RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.84□□□□□ -1.47
SCAF11-213ENST00000550629 WFIKKN2Q8TEU8 576 aa5.84□□□□□ -1.47
SCAF11-213ENST00000550629 MAIP1Q8WWC4 291 aa5.84□□□□□ -1.47
SCAF11-213ENST00000550629 EXTL1Q92935 676 aa5.84□□□□□ -1.47
SCAF11-213ENST00000550629 MYEOVQ96EZ4 313 aa5.84□□□□□ -1.47
SCAF11-213ENST00000550629 ZFYVE19Q96K21 471 aa5.84□□□□□ -1.47
SCAF11-213ENST00000550629 LMLNQ96KR4 655 aa5.84□□□□□ -1.47
SCAF11-213ENST00000550629 C16orf45Q96MC5 204 aaPredicted RBP5.84□□□□□ -1.47
SCAF11-213ENST00000550629 OSBPL9Q96SU4 736 aa5.84□□□□□ -1.47
SCAF11-213ENST00000550629 GPHA2Q96T91 129 aa5.84□□□□□ -1.47
SCAF11-213ENST00000550629 FEM1AQ9BSK4 669 aa5.84□□□□□ -1.47
SCAF11-213ENST00000550629 OSBPL8Q9BZF1 889 aa5.84□□□□□ -1.47
SCAF11-213ENST00000550629 LRRC19Q9H756 370 aa5.84□□□□□ -1.47
SCAF11-213ENST00000550629 HOMER3Q9NSC5 361 aa5.84□□□□□ -1.47
SCAF11-213ENST00000550629 KLHL11Q9NVR0 708 aa5.84□□□□□ -1.47
SCAF11-213ENST00000550629 GTSE1Q9NYZ3 720 aa5.84□□□□□ -1.47
SCAF11-213ENST00000550629 MPP6Q9NZW5 540 aa5.84□□□□□ -1.47
SCAF11-213ENST00000550629 DEC1Q9P2X7 70 aa5.84□□□□□ -1.47
SCAF11-213ENST00000550629 PACSIN2Q9UNF0 486 aaPredicted RBP5.84□□□□□ -1.47
SCAF11-213ENST00000550629 OR51B4Q9Y5P0 310 aa5.84□□□□□ -1.47
SCAF11-213ENST00000550629 SNX10Q9Y5X0 201 aa5.84□□□□□ -1.47
SCAF11-213ENST00000550629 SAR1BQ9Y6B6 198 aa5.84□□□□□ -1.47
SCAF11-213ENST00000550629 UNC80Q8N2C7 3258 aa5.83□□□□□ -1.48
SCAF11-213ENST00000550629 ZSCAN5CA6NGD5 496 aaPredicted RBP5.83□□□□□ -1.48
SCAF11-213ENST00000550629 ARHGAP42A6NI28 874 aa5.83□□□□□ -1.48
SCAF11-213ENST00000550629 HACD1B0YJ81 288 aa5.83□□□□□ -1.48
SCAF11-213ENST00000550629 SPECC1L-ADORA2AF8WAN1 911 aa5.83□□□□□ -1.48
SCAF11-213ENST00000550629 APOC4-APOC2K7ER74 178 aa5.83□□□□□ -1.48
SCAF11-213ENST00000550629 PGRMC1O00264 195 aaKnown RBP5.83□□□□□ -1.48
SCAF11-213ENST00000550629 TRDMT1O14717 391 aaKnown RBP5.83□□□□□ -1.48
SCAF11-213ENST00000550629 MTSS1O43312 755 aa5.83□□□□□ -1.48
SCAF11-213ENST00000550629 CEP104O60308 925 aa5.83□□□□□ -1.48
SCAF11-213ENST00000550629 CST8O60676 142 aa5.83□□□□□ -1.48
SCAF11-213ENST00000550629 CNTN5O94779 1100 aa5.83□□□□□ -1.48
SCAF11-213ENST00000550629 APOC2P02655 101 aa5.83□□□□□ -1.48
SCAF11-213ENST00000550629 RHOCP08134 193 aa5.83□□□□□ -1.48
SCAF11-213ENST00000550629 CISD3P0C7P0 127 aa5.83□□□□□ -1.48
SCAF11-213ENST00000550629 DRD1P21728 446 aa5.83□□□□□ -1.48
SCAF11-213ENST00000550629 OPRD1P41143 372 aa5.83□□□□□ -1.48
SCAF11-213ENST00000550629 TNFRSF4P43489 277 aa5.83□□□□□ -1.48
SCAF11-213ENST00000550629 SGSHP51688 502 aa5.83□□□□□ -1.48
SCAF11-213ENST00000550629 IL2P60568 153 aa5.83□□□□□ -1.48
SCAF11-213ENST00000550629 SLC20A2Q08357 652 aa5.83□□□□□ -1.48
SCAF11-213ENST00000550629 GALNT2Q10471 571 aa5.83□□□□□ -1.48
SCAF11-213ENST00000550629 GRSF1Q12849 480 aaKnown RBP eCLIP5.83□□□□□ -1.48
SCAF11-213ENST00000550629 KLF10Q13118 480 aa5.83□□□□□ -1.48
SCAF11-213ENST00000550629 KLF1Q13351 362 aaPredicted RBP5.83□□□□□ -1.48
SCAF11-213ENST00000550629 XRCC4Q13426 336 aa5.83□□□□□ -1.48
SCAF11-213ENST00000550629 POLD3Q15054 466 aaPredicted RBP5.83□□□□□ -1.48
SCAF11-213ENST00000550629 PDK1Q15118 436 aa5.83□□□□□ -1.48
SCAF11-213ENST00000550629 NRN1LQ496H8 165 aa5.83□□□□□ -1.48
SCAF11-213ENST00000550629 SLC44A4Q53GD3 710 aa5.83□□□□□ -1.48
SCAF11-213ENST00000550629 TMEM196Q5HYL7 178 aa5.83□□□□□ -1.48
SCAF11-213ENST00000550629 NCBP2-AS2Q69YL0 99 aa5.83□□□□□ -1.48
SCAF11-213ENST00000550629 RETSATQ6NUM9 610 aa5.83□□□□□ -1.48
SCAF11-213ENST00000550629 ANKS1BQ7Z6G8 1248 aa5.83□□□□□ -1.48
SCAF11-213ENST00000550629 TFAP2DQ7Z6R9 452 aa5.83□□□□□ -1.48
SCAF11-213ENST00000550629 ADGRE4PQ86SQ3 457 aa5.83□□□□□ -1.48
SCAF11-213ENST00000550629 SLC13A5Q86YT5 568 aaPredicted RBP5.83□□□□□ -1.48
SCAF11-213ENST00000550629 RFX6Q8HWS3 928 aa5.83□□□□□ -1.48
SCAF11-213ENST00000550629 D2HGDHQ8N465 521 aa5.83□□□□□ -1.48
SCAF11-213ENST00000550629 CARNMT1Q8N4J0 409 aa5.83□□□□□ -1.48
SCAF11-213ENST00000550629 NPWQ8N729 165 aa5.83□□□□□ -1.48
SCAF11-213ENST00000550629 DCAF4L2Q8NA75 395 aa5.83□□□□□ -1.48
SCAF11-213ENST00000550629 OR2W6PQ8NHA6 318 aa5.83□□□□□ -1.48
SCAF11-213ENST00000550629 KIF18AQ8NI77 898 aa5.83□□□□□ -1.48
SCAF11-213ENST00000550629 CASKIN2Q8WXE0 1202 aa5.83□□□□□ -1.48
SCAF11-213ENST00000550629 P3H4Q92791 437 aa5.83□□□□□ -1.48
SCAF11-213ENST00000550629 TTC17Q96AE7 1141 aa5.83□□□□□ -1.48
SCAF11-213ENST00000550629 ALG14Q96F25 216 aa5.83□□□□□ -1.48
SCAF11-213ENST00000550629 P2RY11Q96G91 374 aa5.83□□□□□ -1.48
SCAF11-213ENST00000550629 ZNF599Q96NL3 588 aa5.83□□□□□ -1.48
SCAF11-213ENST00000550629 TSGA13Q96PP4 275 aa5.83□□□□□ -1.48
SCAF11-213ENST00000550629 PNKPQ96T60 521 aa5.83□□□□□ -1.48
SCAF11-213ENST00000550629 NELL2Q99435 816 aa5.83□□□□□ -1.48
SCAF11-213ENST00000550629 P2RY13Q9BPV8 354 aa5.83□□□□□ -1.48
SCAF11-213ENST00000550629 SOX7Q9BT81 388 aa5.83□□□□□ -1.48
SCAF11-213ENST00000550629 ACE2Q9BYF1 805 aaPredicted RBP5.83□□□□□ -1.48
SCAF11-213ENST00000550629 MAGEB5Q9BZ81 275 aa5.83□□□□□ -1.48
SCAF11-213ENST00000550629 MS4A5Q9H3V2 200 aa5.83□□□□□ -1.48
SCAF11-213ENST00000550629 ABCB8Q9NUT2 735 aa5.83□□□□□ -1.48
SCAF11-213ENST00000550629 DNAJC17Q9NVM6 304 aaKnown RBP5.83□□□□□ -1.48
SCAF11-213ENST00000550629 HAUS2Q9NVX0 235 aa5.83□□□□□ -1.48
SCAF11-213ENST00000550629 GGA2Q9UJY4 613 aa5.83□□□□□ -1.48
SCAF11-213ENST00000550629 VPS28Q9UK41 221 aa5.83□□□□□ -1.48
SCAF11-213ENST00000550629 HPCAL4Q9UM19 191 aa5.83□□□□□ -1.48
SCAF11-213ENST00000550629 MRPS17Q9Y2R5 130 aaKnown RBP5.83□□□□□ -1.48
SCAF11-213ENST00000550629 PIAS3Q9Y6X2 628 aa5.83□□□□□ -1.48
SCAF11-213ENST00000550629 COL4A2P08572 1712 aa5.82□□□□□ -1.48
SCAF11-213ENST00000550629 DOCK6Q96HP0 2047 aa5.82□□□□□ -1.48
SCAF11-213ENST00000550629 GOLGA6L10A0A0M3HER8 536 aa5.82□□□□□ -1.48
SCAF11-213ENST00000550629 RASA4BC9J798 803 aa5.82□□□□□ -1.48
SCAF11-213ENST00000550629 RASA4O43374 803 aa5.82□□□□□ -1.48
SCAF11-213ENST00000550629 KDELR3O43731 214 aa5.82□□□□□ -1.48
SCAF11-213ENST00000550629 NARSO43776 548 aaKnown RBP5.82□□□□□ -1.48
SCAF11-213ENST00000550629 PRAMEF11O60813 436 aa5.82□□□□□ -1.48
SCAF11-213ENST00000550629 PCDH8O95206 1070 aa5.82□□□□□ -1.48
SCAF11-213ENST00000550629 KAT7O95251 611 aa5.82□□□□□ -1.48
SCAF11-213ENST00000550629 FKBP9O95302 570 aa5.82□□□□□ -1.48
SCAF11-213ENST00000550629 FGGP02679 453 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms