0.34
CACNB3-219ENST00000551544 INTS10Q9NVR2 710 aaKnown RBP12.95□□□□□ -0.34
CACNB3-219ENST00000551544 SMOXQ9NWM0 555 aa12.95□□□□□ -0.34
CACNB3-219ENST00000551544 GPR45Q9Y5Y3 372 aa12.95□□□□□ -0.34
CACNB3-219ENST00000551544 LCHNA4D1U4 455 aa12.94□□□□□ -0.34
CACNB3-219ENST00000551544 CYBBP04839 570 aa12.94□□□□□ -0.34
CACNB3-219ENST00000551544 ARL1P40616 181 aaPredicted RBP12.94□□□□□ -0.34
CACNB3-219ENST00000551544 BNIP2Q12982 314 aa12.94□□□□□ -0.34
CACNB3-219ENST00000551544 HABP4Q5JVS0 413 aaKnown RBP12.94□□□□□ -0.34
CACNB3-219ENST00000551544 C1QTNF12Q5T7M4 302 aa12.94□□□□□ -0.34
CACNB3-219ENST00000551544 SYVN1Q86TM6 617 aa12.94□□□□□ -0.34
CACNB3-219ENST00000551544 CAMK1DQ8IU85 385 aa12.94□□□□□ -0.34
CACNB3-219ENST00000551544 CMTR2Q8IYT2 770 aaKnown RBP12.94□□□□□ -0.34
CACNB3-219ENST00000551544 BBS5Q8N3I7 341 aa12.94□□□□□ -0.34
CACNB3-219ENST00000551544 MDGA1Q8NFP4 955 aa12.94□□□□□ -0.34
CACNB3-219ENST00000551544 FUBP1Q96AE4 644 aaKnown RBP12.94□□□□□ -0.34
CACNB3-219ENST00000551544 TRIB3Q96RU7 358 aa12.94□□□□□ -0.34
CACNB3-219ENST00000551544 ZBED2Q9BTP6 218 aa12.94□□□□□ -0.34
CACNB3-219ENST00000551544 CLK4Q9HAZ1 481 aaKnown RBP12.94□□□□□ -0.34
CACNB3-219ENST00000551544 ZFYVE28Q9HCC9 887 aa12.94□□□□□ -0.34
CACNB3-219ENST00000551544 AGPAT4Q9NRZ5 378 aa12.94□□□□□ -0.34
CACNB3-219ENST00000551544 NLE1Q9NVX2 485 aaPredicted RBP12.94□□□□□ -0.34
CACNB3-219ENST00000551544 RHBDL2Q9NX52 303 aa12.94□□□□□ -0.34
CACNB3-219ENST00000551544 IL37Q9NZH6 218 aa12.94□□□□□ -0.34
CACNB3-219ENST00000551544 ACTR3BQ9P1U1 418 aa12.94□□□□□ -0.34
CACNB3-219ENST00000551544 RSL24D1Q9UHA3 163 aaKnown RBP12.94□□□□□ -0.34
CACNB3-219ENST00000551544 TSR3Q9UJK0 312 aaKnown RBP12.94□□□□□ -0.34
CACNB3-219ENST00000551544 V9GYQ6 96 aa12.94□□□□□ -0.34
CACNB3-219ENST00000551544 OR1I1O60431 355 aa12.94□□□□□ -0.34
CACNB3-219ENST00000551544 IGLV3-27P01718 113 aa12.94□□□□□ -0.34
CACNB3-219ENST00000551544 HOXD9P28356 352 aaPredicted RBP12.94□□□□□ -0.34
CACNB3-219ENST00000551544 SLC6A4P31645 630 aa12.94□□□□□ -0.34
CACNB3-219ENST00000551544 MAGEA11P43364 429 aa12.94□□□□□ -0.34
CACNB3-219ENST00000551544 ZNF140P52738 457 aaPredicted RBP12.94□□□□□ -0.34
CACNB3-219ENST00000551544 UFM1P61960 85 aa12.94□□□□□ -0.34
CACNB3-219ENST00000551544 GNA12Q03113 381 aa12.94□□□□□ -0.34
CACNB3-219ENST00000551544 PAGE3Q5JUK9 113 aa12.94□□□□□ -0.34
CACNB3-219ENST00000551544 LCN8Q6JVE9 175 aa12.94□□□□□ -0.34
CACNB3-219ENST00000551544 SLC24A5Q71RS6 500 aa12.94□□□□□ -0.34
CACNB3-219ENST00000551544 LPCAT2Q7L5N7 544 aa12.94□□□□□ -0.34
CACNB3-219ENST00000551544 ERI1Q8IV48 349 aaKnown RBP12.94□□□□□ -0.34
CACNB3-219ENST00000551544 SIDT2Q8NBJ9 832 aaKnown RBP12.94□□□□□ -0.34
CACNB3-219ENST00000551544 TTC16Q8NEE8 873 aa12.94□□□□□ -0.34
CACNB3-219ENST00000551544 HGH1Q9BTY7 390 aa12.94□□□□□ -0.34
CACNB3-219ENST00000551544 RRAGCQ9HB90 399 aa12.94□□□□□ -0.34
CACNB3-219ENST00000551544 BPIFA1Q9NP55 256 aa12.94□□□□□ -0.34
CACNB3-219ENST00000551544 SARS2Q9NP81 518 aaKnown RBP12.94□□□□□ -0.34
CACNB3-219ENST00000551544 SLAMF8Q9P0V8 285 aa12.94□□□□□ -0.34
CACNB3-219ENST00000551544 OAZ3Q9UMX2 235 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms