RNA–Protein interactions for RNA: ENST00000550914.6

PTCH1-221, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-221ENST00000550914 LILRA5A6NI73 299 aa12.72□□□□□ -0.37
PTCH1-221ENST00000550914 CYSRT1A8MQ03 144 aa12.72□□□□□ -0.37
PTCH1-221ENST00000550914 GPR89AB7ZAQ6 455 aa12.72□□□□□ -0.37
PTCH1-221ENST00000550914 NUAK1O60285 661 aa12.72□□□□□ -0.37
PTCH1-221ENST00000550914 ATP1A1P05023 1023 aaKnown RBP12.72□□□□□ -0.37
PTCH1-221ENST00000550914 CD48P09326 243 aa12.72□□□□□ -0.37
PTCH1-221ENST00000550914 ANKRD34CP0C6C1 535 aa12.72□□□□□ -0.37
PTCH1-221ENST00000550914 GPR89BP0CG08 455 aa12.72□□□□□ -0.37
PTCH1-221ENST00000550914 PPM1FP49593 454 aaPredicted RBP12.72□□□□□ -0.37
PTCH1-221ENST00000550914 MAP7Q14244 749 aa12.72□□□□□ -0.37
PTCH1-221ENST00000550914 PDK2Q15119 407 aa12.72□□□□□ -0.37
PTCH1-221ENST00000550914 ANKRD20A8PQ5CZ79 823 aa12.72□□□□□ -0.37
PTCH1-221ENST00000550914 CHST15Q7LFX5 561 aaPredicted RBP12.72□□□□□ -0.37
PTCH1-221ENST00000550914 PLXDC1Q8IUK5 500 aa12.72□□□□□ -0.37
PTCH1-221ENST00000550914 MAP7D3Q8IWC1 876 aa12.72□□□□□ -0.37
PTCH1-221ENST00000550914 CCHCR1Q8TD31 782 aa12.72□□□□□ -0.37
PTCH1-221ENST00000550914 NCSTNQ92542 709 aa12.72□□□□□ -0.37
PTCH1-221ENST00000550914 IQCDQ96DY2 449 aa12.72□□□□□ -0.37
PTCH1-221ENST00000550914 BTBD6Q96KE9 485 aa12.72□□□□□ -0.37
PTCH1-221ENST00000550914 CARD9Q9H257 536 aa12.72□□□□□ -0.37
PTCH1-221ENST00000550914 PKD2L2Q9NZM6 624 aa12.72□□□□□ -0.37
PTCH1-221ENST00000550914 ANAPC2Q9UJX6 822 aa12.72□□□□□ -0.37
PTCH1-221ENST00000550914 PCYT1BQ9Y5K3 369 aaPredicted RBP12.72□□□□□ -0.37
PTCH1-221ENST00000550914 A8MU76 341 aa12.71□□□□□ -0.37
PTCH1-221ENST00000550914 FADS2P1A8MWK0 482 aa12.71□□□□□ -0.37
PTCH1-221ENST00000550914 ANKRD66B4E2M5 251 aa12.71□□□□□ -0.37
PTCH1-221ENST00000550914 GRID2O43424 1007 aa12.71□□□□□ -0.37
PTCH1-221ENST00000550914 STK17BO94768 372 aa12.71□□□□□ -0.37
PTCH1-221ENST00000550914 SERPING1P05155 500 aa12.71□□□□□ -0.37
PTCH1-221ENST00000550914 HLA-DQB2P05538 268 aa12.71□□□□□ -0.37
PTCH1-221ENST00000550914 ACP5P13686 325 aa12.71□□□□□ -0.37
PTCH1-221ENST00000550914 ANP32AP39687 249 aaKnown RBP12.71□□□□□ -0.37
PTCH1-221ENST00000550914 CASRP41180 1078 aa12.71□□□□□ -0.37
PTCH1-221ENST00000550914 NOP2P46087 812 aaKnown RBP12.71□□□□□ -0.37
PTCH1-221ENST00000550914 NIPAL4Q0D2K0 466 aa12.71□□□□□ -0.37
PTCH1-221ENST00000550914 CDC20Q12834 499 aa12.71□□□□□ -0.37
PTCH1-221ENST00000550914 NFATC2Q13469 925 aa12.71□□□□□ -0.37
PTCH1-221ENST00000550914 SNAP47Q5SQN1 464 aa12.71□□□□□ -0.37
PTCH1-221ENST00000550914 PDPK2PQ6A1A2 396 aa12.71□□□□□ -0.37
PTCH1-221ENST00000550914 TIPARPQ7Z3E1 657 aaKnown RBP12.71□□□□□ -0.37
PTCH1-221ENST00000550914 PHYKPLQ8IUZ5 450 aa12.71□□□□□ -0.37
PTCH1-221ENST00000550914 KCTD6Q8NC69 237 aa12.71□□□□□ -0.37
PTCH1-221ENST00000550914 LPCAT1Q8NF37 534 aa12.71□□□□□ -0.37
PTCH1-221ENST00000550914 FAF2Q96CS3 445 aa12.71□□□□□ -0.37
PTCH1-221ENST00000550914 HDAC11Q96DB2 347 aa12.71□□□□□ -0.37
PTCH1-221ENST00000550914 MLPHQ9BV36 600 aaPredicted RBP12.71□□□□□ -0.37
PTCH1-221ENST00000550914 ADGRE3Q9BY15 652 aa12.71□□□□□ -0.37
PTCH1-221ENST00000550914 NFKBIL1Q9UBC1 381 aaPredicted RBP12.71□□□□□ -0.37
PTCH1-221ENST00000550914 CPNE7Q9UBL6 633 aa12.71□□□□□ -0.37
PTCH1-221ENST00000550914 LCMT1Q9UIC8 334 aa12.71□□□□□ -0.37
PTCH1-221ENST00000550914 KCNK6Q9Y257 313 aa12.71□□□□□ -0.37
PTCH1-221ENST00000550914 TTLL3Q9Y4R7 772 aa12.71□□□□□ -0.37
PTCH1-221ENST00000550914 LOC101059948A0A1B0GTJ6 334 aa12.7□□□□□ -0.38
PTCH1-221ENST00000550914 POLR1CO15160 346 aaPredicted RBP12.7□□□□□ -0.38
PTCH1-221ENST00000550914 TOX3O15405 576 aaPredicted RBP12.7□□□□□ -0.38
PTCH1-221ENST00000550914 NKX2-8O15522 239 aa12.7□□□□□ -0.38
PTCH1-221ENST00000550914 DLGAP3O95886 979 aa12.7□□□□□ -0.38
PTCH1-221ENST00000550914 SERPINC1P01008 464 aa12.7□□□□□ -0.38
PTCH1-221ENST00000550914 C9P02748 559 aa12.7□□□□□ -0.38
PTCH1-221ENST00000550914 MMP2P08253 660 aa12.7□□□□□ -0.38
PTCH1-221ENST00000550914 KRT7P08729 469 aa12.7□□□□□ -0.38
PTCH1-221ENST00000550914 XRCC1P18887 633 aaPredicted RBP12.7□□□□□ -0.38
PTCH1-221ENST00000550914 STAT5AP42229 794 aa12.7□□□□□ -0.38
PTCH1-221ENST00000550914 SSR1P43307 286 aaKnown RBP12.7□□□□□ -0.38
PTCH1-221ENST00000550914 DCDC1P59894 354 aa12.7□□□□□ -0.38
PTCH1-221ENST00000550914 UBE2IP63279 158 aaKnown RBP12.7□□□□□ -0.38
PTCH1-221ENST00000550914 ZBED6P86452 979 aa12.7□□□□□ -0.38
PTCH1-221ENST00000550914 SRSF1Q07955 248 aaKnown RBP eCLIP12.7□□□□□ -0.38
PTCH1-221ENST00000550914 QPCTQ16769 361 aa12.7□□□□□ -0.38
PTCH1-221ENST00000550914 COLEC12Q5KU26 742 aa12.7□□□□□ -0.38
PTCH1-221ENST00000550914 ALKBH5Q6P6C2 394 aaKnown RBP12.7□□□□□ -0.38
PTCH1-221ENST00000550914 PTRH1Q86Y79 214 aaKnown RBP12.7□□□□□ -0.38
PTCH1-221ENST00000550914 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.7□□□□□ -0.38
PTCH1-221ENST00000550914 ESX1Q8N693 406 aa12.7□□□□□ -0.38
PTCH1-221ENST00000550914 C9orf43Q8TAL5 461 aaPredicted RBP12.7□□□□□ -0.38
PTCH1-221ENST00000550914 APOBEC4Q8WW27 367 aaKnown RBP12.7□□□□□ -0.38
PTCH1-221ENST00000550914 CTRCQ99895 268 aa12.7□□□□□ -0.38
PTCH1-221ENST00000550914 ZSCAN5AQ9BUG6 496 aa12.7□□□□□ -0.38
PTCH1-221ENST00000550914 EPN3Q9H201 632 aa12.7□□□□□ -0.38
PTCH1-221ENST00000550914 RAD18Q9NS91 495 aa12.7□□□□□ -0.38
PTCH1-221ENST00000550914 SIDT1Q9NXL6 827 aaKnown RBP12.7□□□□□ -0.38
PTCH1-221ENST00000550914 TMEM63CQ9P1W3 806 aa12.7□□□□□ -0.38
PTCH1-221ENST00000550914 PRKAB1Q9Y478 270 aa12.7□□□□□ -0.38
PTCH1-221ENST00000550914 ADGRG1Q9Y653 693 aa12.7□□□□□ -0.38
PTCH1-221ENST00000550914 SPENQ96T58 3664 aaKnown RBP12.69□□□□□ -0.38
PTCH1-221ENST00000550914 A0A087X0T9 212 aa12.69□□□□□ -0.38
PTCH1-221ENST00000550914 SNX2O60749 519 aa12.69□□□□□ -0.38
PTCH1-221ENST00000550914 FAM228BP0C875 321 aa12.69□□□□□ -0.38
PTCH1-221ENST00000550914 PBX1P40424 430 aa12.69□□□□□ -0.38
PTCH1-221ENST00000550914 CD86P42081 329 aa12.69□□□□□ -0.38
PTCH1-221ENST00000550914 IFI35P80217 286 aaPredicted RBP12.69□□□□□ -0.38
PTCH1-221ENST00000550914 IQCB1Q15051 598 aa12.69□□□□□ -0.38
PTCH1-221ENST00000550914 ATP13A4Q4VNC1 1196 aa12.69□□□□□ -0.38
PTCH1-221ENST00000550914 ZNF569Q5MCW4 686 aa12.69□□□□□ -0.38
PTCH1-221ENST00000550914 KDELC2Q7Z4H8 507 aa12.69□□□□□ -0.38
PTCH1-221ENST00000550914 CCDC13Q8IYE1 715 aa12.69□□□□□ -0.38
PTCH1-221ENST00000550914 PQLC3Q8N755 202 aa12.69□□□□□ -0.38
PTCH1-221ENST00000550914 STARD8Q92502 1023 aa12.69□□□□□ -0.38
PTCH1-221ENST00000550914 C9orf72Q96LT7 481 aa12.69□□□□□ -0.38
PTCH1-221ENST00000550914 ZNF830Q96NB3 372 aaPredicted RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms